##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063917_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2065399 Sequences flagged as poor quality 0 Sequence length 50 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201630290321628 32.0 32.0 32.0 32.0 32.0 2 31.135802815823965 32.0 32.0 32.0 32.0 32.0 3 31.311594999319745 32.0 32.0 32.0 32.0 32.0 4 31.44240362273827 32.0 32.0 32.0 32.0 32.0 5 31.329246310277092 32.0 32.0 32.0 32.0 32.0 6 34.91235398099835 36.0 36.0 36.0 36.0 36.0 7 34.94116536320585 36.0 36.0 36.0 36.0 36.0 8 34.85996168294843 36.0 36.0 36.0 32.0 36.0 9 35.03082310004024 36.0 36.0 36.0 36.0 36.0 10 34.8201393532194 36.0 36.0 36.0 32.0 36.0 11 35.03341049356565 36.0 36.0 36.0 36.0 36.0 12 34.89159576430511 36.0 36.0 36.0 32.0 36.0 13 34.969534215906954 36.0 36.0 36.0 36.0 36.0 14 34.89475205517191 36.0 36.0 36.0 32.0 36.0 15 34.836614136057975 36.0 36.0 36.0 32.0 36.0 16 34.85468037894857 36.0 36.0 36.0 32.0 36.0 17 34.80757277407416 36.0 36.0 36.0 32.0 36.0 18 34.813173144753144 36.0 36.0 36.0 32.0 36.0 19 34.82104668395792 36.0 36.0 36.0 32.0 36.0 20 34.811647531542334 36.0 36.0 36.0 32.0 36.0 21 34.80593192889122 36.0 36.0 36.0 32.0 36.0 22 34.78772866647074 36.0 36.0 36.0 32.0 36.0 23 34.72823459292853 36.0 36.0 36.0 32.0 36.0 24 34.68486282795721 36.0 36.0 36.0 32.0 36.0 25 34.653057351146195 36.0 36.0 36.0 32.0 36.0 26 34.575276254128134 36.0 36.0 36.0 32.0 36.0 27 34.58769855122424 36.0 36.0 36.0 32.0 36.0 28 34.558503708000245 36.0 36.0 36.0 32.0 36.0 29 34.5205110489547 36.0 36.0 36.0 32.0 36.0 30 34.50460032177802 36.0 36.0 36.0 32.0 36.0 31 34.50758909053408 36.0 36.0 36.0 32.0 36.0 32 34.45041660231268 36.0 36.0 36.0 32.0 36.0 33 34.420864927309445 36.0 36.0 36.0 32.0 36.0 34 34.41290036453005 36.0 36.0 36.0 32.0 36.0 35 34.36741714312828 36.0 36.0 36.0 32.0 36.0 36 34.34037248977074 36.0 36.0 36.0 32.0 36.0 37 34.33515751678005 36.0 36.0 36.0 32.0 36.0 38 34.28669811498892 36.0 36.0 36.0 32.0 36.0 39 34.2989887184026 36.0 36.0 36.0 32.0 36.0 40 34.26039665943481 36.0 36.0 36.0 32.0 36.0 41 34.2469212970472 36.0 36.0 36.0 32.0 36.0 42 34.156183381516115 36.0 36.0 36.0 32.0 36.0 43 34.16149470392888 36.0 36.0 36.0 32.0 36.0 44 34.06882495827683 36.0 36.0 36.0 32.0 36.0 45 34.0417996716373 36.0 36.0 36.0 32.0 36.0 46 34.031659742258036 36.0 36.0 36.0 32.0 36.0 47 34.001361480275726 36.0 36.0 36.0 32.0 36.0 48 33.94937539913595 36.0 36.0 36.0 32.0 36.0 49 33.9271012525909 36.0 36.0 36.0 32.0 36.0 50 33.23093842884595 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 3.0 18 0.0 19 6.0 20 26.0 21 62.0 22 225.0 23 714.0 24 1752.0 25 4005.0 26 8272.0 27 15426.0 28 25949.0 29 41315.0 30 61135.0 31 89790.0 32 133954.0 33 220916.0 34 439215.0 35 1022633.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.043926991712844 17.7523732051161 11.84585848168135 26.3578413214897 2 16.64175610502428 19.814669294743023 35.62476608522656 27.918808515006134 3 18.411547627232384 23.509073813519358 28.084762519887246 29.99461603936101 4 12.564351972669687 14.991050155442121 34.62386686543375 37.820731006454444 5 15.228244034203561 35.89810007654695 31.992075138992515 16.881580750256973 6 36.181065344306525 34.631097735158065 15.528145180735143 13.65969173980027 7 31.66080742752369 29.655286944556476 19.88119486840073 18.802710759519105 8 