##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063918_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 872520 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.23343304451474 32.0 32.0 32.0 32.0 32.0 2 31.373009214688487 32.0 32.0 32.0 32.0 32.0 3 31.469075780497867 32.0 32.0 32.0 32.0 32.0 4 31.557517306193553 32.0 32.0 32.0 32.0 32.0 5 31.497948471095217 32.0 32.0 32.0 32.0 32.0 6 35.077257827900794 36.0 36.0 36.0 36.0 36.0 7 35.109714390501075 36.0 36.0 36.0 36.0 36.0 8 35.05035300050429 36.0 36.0 36.0 36.0 36.0 9 35.15918374363911 36.0 36.0 36.0 36.0 36.0 10 35.016916517672946 36.0 36.0 36.0 36.0 36.0 11 35.16207422179434 36.0 36.0 36.0 36.0 36.0 12 35.07662746985743 36.0 36.0 36.0 36.0 36.0 13 35.117701599963326 36.0 36.0 36.0 36.0 36.0 14 35.061674230963185 36.0 36.0 36.0 36.0 36.0 15 35.027818273506625 36.0 36.0 36.0 36.0 36.0 16 35.04562302296795 36.0 36.0 36.0 36.0 36.0 17 35.014095951955255 36.0 36.0 36.0 36.0 36.0 18 35.00459588318893 36.0 36.0 36.0 36.0 36.0 19 35.00203433732178 36.0 36.0 36.0 36.0 36.0 20 34.99479553477284 36.0 36.0 36.0 36.0 36.0 21 34.98715903360382 36.0 36.0 36.0 36.0 36.0 22 34.97056113326915 36.0 36.0 36.0 36.0 36.0 23 34.919570898088296 36.0 36.0 36.0 36.0 36.0 24 34.908502956952276 36.0 36.0 36.0 32.0 36.0 25 34.8719490670701 36.0 36.0 36.0 32.0 36.0 26 34.81991014532618 36.0 36.0 36.0 32.0 36.0 27 34.79832324760464 36.0 36.0 36.0 32.0 36.0 28 34.77090381882364 36.0 36.0 36.0 32.0 36.0 29 34.737807729335714 36.0 36.0 36.0 32.0 36.0 30 34.71722482006143 36.0 36.0 36.0 32.0 36.0 31 34.71653944895246 36.0 36.0 36.0 32.0 36.0 32 34.662217484986016 36.0 36.0 36.0 32.0 36.0 33 34.623532984917254 36.0 36.0 36.0 32.0 36.0 34 34.59604937422638 36.0 36.0 36.0 32.0 36.0 35 34.56187479943153 36.0 36.0 36.0 32.0 36.0 36 34.5262561316646 36.0 36.0 36.0 32.0 36.0 37 34.49730321367991 36.0 36.0 36.0 32.0 36.0 38 34.45014899371934 36.0 36.0 36.0 32.0 36.0 39 34.42043735387154 36.0 36.0 36.0 32.0 36.0 40 34.41313207720167 36.0 36.0 36.0 32.0 36.0 41 34.38906729931692 36.0 36.0 36.0 32.0 36.0 42 34.32125796543346 36.0 36.0 36.0 32.0 36.0 43 34.307082932196394 36.0 36.0 36.0 32.0 36.0 44 34.225730069224774 36.0 36.0 36.0 32.0 36.0 45 34.172365103378716 36.0 36.0 36.0 32.0 36.0 46 34.11844427634897 36.0 36.0 36.0 32.0 36.0 47 34.07395475175354 36.0 36.0 36.0 32.0 36.0 48 34.00631274927795 36.0 36.0 36.0 32.0 36.0 49 33.95983129326548 36.0 36.0 36.0 32.0 36.0 50 33.38960482281208 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 0.0 19 1.0 20 11.0 21 29.0 22 88.0 23 300.0 24 747.0 25 1811.0 26 3587.0 27 6665.0 28 10872.0 29 16096.0 30 23102.0 31 32374.0 32 46893.0 33 74852.0 34 153653.0 35 501438.