##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063919_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2002616 Sequences flagged as poor quality 0 Sequence length 50 %GC 37 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35841419423394 32.0 32.0 32.0 32.0 32.0 2 31.54792830977082 32.0 32.0 32.0 32.0 32.0 3 31.590741809712895 32.0 32.0 32.0 32.0 32.0 4 31.64962978424221 32.0 32.0 32.0 32.0 32.0 5 31.64228039724041 32.0 32.0 32.0 32.0 32.0 6 35.25943915358711 36.0 36.0 36.0 36.0 36.0 7 35.28097748145426 36.0 36.0 36.0 36.0 36.0 8 35.22746697319906 36.0 36.0 36.0 36.0 36.0 9 35.31595672859899 36.0 36.0 36.0 36.0 36.0 10 35.22375233194981 36.0 36.0 36.0 36.0 36.0 11 35.30730754173541 36.0 36.0 36.0 36.0 36.0 12 35.26309836733552 36.0 36.0 36.0 36.0 36.0 13 35.278406843848245 36.0 36.0 36.0 36.0 36.0 14 35.24600322777807 36.0 36.0 36.0 36.0 36.0 15 35.2177212206434 36.0 36.0 36.0 36.0 36.0 16 35.24889344737084 36.0 36.0 36.0 36.0 36.0 17 35.259587958949695 36.0 36.0 36.0 36.0 36.0 18 35.25464142901085 36.0 36.0 36.0 36.0 36.0 19 35.18992557734483 36.0 36.0 36.0 36.0 36.0 20 35.17743092035617 36.0 36.0 36.0 36.0 36.0 21 35.1374067719423 36.0 36.0 36.0 36.0 36.0 22 35.09905144071554 36.0 36.0 36.0 36.0 36.0 23 35.11777544971178 36.0 36.0 36.0 36.0 36.0 24 35.094823970246914 36.0 36.0 36.0 36.0 36.0 25 35.050825520219554 36.0 36.0 36.0 36.0 36.0 26 35.020018316042616 36.0 36.0 36.0 36.0 36.0 27 34.941400148605624 36.0 36.0 36.0 36.0 36.0 28 34.86054940138299 36.0 36.0 36.0 36.0 36.0 29 34.83989541679483 36.0 36.0 36.0 36.0 36.0 30 34.75153649027072 36.0 36.0 36.0 32.0 36.0 31 34.75325923691811 36.0 36.0 36.0 32.0 36.0 32 34.708326508926326 36.0 36.0 36.0 32.0 36.0 33 34.78088610097992 36.0 36.0 36.0 36.0 36.0 34 34.75407267294379 36.0 36.0 36.0 36.0 36.0 35 34.73447680433992 36.0 36.0 36.0 36.0 36.0 36 34.63657136465503 36.0 36.0 36.0 32.0 36.0 37 34.5144495999233 36.0 36.0 36.0 32.0 36.0 38 34.445250612199246 36.0 36.0 36.0 32.0 36.0 39 34.20180453966212 36.0 36.0 36.0 32.0 36.0 40 34.34348122655567 36.0 36.0 36.0 32.0 36.0 41 34.32851280525073 36.0 36.0 36.0 32.0 36.0 42 34.32758052467373 36.0 36.0 36.0 32.0 36.0 43 34.35209346175203 36.0 36.0 36.0 32.0 36.0 44 34.17574512537601 36.0 36.0 36.0 32.0 36.0 45 34.15597098994515 36.0 36.0 36.0 32.0 36.0 46 33.88935472402098 36.0 36.0 36.0 32.0 36.0 47 33.946028095251414 36.0 36.0 36.0 32.0 36.0 48 33.860203853359806 36.0 36.0 36.0 32.0 36.0 49 33.79332632916146 36.0 36.0 36.0 27.0 36.0 50 33.39912094979766 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 1.0 19 6.0 20 10.0 21 28.0 22 121.0 23 366.0 24 1050.0 25 2683.0 26 6231.0 27 12236.0 28 21913.0 29 34070.0 30 50165.0 31 71721.0 32 103271.0 33 165288.0 34 335542.0 35 1197912.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.85176055564323 20.890954817032853 12.882509103911435 26.374775523412485 2 9.427951237610536 20.949970763139483 52.169944307650674 17.452133691599307 3 19.5868489555375 26.809277297765068 30.870779068704874 22.733094677992558 4 9.54751185449432 18.191056098623 41.923963455799814 30.33746859108286 5 8.522652370699126 43.08499482676659 37.930936335273465 10.461416467260824 6 28.96965907973049 41.22442274053497 18.937046622680715 10.868871557053824 7 25.508947051729862 32.35939009744759 22.871295780766648 19.260367070055903 8 19.81972579865536 49.0913385292038 19.32102809525141 11.76790757688943 