SRR4063916_2.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR4063916_2.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1569200
Sequences flagged as poor quality	0
Sequence length	25
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTT	3971	0.25305888350751976	No Hit
GTCCTAAAGTGTGTATTTCTCATTT	3839	0.24464695386184043	No Hit
GTCCTACAGTGGACATTTCTAAATT	3491	0.2224700484323222	No Hit
CTGTAGGACGTGGAATATGGCAAGA	3380	0.21539638032118277	No Hit
CTTTAGGACGTGAAATATGGCGAGG	3209	0.20449910782564365	No Hit
TATCAACGCAGAGTACTTTTTTTTT	2802	0.17856232475146572	No Hit
GTCCTACAGTGTGCATTTCTCATTT	2370	0.15103237318378793	No Hit
GTACTTTTTTTTTTTTTTTTTTTTT	1898	0.12095335202651032	No Hit
CTGTAGGACCTGGAATATGGCGAGA	1747	0.1113306143257711	No Hit
ATTTAGAAATGTCCACTGTAGGACG	1741	0.11094825388733112	No Hit
GATATACACTGTTCTACAAATCCCG	1589	0.1012617894468519	No Hit
CTGAAGGACCTGGAATATGGCGAGA	1582	0.10081570226867194	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGAATA	25	0.006030346	19.000957	11
ACAGTCG	50	0.0014979079	13.301943	8
ACCGAGC	50	0.0014979079	13.301943	8
CCGTCGT	210	0.0	12.6689205	9
ACTATTC	60	4.087023E-4	12.668517	8
TAGAAAT	510	0.0	12.664477	4
GTCTAGT	60	4.0991357E-4	12.664074	1
GCGTTAT	60	4.0991357E-4	12.664074	1
CGCATCG	175	0.0	12.486342	13
ATTTAGA	505	0.0	12.413299	1
CACCTTT	500	0.0	12.161	14
TTTGCGC	150	1.4551915E-11	12.034323	17
CGTCGTA	215	0.0	11.932356	10
GTATCAA	2615	0.0	11.91343	1
AAATGTC	495	0.0	11.900349	7
GTGACTA	80	2.8649216E-5	11.875598	12
ATTTGCG	160	3.6379788E-12	11.875598	16
TAGGACC	915	0.0	11.834021	4
GTCCTAA	1105	0.0	11.775869	1
TTTAGAA	575	0.0	11.72579	2