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.75103877124108 18.266555864400953 12.025331690403187 25.957073673954785 2 15.102725674427347 20.89366637708334 38.89020054600593 25.11340740248339 3 18.301941286901986 25.47913271305675 28.908189438794107 27.310736561247158 4 11.81760876541512 16.642827671572 36.55881813597396 34.980745427038926 5 13.367945720441938 38.0518498143309 33.74742126254986 14.832783202677302 6 32.973800027506535 36.50254435428415 17.36177967267226 13.161875945537066 7 29.201379457363007 30.938537587233256 21.282336046174457 18.577746909229276 8 27.240407096685466 34.42259203227433 19.560239306835374 18.776761564204833 9 27.63588143132376 14.229341426487121 18.671254213433244 39.46352292875587 10 15.716424034456752 27.379274143452136 32.260685788422876 24.643616033668227 11 36.40260395177188 21.205129968367487 23.615275294549125 18.77699078531151 12 24.99014349241278 23.81504148902031 29.979713932058864 21.215101086508046 13 29.9261790887742 20.178861844525667 25.53474602787109 24.36021303882904 14 22.997947317931914 20.598223301093274 25.970726071812926 30.433103309161886 15 24.277889273871974 28.794111478010308 22.957396011585406 23.97060323653231 16 24.25757042636907 26.176867348915252 25.73710010349487 23.828462121220802 17 22.816325127217716 26.71686608902948 26.345413285655344 24.121395498097463 18 23.43928721241281 25.49815591196972 28.34336942045895 22.71918745515852 19 25.19326226706811 24.865934151577214 26.371803937793903 23.56899964356077 20 25.3359266118976 24.95071701019585 26.454650480451846 23.258705897454707 21 25.951611424379955 24.369641956631366 25.509673130701877 24.169073488286802 22 25.251599105578215 25.36185458425547 25.906026115190617 23.480520194975696 23 23.574898827186175 25.323403440849862 26.774492645988555 24.327205085975404 24 24.487716543555123 25.30351913720681 26.80698899159327 23.401775327644796 25 24.087280029157526 25.29633169895312 26.963261975330717 23.653126296558632 26 23.353804045085997 26.238844837506566 27.26455816043261 23.142792956974827 27 23.935556266197185 25.736459698023157 26.501431025925807 23.82655300985385 28 23.321142073828373 25.845431945378877 26.701723701206788 24.131702279585962 29 23.6857517808125 25.331033415664272 26.408403486552935 24.574811316970298 30 23.147913612664457 25.892933893722443 26.99346352790694 23.965688965706157 31 24.4174757837958 25.34531946133488 25.9960135388382 24.241191216031122 32 23.60264393624203 26.12027457142628 26.139529872651394 24.13755161968029 33 23.441022649255743 25.728412947474954 26.854743781798764 23.975820621470547 34 24.05472129321233 25.75238339747895 26.863909665854436 23.32898564345428 35 24.119280639360365 25.833326647541483 26.876997857872293 23.17039485522586 36 23.281283849071396 26.240229975963935 26.480705241283342 23.997780933681323 37 23.981578905141447 26.128223290443998 25.834118453416586 24.056079350997962 38 23.728574605190463 26.481982839052502 26.04356028911818 23.74588226663885 39 24.48695157831517 25.66267918728316 25.796894144399708 24.05347509000196 40 24.819426520175405 25.87077563501578 26.354673592374994 22.955124252433816 41 23.873112876679674 25.852386039069696 26.972396308504837 23.302104775745793 42 24.468400899016515 26.841786159225865 