29.445787472541625 31.67204012396636 18.34851280551603 20.533659597975984 9 27.505074156276265 13.502630039779836 17.776299429447924 41.21599637449597 10 16.388622324823835 25.687017098080833 29.820497749080317 28.103862828015018 11 39.091109800629226 20.36222558557721 21.225739542693468 19.3209250711001 12 25.779983218722595 22.70991969098435 27.316249612060055 24.193847478233 13 29.56058704594576 18.28137225282174 25.197057023557758 26.96098367767475 14 24.478514805129663 18.787749969860545 23.820917895283188 32.91281732972661 15 25.76771210342198 26.573444857346907 21.387287715008537 26.27155532422258 16 27.003646779485074 25.035780271368424 22.45417801241803 25.506394936728473 17 24.864735578936564 25.47178535479101 23.980644902026192 25.68283416424623 18 26.296667313840334 23.742090480688642 25.00824299127865 24.952999214192374 19 26.35988449672605 23.960344650614214 24.496319349897067 25.183451502762665 20 26.885134621520564 22.9270793843079 23.770458070004448 26.41732792416709 21 28.17784844477992 23.02388061580353 23.537195476515677 25.261075462900873 22 26.994277613456397 23.00390675497253 24.271508092633038 25.730307538938035 23 25.0220782616274 22.742594583079143 25.305609621474012 26.929717533819442 24 25.618298168817756 24.046486203312018 24.423316308275396 25.911899319594827 25 25.8426634439777 23.33389497984851 24.490741547704125 26.33270002846967 26 25.58470364992202 24.639745661235757 24.73140406831626 25.044146620525964 27 26.244581172379366 23.536244711906967 24.10615067500205 26.113023440711626 28 25.282595159495713 23.553663787051125 25.16924721665677 25.994493836796394 29 25.168664233498887 23.86907568998124 25.11264456415535 25.849615512364515 30 24.992930891230625 24.20094861629459 25.308861950957816 25.49725854151697 31 26.087103887262515 23.93236099315437 23.770541017151366 26.209994102431754 32 25.846946566918326 23.758419352636455 23.517247356477 26.877386723968215 33 25.04327439622836 23.575164781638 24.629534854106577 26.75202596802706 34 26.314023480925137 23.614220640128288 24.4633802926013 25.60837558634527 35 26.874303081186106 23.30181795645368 24.70526658793875 25.118612374421463 36 25.270307305390844 24.47311259406888 24.02904841175998 26.2275316887803 37 26.575713764175784 24.048015850343628 24.14674156715818 25.22952881832241 38 25.3744843214348 23.57624295481397 24.688317096318105 26.360955627433132 39 26.429439167037476 23.688727513590017 23.763389681804558 26.11844363756795 40 26.399264435667895 24.062133688526853 24.38246633868399 25.156135537121255 41 25.060317033007205 24.68938483162796 24.990788428232293 25.259509707132537 42 27.166886160281983 24.43176976410892 23.93185691598559 24.469487159623505 43 26.117838450253466 23.266969114492802 24.456005461491163 26.159186973762573 44 25.56485009230787 24.265228862030114 23.717482234426647 26.452438811235368 45 25.638286952665183 24.600895141407943 23.878700786105362 25.882117119821512 46 25.418144404769112 24.233081159595717 24.25879077649337 26.0899836591418 47 25.769266524123825 23.762675854482353 24.777954665179262 25.690102956214556 48 27.06520386587668 24.746278239119416 23.22009845290369 24.968419442100213 49 25.653144778327796 24.91420514846576 23.383745071153562 26.04890500205288 50 25.904414221180712 24.852738250289296 23.551276526724024 25.691571001805976 