9 26.644292352818393 14.122932556474252 21.054392452988473 38.178382637718876 10 15.013557443111173 30.69010631232554 36.60684413684279 17.689492107720504 11 33.46128264230387 19.08938108953489 31.88489455791824 15.564441710243 12 27.28523819368086 22.6190369187472 36.6446055006107 13.451119386961242 13 32.43242298527317 24.26645507549171 26.215567331334604 17.085554607900512 14 16.69709359576393 28.504922571122115 27.536137804027938 27.261846029086012 15 17.798889907042824 45.192468546117794 21.69075696554617 15.317884581293212 16 15.341225724107213 27.920996862085563 39.692170793626694 17.045606620180525 17 15.947440747502267 34.06484318511387 32.96777814618479 17.019937921199073 18 15.997822841192244 27.506504012263992 42.78416666250543 13.71150648403833 19 24.948417469949305 24.250330567617556 27.89306586984225 22.908186092590892 20 24.01762316038414 30.822504034770937 31.290996868058997 13.868875936785926 21 19.672718084745153 26.908903154673684 27.010270566099543 26.408108194481617 22 22.350215917579806 35.60572770815773 27.740465471163716 14.303590903098748 23 17.12508601292516 35.016623339788254 31.60112373577229 16.257166911514297 24 24.553979826225905 27.553929891141514 33.082442824328375 14.809647458304203 25 19.767949345344505 32.20485573610043 33.02250097374387 15.004693944811192 26 13.258233836820892 34.999767790146215 35.62688420818188 16.11511416485102 27 15.867022493175941 33.56802635140331 33.14944413760178 17.415507017818957 28 14.916642322279733 35.25731392773587 28.732918355168373 21.09312539481602 29 19.033277887664845 28.827336595489477 27.73982914877499 24.399556368070684 30 15.338781103123445 30.666626051418906 32.21886092207266 21.775731923384996 31 22.874398801072882 27.050019051595115 30.814094884434475 19.261487262897532 32 17.389780199586127 33.98826692447207 31.09115205458657 17.530800821355236 33 15.304942814639332 34.43550960463376 35.35095477055694 14.90859281016997 34 17.886935214134372 33.35930021257886 34.447112707741276 14.306651865545497 35 15.599207807668645 35.22484399843399 33.43487084428607 15.741077349611293 36 14.19872846462428 32.53681345104849 35.80554128145317 17.458916802874064 37 15.499611991606635 32.20744316950424 28.85573977770165 23.437205061187473 38 18.364522828932945 36.82702626849184 28.066850542613825 16.741600359961385 39 22.19636587354814 28.42297968007263 30.410228727146887 18.970425719232345 40 24.762703739213805 28.810672339405563 31.997193592201985 14.429430329178652 41 23.12800056728012 25.841407254194426 35.311639529437144 15.718952649088308 42 18.905749394779527 35.20979977788608 32.1867934100878 13.697657417246587 43 14.399146302976554 35.902913435840894 34.2442064852211 15.453733775961458 44 14.047308735187933 35.0158045331296 31.7550771750583 19.18180955662417 45 14.756662257370094 35.471667398220404 31.33871337425041 18.432956970159097 46 17.469576897917197 28.301799170074755 31.783490379957957 22.445133552050095 47 23.35282156582322 29.177868904850552 30.036463035610133 17.432846493716095 48 15.780275005792538 31.40160473310376 29.873373095453054 22.944747165650643 49 21.114480061440066 29.220783760327812 30.089703296011887 19.57503288222023 50 16.422034199608905 36.88362505467902 27.579551741839094 19.11478900387297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 20.0 1 26.0 2 32.0 3 75.5 4 119.0 5 174.5 6 230.0 7 263.0 8 296.0 9 421.5 10 547.0 11 