26.115833762173228 22.573979179584395 43 23.56170538068948 26.08912916657593 26.5873475230628 23.761817929671786 44 23.289906946731904 26.526886193984943 25.930675945632775 24.25253091365037 45 23.29835371136998 26.621188573629123 26.059130689919176 24.021327025081717 46 23.45856164893818 25.805002332343474 25.948266673390542 24.788169345327805 47 24.310744195695353 25.88094656842014 26.0637548008651 23.74455443501941 48 24.224329314627 26.385468015582752 25.23040035392429 24.159802315865964 49 23.860334779344768 26.4612069706538 25.54752640355753 24.1309318464439 50 23.693765558596596 27.16020941928326 25.122520366575436 24.023504655544706 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 132.0 1 84.0 2 36.0 3 120.0 4 204.0 5 209.0 6 214.0 7 215.5 8 217.0 9 342.0 10 467.0 11 650.0 12 833.0 13 1493.0 14 2153.0 15 2910.5 16 3668.0 17 4064.5 18 4461.0 19 4503.5 20 4546.0 21 4738.5 22 4931.0 23 5477.0 24 6023.0 25 6365.0 26 6707.0 27 8531.0 28 10355.0 29 12763.0 30 15171.0 31 17850.0 32 20529.0 33 24669.0 34 28809.0 35 33126.5 36 37444.0 37 40150.5 38 42857.0 39 43376.5 40 43896.0 41 44919.0 42 45942.0 43 46328.5 44 46715.0 45 50409.0 46 54103.0 47 56651.0 48 59199.0 49 60289.0 50 61379.0 51 59523.0 52 57667.0 53 56923.5 54 56180.0 55 55807.0 56 55434.0 57 54057.5 58 52681.0 59 47992.5 60 43304.0 61 37874.5 62 32445.0 63 28006.5 64 23568.0 65 20039.0 66 16510.0 67 13977.0 68 11444.0 69 10133.0 70 8822.0 71 6872.5 72 4923.0 73 4139.0 74 3355.0 75 2589.5 76 1824.0 77 1565.0 78 1306.0 79 1067.5 80 829.0 81 687.0 82 545.0 83 450.5 84 356.0 85 262.5 86 169.0 87 113.5 88 58.0 89 46.0 90 34.0 91 25.5 92 17.0 93 15.5 94 14.0 95 18.0 96 22.0 97 16.5 98 11.0 99 11.0 100 11.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010888002567276395 2 2.2922110667950306E-4 3 6.876633200385092E-4 4 0.0 5 0.0 6 0.0 7 3.438316600192546E-4 8 0.0 9 0.0014899371934167698 10 6.876633200385092E-4 11 0.0 12 0.0 13 3.438316600192546E-4 14 3.438316600192546E-4 15 0.004928253793609316 16 0.0014899371934167698 17 0.0 18 2.2922110667950306E-4 19 1.1461055333975153E-4 20 9.168844267180122E-4 21 0.0 22 1.1461055333975153E-4 23 3.438316600192546E-4 24 5.730527666987575E-4 25 0.0020629899601155278 26 0.006188969880346582 27 0.007908128180442855 28 0.0042405904735708065 29 0.002865263833493788 30 0.003552927153532297 31 0.007678907073763353 32 0.0037821482602118 33 0.004699032686929812 34 0.0029798743868335396 35 0.0026360427268142853 36 0.009283454820519874 37 0.004813643240269564 38 0.008481180947141613 39 0.004469811580250309 40 0.0025214321734745334 41 0.003209095493513043 42 0.0012607160867372667 43 0.0012607160867372667 44 0.0010314949800577639 45 0.0013753266400770184 46 8.022738733782607E-4 47 0.002406821620134782 48 0.001948379406775776 49 5.730527666987575E-4 50 0.0013753266400770184 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 872520.