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 17.0 1 23.5 2 30.0 3 95.0 4 160.0 5 197.5 6 235.0 7 245.5 8 256.0 9 339.0 10 422.0 11 682.0 12 942.0 13 1744.5 14 2547.0 15 3481.5 16 4416.0 17 4692.5 18 4969.0 19 5003.5 20 5038.0 21 5406.0 22 5774.0 23 6423.5 24 7073.0 25 7263.0 26 7453.0 27 8211.5 28 8970.0 29 10857.5 30 12745.0 31 15387.5 32 18030.0 33 21553.0 34 25076.0 35 29962.5 36 34849.0 37 44675.5 38 54502.0 39 63284.0 40 72066.0 41 82281.0 42 92496.0 43 98437.0 44 104378.0 45 118990.5 46 133603.0 47 145731.5 48 157860.0 49 166462.0 50 175064.0 51 167836.0 52 160608.0 53 160600.5 54 160593.0 55 164065.5 56 167538.0 57 163734.0 58 159930.0 59 146775.0 60 133620.0 61 117724.0 62 101828.0 63 88304.0 64 74780.0 65 63864.5 66 52949.0 67 46045.5 68 39142.0 69 36295.0 70 33448.0 71 25616.0 72 17784.0 73 15500.5 74 13217.0 75 10209.5 76 7202.0 77 6225.0 78 5248.0 79 4326.5 80 3405.0 81 2798.5 82 2192.0 83 1843.5 84 1495.0 85 1071.0 86 647.0 87 470.5 88 294.0 89 243.5 90 193.0 91 158.0 92 123.0 93 95.5 94 68.0 95 60.5 96 53.0 97 42.5 98 32.0 99 35.5 100 39.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007456186431774199 2 4.841679501152078E-4 3 2.420839750576039E-4 4 0.0 5 0.0 6 4.841679501152077E-5 7 0.0 8 0.0 9 0.001500920645357144 10 0.0010167526952419364 11 4.841679501152077E-5 12 9.683359002304155E-5 13 3.389175650806454E-4 14 0.0 15 0.0035828428308525375 16 7.262519251728116E-4 17 0.0 18 3.873343600921662E-4 19 1.4525038503456235E-4 20 7.746687201843324E-4 21 0.0 22 9.683359002304155E-5 23 9.199191052188947E-4 24 5.810015401382494E-4 25 0.0020819221854953933 26 0.005906848991405534 27 0.007068852071682033 28 0.0037280932158870995 29 0.002566090135610601 30 0.003631259625864058 31 0.006826768096624429 32 0.0032923420607834128 33 0.00435751155103687 34 0.003050258085725809 35 0.0028081741106682047 36 0.007601436816808762 37 0.003921760395933183 38 0.0076982704068318045 39 0.004648012321105995 40 0.0022271725705299557 41 0.003001841290714288 42 0.0018882550054493104 43 0.0014040870553341024 44 0.0013556702603225816 45 0.001307253465311061 46 0.0011620030802764988 47 0.0026629237256336428 48 0.0022271725705299557 49 3.389175650806454E-4 50 0.0014040870553341024 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2065399.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.70868755164379 #Duplication Level Percentage of deduplicated Percentage of total 1 69.06514885085706 27.424864164264534 2 15.148065117531583 12.030195695280318 3 6.105880974941087 7.273695595843856 4 2.9834186081103966 4.73870549380863 5 1.7753086099464854 3.5247587450054025 6 1.0689285601280967 2.546745012549304 7 0.7427670088955728 2.0646012155932323 8 0.5263490117835482 1.6720502761623512 9 0.38837805120082447 1.387978441834487 >10 1.9598729514340347 13.661361536895953 >50 0.11211214416140709 3.0658280887799028 >100 0.09430248878698623 8.167420864421603 >500 0.017926136852341776 4.901147658832379 >1k 0.0115414853706858 7.54064721072808 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3834 0.18562999207417064 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 3548 0.1717827887008757 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 3452 0.16713477637976973 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 3160 0.15299707223640566 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3115 