##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063916_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1569200 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.337913586540914 32.0 32.0 32.0 32.0 32.0 2 31.415660846291104 32.0 32.0 32.0 32.0 32.0 3 31.479645042059648 32.0 32.0 32.0 32.0 32.0 4 31.559267779760386 32.0 32.0 32.0 32.0 32.0 5 31.50760068824879 32.0 32.0 32.0 32.0 32.0 6 35.10331442773388 36.0 36.0 36.0 36.0 36.0 7 35.12228332908489 36.0 36.0 36.0 36.0 36.0 8 35.066579785878154 36.0 36.0 36.0 36.0 36.0 9 35.18393257710935 36.0 36.0 36.0 36.0 36.0 10 35.03528039765486 36.0 36.0 36.0 36.0 36.0 11 35.178525363242414 36.0 36.0 36.0 36.0 36.0 12 35.0845341575325 36.0 36.0 36.0 36.0 36.0 13 35.12259622737701 36.0 36.0 36.0 36.0 36.0 14 35.0719844506755 36.0 36.0 36.0 36.0 36.0 15 35.03947552893194 36.0 36.0 36.0 36.0 36.0 16 35.06043525363243 36.0 36.0 36.0 36.0 36.0 17 35.03319844506755 36.0 36.0 36.0 36.0 36.0 18 35.0305149120571 36.0 36.0 36.0 36.0 36.0 19 35.00945832271221 36.0 36.0 36.0 36.0 36.0 20 35.01023515166964 36.0 36.0 36.0 36.0 36.0 21 34.999314300280396 36.0 36.0 36.0 36.0 36.0 22 34.98212974764211 36.0 36.0 36.0 36.0 36.0 23 34.94329339790976 36.0 36.0 36.0 36.0 36.0 24 34.91001529441754 36.0 36.0 36.0 32.0 36.0 25 34.8853428498598 36.0 36.0 36.0 32.0 36.0 26 34.82969156257966 36.0 36.0 36.0 32.0 36.0 27 34.81442645934234 36.0 36.0 36.0 32.0 36.0 28 34.78035049706857 36.0 36.0 36.0 32.0 36.0 29 34.755764083609485 36.0 36.0 36.0 32.0 36.0 30 34.7286024725975 36.0 36.0 36.0 32.0 36.0 31 34.71802956920724 36.0 36.0 36.0 32.0 36.0 32 34.68013000254907 36.0 36.0 36.0 32.0 36.0 33 34.6700503441244 36.0 36.0 36.0 32.0 36.0 34 34.66493244965588 36.0 36.0 36.0 32.0 36.0 35 34.6239943920469 36.0 36.0 36.0 32.0 36.0 36 34.592629365281674 36.0 36.0 36.0 32.0 36.0 37 34.55903900076472 36.0 36.0 36.0 32.0 36.0 38 34.51820481774153 36.0 36.0 36.0 32.0 36.0 39 34.468566785623246 36.0 36.0 36.0 32.0 36.0 40 34.47416263063982 36.0 36.0 36.0 32.0 36.0 41 34.45901096099924 36.0 36.0 36.0 32.0 36.0 42 34.41555187356615 36.0 36.0 36.0 32.0 36.0 43 34.40580295692072 36.0 36.0 36.0 32.0 36.0 44 34.324974509304106 36.0 36.0 36.0 32.0 36.0 45 34.29552319653327 36.0 36.0 36.0 32.0 36.0 46 34.233644532245734 36.0 36.0 36.0 32.0 36.0 47 34.21331697680347 36.0 36.0 36.0 32.0 36.0 48 34.16221514147336 36.0 36.0 36.0 32.0 36.0 49 34.134277976038746 36.0 36.0 36.0 32.0 36.0 50 33.556154091256694 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 5.0 20 16.0 21 34.0 22 140.0 23 419.0 24 1080.0 25 2533.0 26 5462.0 27 10101.0 28 17024.0 29 27215.0 30 39905.0 31 57534.0 32 84291.0 33 135605.0 34 277997.0 35 909838.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.762309249335914 18.52040452142169 12.267695900230965 26.449590329011436 2 14.704956436178621 20.631700900845786 39.79525768675853 24.86808497621706 3 18.31758536372425 24.866986108181447 29.29562062634583 27.51980790174847 4 11.969219984705584 16.651351006882486 36.821246495029314 34.55818251338261 5 13.379492735151668 37.83106041294928 34.07953097119552 14.709915880703543 6 33.0655527197066 36.609854097164465 17.267324965985743 13.057268217143184 7 29.251776545583507 30.797853934209662 21.271771485670694 18.678598034536133 8 26.568824878919195 35.866619933724195 19.48030843742034 18.084246749936273 9 27.50036802684716 14.037404273189994 18.79912999090607 39.66309770905677 10 15.776822152603767 27.426796534258486 32.44276657736358 24.35361473577417 11 36.58736936018353 20.50108335457558 24.341256691307674 18.570290593933215 12 25.387108573933947 23.19127350404474 30.40419373463387 21.017424187387444 13 30.169373576498508 20.285828265976036 25.50130831496934 24.043489842556117 14 22.53163088821395 21.168064624259333 25.611492269279644 30.688812218247076 15 23.867651332459815 