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.18582492726002 #Duplication Level Percentage of deduplicated Percentage of total 1 76.34354193267923 45.184555071544864 2 14.396263061260067 17.041094103010373 3 4.496027917183857 7.983033635235519 4 1.859497241845282 4.40223512834311 5 0.9177045968226536 2.715755180124366 6 0.5124801101964085 1.8198934848472532 7 0.30134332010924597 1.2484677090889578 8 0.20609803024547363 0.9758465548769394 9 0.1406123369307545 0.7490031440576881 >10 0.6960562946024689 7.460491721129932 >50 0.0684054694519669 2.832273293868176 >100 0.058851716955648635 6.442166623251959 >500 0.00311797171698028 1.1451843506208803 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 950 0.10888002567276393 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 948 0.10865080456608443 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 1.1461055333975153E-4 12 0.0 0.0 0.0 0.0 2.2922110667950306E-4 13 0.0 0.0 0.0 0.0 3.438316600192546E-4 14 0.0 0.0 0.0 0.0 3.438316600192546E-4 15 0.0 0.0 0.0 0.0 3.438316600192546E-4 16 0.0 0.0 0.0 3.438316600192546E-4 3.438316600192546E-4 17 0.0 0.0 0.0 3.438316600192546E-4 3.438316600192546E-4 18 0.0 0.0 0.0 3.438316600192546E-4 3.438316600192546E-4 19 0.0 0.0 0.0 5.730527666987577E-4 3.438316600192546E-4 20 0.0 0.0 0.0 5.730527666987577E-4 4.584422133590061E-4 21 0.0 0.0 0.0 9.168844267180122E-4 4.584422133590061E-4 22 0.0 0.0 0.0 0.0011461055333975153 4.584422133590061E-4 23 0.0 0.0 0.0 0.002406821620134782 4.584422133590061E-4 24 0.0 0.0 0.0 0.003552927153532297 4.584422133590061E-4 25 0.0 0.0 0.0 0.004699032686929812 4.584422133590061E-4 26 0.0 0.0 0.0 0.0055013065603080735 4.584422133590061E-4 27 0.0 0.0 0.0 0.007105854307064594 4.584422133590061E-4 28 0.0 0.0 0.0 0.010314949800577638 4.584422133590061E-4 29 0.0 0.0 0.0 0.016618530234263972 4.584422133590061E-4 30 0.0 0.0 0.0 0.02773575390821987 4.584422133590061E-4 31 0.0 0.0 0.0 0.056044560583138496 4.584422133590061E-4 32 0.0 0.0 0.0 0.08125888231788383 4.584422133590061E-4 33 0.0 0.0 0.0 0.10555631962591115 4.584422133590061E-4 34 0.0 0.0 0.0 0.13317746298079128 6.876633200385092E-4 35 0.0 0.0 0.0 0.16515380736258195 6.876633200385092E-4 36 0.0 0.0 0.0 0.20950809150506577 6.876633200385092E-4 37 0.0 0.0 0.0 0.2775867601888782 6.876633200385092E-4 38 0.0 0.0 0.0 0.36961903452069866 8.022738733782607E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGGCG 30 0.005742502 29.335054 30 CAGTTCG 30 0.0057457197 29.331692 9 ACGCATG 45 0.0013983584 24.443075 16 GTATTAG 215 0.0 22.512947 1 CCGTCGT 145 1.2732926E-11 21.24019 9 CGAGCCG 180 0.0 20.776613 15 CGTCGTA 165 3.6379788E-12 19.99888 10 ATACCGT 170 5.456968E-12 19.411789 6 TGTAGGA 930 0.0 19.161316 2 GTAGGAC 960 0.0 19.02086 3 GTCCTAC 845 0.0 18.74666 1 GTCCTAA 485 0.0 18.599028 1 TCCTACA 910 0.0 18.37365 2 ATTTCGT 360 0.0 18.333357 42 GTTCGCA 60 0.0074128835 18.332308 9 AGGCCCG 205 0.0 18.242882 10 GATTTCG 400 0.0 18.150023 41 TAGGACC 740 0.0 18.135159 4 GTGTTAA 85 1.4296132E-4 18.118708 1 ACCGTCG 170 1.2732926E-10 18.116632 8 >>END_MODULE