0.15081831646088723 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3025 0.14646080490985036 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2957 0.14316846284906692 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2929 0.14181279258874435 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2917 0.14123179104860611 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2728 0.13208101679142867 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2648 0.12820767319050702 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2621 0.12690041972519595 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 2219 0.1074368681305646 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 2187 0.10588753069019592 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 2176 0.10535494594506921 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 4.841679501152078E-5 5 0.0 0.0 0.0 0.0 4.841679501152078E-5 6 0.0 0.0 0.0 0.0 1.4525038503456232E-4 7 0.0 0.0 0.0 0.0 1.4525038503456232E-4 8 0.0 0.0 0.0 0.0 1.4525038503456232E-4 9 0.0 0.0 0.0 0.0 1.4525038503456232E-4 10 0.0 0.0 0.0 0.0 1.4525038503456232E-4 11 0.0 0.0 0.0 0.0 1.4525038503456232E-4 12 0.0 0.0 0.0 0.0 2.420839750576039E-4 13 0.0 0.0 0.0 0.0 3.8733436009216624E-4 14 0.0 0.0 0.0 0.0 4.841679501152078E-4 15 0.0 0.0 0.0 0.0 4.841679501152078E-4 16 0.0 0.0 0.0 0.0 5.325847451267286E-4 17 0.0 0.0 0.0 0.0 5.325847451267286E-4 18 0.0 0.0 0.0 0.0 5.810015401382493E-4 19 0.0 0.0 0.0 0.0 5.810015401382493E-4 20 0.0 0.0 0.0 0.0 7.262519251728116E-4 21 0.0 0.0 0.0 0.0 7.262519251728116E-4 22 0.0 0.0 0.0 0.0 7.746687201843325E-4 23 0.0 0.0 0.0 0.0 8.71502310207374E-4 24 0.0 0.0 0.0 1.4525038503456232E-4 9.199191052188947E-4 25 0.0 0.0 0.0 1.9366718004608312E-4 9.199191052188947E-4 26 0.0 0.0 0.0 2.420839750576039E-4 9.683359002304156E-4 27 0.0 0.0 0.0 5.325847451267286E-4 0.0011135862852649778 28 0.0 0.0 0.0 0.0014040870553341026 0.0011135862852649778 29 0.0 0.0 0.0 0.0038249268059101413 0.0011135862852649778 30 4.841679501152078E-5 0.0 0.0 0.007068852071682033 0.0011135862852649778 31 4.841679501152078E-5 0.0 0.0 0.016945878254032272 0.0011135862852649778 32 4.841679501152078E-5 0.0 0.0 0.02817857469670509 0.0011620030802764986 33 4.841679501152078E-5 0.0 0.0 0.038491352034159015 0.0011620030802764986 34 4.841679501152078E-5 0.0 0.0 0.05045030040200465 0.0011620030802764986 35 4.841679501152078E-5 0.0 0.0 0.0647816717254148 0.0011620030802764986 36 4.841679501152078E-5 0.0 0.0 0.08555247678535721 0.0011620030802764986 37 4.841679501152078E-5 0.0 0.0 0.11784647905804158 0.0011620030802764986 38 4.841679501152078E-5 0.0 0.0 0.16369718393395175 0.0011620030802764986 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4210 0.0 21.269262 1 ATACCGT 950 0.0 19.452942 6 TACCGTC 860 0.0 19.442171 7 CGCCCCT 590 0.0 19.390139 5 ACCGTCG 875 0.0 18.857443 8 CGCAATA 990 0.0 18.445185 36 ACCGTTA 60 0.0074131545 18.333626 8 TCTAGCG 1035 0.0 18.067923 28 GCGCAAT 1030 0.0 17.942469 35 CGTCGTA 930 0.0 17.742218 10 CGAATGC 1030 0.0 17.72715 43 ATACGAA 1030 0.0 17.72715 40 TACGAAT 1020 0.0 17.685272 41 CTAGCGG 1045 0.0 17.684492 29 CCGTCGT 940 0.0 17.553898 9 ATTAGAC 140 8.3813575E-8 17.285572 3 TAGCGGC 1080 0.0 17.1118 30 AACGCAG 5215 0.0 16.959044 6 GCAATAC 1090 0.0 16.550722 37 CCTAATA 80 0.001990068 16.498667 2 >>END_MODULE