30.34793847283332 22.18748247434244 23.596927720364434 16 23.782221262065946 26.064100627776515 26.65306728507528 23.500610825082255 17 22.633443793015548 27.218773897527406 26.61311496303849 23.53466734641856 18 23.28767297882035 25.435016043257846 29.133791530052033 22.143519447869767 19 25.633507519755288 24.599286260514912 25.835202651032375 23.932003568697425 20 25.739632715201655 25.47503777424163 26.030037133784223 22.75529237677249 21 25.64618914096355 24.50274024980882 24.967626816212082 24.88344379301555 22 25.445721033469944 26.213373829578018 25.45706440037242 22.883840736579618 23 23.45435589452862 25.95202347207211 26.501799661480106 24.091820971919162 24 24.938169012558653 25.29421098816783 26.577096438496888 23.190523560776626 25 24.301940323903512 25.684708677384428 26.72500320232785 23.28834779638421 26 22.729882768312073 26.931614317624902 27.374539151050115 22.96396376301291 27 23.63057000101968 26.359997960640356 26.4062659324972 23.603166105842767 28 22.9261490733105 26.620224913869688 26.136391155885985 24.317234856933826 29 23.810209646798963 25.36677196696583 25.675152931849652 25.147865454385553 30 22.8650834720498 26.13195186177467 26.691236263246044 24.31172840292949 31 24.77112573951958 25.071235420717574 25.852578527850167 24.30506031191268 32 23.672834962556234 26.49015105601557 25.74401603922626 24.09299794220194 33 22.95894046150238 26.30033343190138 27.089047730725696 23.651678375870546 34 23.9535722570465 26.136157965978988 26.914669616887636 22.995600160086877 35 23.93655224275331 26.455662725079897 26.708918437512946 22.898866594653843 36 22.873046555098604 26.484063662499274 26.864922085263597 23.77796769713853 37 23.763323338506 26.2816374522431 25.542317631576434 24.412721577674464 38 23.86691275629734 27.016664584761983 25.506795081946315 23.609627576994356 39 24.9445238225731 25.31428003329208 25.716346895309666 24.024849248825152 40 25.63511687781998 25.556348619643632 26.211667388921462 22.596867113614927 41 24.435873643853494 25.199215882208993 27.23898003507627 23.125930438861246 42 24.543549663708422 27.033713278450954 26.220801517231358 22.201935540609263 43 23.223770871556564 26.47075130274965 26.867646243486256 23.437831582207533 44 22.917805792302506 26.844809984284844 25.886861085938822 24.35052313747382 45 23.12201755817036 27.085160185166302 25.974646695352487 23.81817556131085 46 23.55038175771051 25.498394393537044 26.022869138134414 24.928354710618034 47 24.78918764593721 25.56246367501759 26.0278695461544 23.620479132890807 48 23.903850051045964 26.294662032381368 25.286870672086074 24.51461724448659 49 24.26801547037235 26.08863281954482 25.559124976978616 24.084226733104213 50 23.610997817974184 27.530104818810287 24.888604523115198 23.97029284010033 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 28.0 1 32.0 2 36.0 3 81.5 4 127.0 5 161.5 6 196.0 7 216.0 8 236.0 9 300.0 10 364.0 11 593.5 12 823.0 13 1496.0 14 2169.0 15 2907.5 16 3646.0 17 3973.5 18 4301.0 19 4332.0 20 4363.0 21 4752.5 22 5142.0 23 6155.0 24 7168.0 25 8817.5 26 10467.0 27 14928.5 28 19390.0 29 24655.5 30 29921.0 31 35797.0 32 41673.0 33 51598.0 34 61523.0 35 73045.0 36 84567.0 37 87426.5 38 90286.0 39 88093.5 40 85901.0 41 84883.0 42 83865.0 43 82662.0 44 81459.0 45 87049.5 46 92640.0 47 97800.5 48 102961.0 49 105746.0 50 108531.0 51 105284.0 52 102037.0 53 100592.5 54 99148.0 55 98380.5 56 97613.0 57 94432.0 58 91251.0 59 82533.0 60 73815.0 61 64712.0 62 55609.0 63 48022.5 64 40436.0 65 34353.0 66 28270.0 67 23965.0 68 19660.0 69 17581.0 70 15502.0 71 11921.0 72 8340.0 73 7227.5 74 6115.0 75 4683.0 76 3251.0 77 2884.5 78 2518.0 79 2085.5 80 1653.0 81 1300.0 82 947.0 83 801.0 84 655.0 85 476.0 86 297.0 87 197.0 88 97.0 89 78.5 90 60.0 91 56.5 92 53.0 93 35.5 94 18.0 95 28.5 96 39.0 97 26.0 98 13.0 99 16.5 