848.5 12 1150.0 13 2162.0 14 3174.0 15 4500.5 16 5827.0 17 6900.0 18 7973.0 19 8481.0 20 8989.0 21 10179.5 22 11370.0 23 13254.0 24 15138.0 25 20891.5 26 26645.0 27 44683.0 28 62721.0 29 83866.5 30 105012.0 31 130502.0 32 155992.0 33 201179.0 34 246366.0 35 293247.5 36 340129.0 37 325260.5 38 310392.0 39 263757.0 40 217122.0 41 176842.5 42 136563.0 43 108176.0 44 79789.0 45 68703.5 46 57618.0 47 52327.0 48 47036.0 49 42470.5 50 37905.0 51 35149.5 52 32394.0 53 28886.0 54 25378.0 55 22547.0 56 19716.0 57 17703.5 58 15691.0 59 13344.0 60 10997.0 61 9149.0 62 7301.0 63 5890.0 64 4479.0 65 3916.0 66 3353.0 67 2837.0 68 2321.0 69 1859.0 70 1397.0 71 941.0 72 485.0 73 410.0 74 335.0 75 307.5 76 280.0 77 218.0 78 156.0 79 125.0 80 94.0 81 64.0 82 34.0 83 29.5 84 25.0 85 14.5 86 4.0 87 2.5 88 1.0 89 3.5 90 6.0 91 5.0 92 4.0 93 3.5 94 3.0 95 4.5 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008988243377662018 2 3.4954279802018964E-4 3 3.4954279802018964E-4 4 0.0 5 0.0 6 3.4954279802018964E-4 7 4.993468543145565E-5 8 0.0 9 0.0010985630794920244 10 0.001298301821217847 11 0.0 12 9.98693708629113E-5 13 5.992162251774679E-4 14 1.997387417258226E-4 15 0.004044709519947908 16 5.992162251774679E-4 17 0.0 18 2.9960811258873394E-4 19 0.0 20 0.0011984324503549358 21 0.0 22 0.0 23 4.993468543145566E-4 24 7.989549669032904E-4 25 0.0017976486755324037 26 0.005842358195480312 27 0.007090725331266703 28 0.005043403228577021 29 0.002746407698730061 30 0.004194513576242276 31 0.00793961498360145 32 0.0035952973510648073 33 0.004643925745125376 34 0.003245754553044618 35 0.0035952973510648073 36 0.007739876241875627 37 0.004094644205379364 38 0.008938308692230562 39 0.00494353385771411 40 0.002796342384161517 41 0.003894905463653541 42 0.0019973874172582264 43 0.001597909933806581 44 0.001298301821217847 45 0.001448105877512214 46 0.001298301821217847 47 0.0019973874172582264 48 0.0019973874172582264 49 6.990855960403793E-4 50 9.986937086291132E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2002616.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.2288251077914 #Duplication Level Percentage of deduplicated Percentage of total 1 73.56608870216415 32.53741671072288 2 14.145104466778335 12.512427031851562 3 5.022955755812092 6.664782949439616 4 2.3368641335386737 4.1342702025181 5 1.2816371931738535 2.8342653634263515 6 0.7744714438871052 2.0552377225596876 7 0.5124729548155464 1.5866253683706921 8 0.3597892242264952 1.273044373918528 9 0.26119132375995185 1.0396966840426287 >10 1.492075399155012 12.197551678417943 >50 0.1308797113374628 3.9997084864485535 >100 0.10031975666484683 8.685847726469293 >500 0.009894678293827364 3.063158458797038 >1k 0.005686596720590438 5.154174699436402 >5k 4.5492773764723506E-4 1.6549456161330578 >10k+ 1.1373193441180876E-4 0.6068469274476964 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 12064 0.6024120450450811 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 9207 0.4597486487674122 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 8913 0.44506785125056425 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 8904 0.4446184390816812 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 5876 0.2934162115952334 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 4711 0.23524230306758762 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 4574 0.22840125116347815 