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008666836604639306 2 5.098139179199591E-4 3 1.9118021921998472E-4 4 0.0 5 0.0 6 3.186336986999745E-4 7 1.9118021921998472E-4 8 0.0 9 0.001338261534539893 10 7.647208768799389E-4 11 0.0 12 1.2745347947998978E-4 13 3.8236043843996943E-4 14 3.8236043843996943E-4 15 0.004588325261279633 16 7.00994137139944E-4 17 0.0 18 3.186336986999745E-4 19 0.0 20 5.735406576599542E-4 21 0.0 22 6.372673973999489E-5 23 0.0010196278358399183 24 1.9118021921998472E-4 25 0.0018480754524598522 26 0.005416772877899567 27 0.005098139179199592 28 0.004205964822839664 29 0.002357889370379811 30 0.003313790466479735 31 0.006818761152179455 32 0.0029951567677797605 33 0.004078511343359673 34 0.003313790466479735 35 0.0022304358908998216 36 0.007201121590619424 37 0.0035049706856997193 38 0.007902115727759368 39 0.0036961509049197043 40 0.002549069589599796 41 0.0030588835075197555 42 0.0016568952332398675 43 0.001210808055059903 44 8.921743563599286E-4 45 0.0010196278358399183 46 7.00994137139944E-4 47 0.0020392556716798366 48 0.0016568952332398675 49 4.460871781799643E-4 50 0.0010196278358399183 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1569200.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.28176413517767 #Duplication Level Percentage of deduplicated Percentage of total 1 76.59262492915055 42.3417542582743 2 13.621980849026544 15.060942646995851 3 4.354431409625 7.2216195038909525 4 1.8422590730093589 4.073733261999777 5 0.9948634700299317 2.749890384844954 6 0.584573416074682 1.938974982428139 7 0.3869240996850018 1.497289277190157 8 0.27882633009083835 1.2331209131807135 9 0.2063523600951816 1.026677024956717 >10 0.9940541910721403 9.701365840266956 >50 0.07190641972172042 2.7619633262868546 >100 0.06285403934482438 6.896081355654688 >500 0.0068418801580199225 2.4811967056974704 >1k 0.0015075329161738811 1.0153905183325298 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1801 0.11477185827173082 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 1.274534794799898E-4 19 0.0 0.0 0.0 0.0 1.274534794799898E-4 20 0.0 0.0 0.0 0.0 1.274534794799898E-4 21 0.0 0.0 0.0 6.37267397399949E-5 1.274534794799898E-4 22 0.0 0.0 0.0 6.37267397399949E-5 1.274534794799898E-4 23 0.0 0.0 0.0 1.274534794799898E-4 1.274534794799898E-4 24 0.0 0.0 0.0 1.9118021921998472E-4 1.274534794799898E-4 25 0.0 0.0 0.0 3.1863369869997453E-4 1.274534794799898E-4 26 0.0 0.0 0.0 3.1863369869997453E-4 1.274534794799898E-4 27 0.0 0.0 0.0 4.460871781799643E-4 1.9118021921998472E-4 28 0.0 0.0 0.0 6.372673973999491E-4 1.9118021921998472E-4 29 0.0 0.0 0.0 0.001975528931939842 1.9118021921998472E-4 30 0.0 0.0 0.0 0.004205964822839663 1.9118021921998472E-4 31 0.0 0.0 0.0 0.010897272495539128 1.9118021921998472E-4 32 0.0 0.0 0.0 0.020073923018098395 1.9118021921998472E-4 33 0.0 0.0 0.0 0.028485852663777723 1.9118021921998472E-4 34 0.0 0.0 0.0 0.03785368340555697 3.1863369869997453E-4 35 0.0 0.0 0.0 0.05136375223043589 3.1863369869997453E-4 36 0.0 0.0 0.0 0.06939841957685444 3.1863369869997453E-4 37 0.0 0.0 0.0 0.1025363242416518 3.1863369869997453E-4 38 0.0 0.0 0.0 0.14918429773132807 3.1863369869997453E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 70 3.594323E-8 28.284035 5 TTAATAC 195 0.0 21.434626 3 GTCCTAC 1955 0.0 20.707952 1 TTAGGAC 1505 0.0 20.31773 3 TGTAGGA 2495 0.0 20.104296 2 TAGGACC 1255 0.0 19.807589 4 GTAGGAC 2455 0.0 19.713697 3 TAGGACG 2635 0.0 19.702816 4 TAATACT 190 0.0 19.683043 4 GTATCAA 3125 0.0 19.643562 1 GACGTGA 1505 0.0 19.148365 7 AGGACGT 2685 0.0 18.92625 5 CTGTAGG 2515 0.0 18.89652 1 TCCTACA 2120 0.0 18.7831 2 GGACGTG 2645 0.0 18.713444 6 GTCCTAA 1280 0.0 18.564356 1 TTTAGGA 1760 0.0 18.375078 2 TAGGACA 720 0.0 18.332243 4 AGGACCT 1855 0.0 18.144474 5 GTATAGG 195 1.8189894E-12 18.053085 1 >>END_MODULE