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 4139 0.20667966300079496 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 3696 0.1845585973546601 No Hit GTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGATAAAAACCAC 3577 0.17861636978831688 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 3452 0.1723745341093849 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 3301 0.1648343966092351 No Hit GTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGATAAAAACCAC 3246 0.16208798891050508 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 3131 0.15634550008588766 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2968 0.14820614636056037 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 2697 0.1346738466086359 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 2612 0.13042939834696218 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAGAAACATGGAAAATGA 2380 0.11884455132686446 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 2272 0.11345160530026725 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 2234 0.11155408725387193 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAG 2151 0.10740950836306111 No Hit ACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACAC 2136 0.10666048808158927 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 2106 0.1051624475186456 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATT 2104 0.1050625781477827 No Hit GACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACA 2091 0.10441342723717377 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAG 2059 0.1028155173033672 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 4.993468543145565E-5 0.0 11 0.0 0.0 0.0 4.993468543145565E-5 0.0 12 0.0 0.0 0.0 4.993468543145565E-5 0.0 13 0.0 0.0 0.0 4.993468543145565E-5 0.0 14 0.0 0.0 0.0 4.993468543145565E-5 0.0 15 0.0 0.0 0.0 4.993468543145565E-5 0.0 16 0.0 0.0 0.0 4.993468543145565E-5 0.0 17 0.0 0.0 0.0 4.993468543145565E-5 0.0 18 0.0 0.0 0.0 9.98693708629113E-5 0.0 19 0.0 0.0 0.0 9.98693708629113E-5 0.0 20 0.0 0.0 0.0 1.4980405629436697E-4 0.0 21 0.0 0.0 0.0 1.997387417258226E-4 0.0 22 0.0 0.0 0.0 4.993468543145566E-4 0.0 23 0.0 0.0 0.0 8.988243377662018E-4 0.0 24 0.0 0.0 0.0 0.0016977793046694923 0.0 25 0.0 0.0 0.0 0.00229699552984696 0.0 26 0.0 0.0 0.0 0.0026465383278671496 0.0 27 0.0 0.0 0.0 0.0032457545530446175 0.0 28 0.0 0.0 0.0 0.00494353385771411 0.0 29 0.0 0.0 0.0 0.00793961498360145 0.0 30 0.0 0.0 0.0 0.0167780543049691 0.0 31 0.0 0.0 0.0 0.0397480096034387 0.0 32 0.0 0.0 0.0 0.06960895149144919 0.0 33 0.0 0.0 0.0 0.09372740455484227 0.0 34 0.0 0.0 0.0 0.12463697483691331 0.0 35 0.0 0.0 0.0 0.15659517351304494 0.0 36 0.0 0.0 0.0 0.20068750074902028 0.0 37 0.0 0.0 0.0 0.2842282294758456 0.0 38 0.0 0.0 0.0 0.3825995597758132 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 4400 0.0 30.447012 4 GACGTGT 175 0.0 26.397408 7 CCTAGAG 655 0.0 25.188995 3 GTCCTAG 735 0.0 25.143528 1 GGACCTG 8295 0.0 24.716078 6 AGGACCT 8540 0.0 24.496426 5 GACGTTA 90 1.5154E-8 24.442045 7 TATAGGA 755 0.0 24.18366 2 GTGCGTA 55 1.5951894E-4 23.997643 9 TACGGCG 130 1.8189894E-12 23.691164 16 CTGTAGG 14080 0.0 23.297497 1 TGTAGGA 14450 0.0 23.170624 2 CGTGTAA 175 0.0 22.62635 9 CTAGAGT 780 0.0 22.561888 4 GTCGAGG 440 0.0 22.498354 19 GTAAGAC 235 0.0 22.466442 3 TAGAGTG 785 0.0 22.41818 5 ATAGGAC 775 0.0 22.140314 3 ACTGTTC 3425 0.0 22.029955 8 GTAGGAC 14845 0.0 22.020618 3 >>END_MODULE