##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063915_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2328876 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.365371535453153 32.0 32.0 32.0 32.0 32.0 2 31.462946502948203 32.0 32.0 32.0 32.0 32.0 3 31.51629326765358 32.0 32.0 32.0 32.0 32.0 4 31.590369774947227 32.0 32.0 32.0 32.0 32.0 5 31.558408004548117 32.0 32.0 32.0 32.0 32.0 6 35.154792698280204 36.0 36.0 36.0 36.0 36.0 7 35.16968829598484 36.0 36.0 36.0 36.0 36.0 8 35.119444315626936 36.0 36.0 36.0 36.0 36.0 9 35.208814037329596 36.0 36.0 36.0 36.0 36.0 10 35.0854291941692 36.0 36.0 36.0 36.0 36.0 11 35.207612599382706 36.0 36.0 36.0 36.0 36.0 12 35.126751703396835 36.0 36.0 36.0 36.0 36.0 13 35.16313191427968 36.0 36.0 36.0 36.0 36.0 14 35.111899044861126 36.0 36.0 36.0 36.0 36.0 15 35.090009944711525 36.0 36.0 36.0 36.0 36.0 16 35.099475025720565 36.0 36.0 36.0 36.0 36.0 17 35.07265693836855 36.0 36.0 36.0 36.0 36.0 18 35.063498013634046 36.0 36.0 36.0 36.0 36.0 19 35.066832669493785 36.0 36.0 36.0 36.0 36.0 20 35.057129705488826 36.0 36.0 36.0 36.0 36.0 21 35.05293927199215 36.0 36.0 36.0 36.0 36.0 22 35.03811795904977 36.0 36.0 36.0 36.0 36.0 23 34.98999388546234 36.0 36.0 36.0 36.0 36.0 24 34.96838474869422 36.0 36.0 36.0 36.0 36.0 25 34.94340746351459 36.0 36.0 36.0 36.0 36.0 26 34.883961619253235 36.0 36.0 36.0 32.0 36.0 27 34.88149819913126 36.0 36.0 36.0 32.0 36.0 28 34.86079851396124 36.0 36.0 36.0 32.0 36.0 29 34.84444083755425 36.0 36.0 36.0 32.0 36.0 30 34.831000877676615 36.0 36.0 36.0 32.0 36.0 31 34.81913893225745 36.0 36.0 36.0 32.0 36.0 32 34.788400498781385 36.0 36.0 36.0 32.0 36.0 33 34.76695453085523 36.0 36.0 36.0 32.0 36.0 34 34.76338456834971 36.0 36.0 36.0 32.0 36.0 35 34.7342129851482 36.0 36.0 36.0 32.0 36.0 36 34.71319426195298 36.0 36.0 36.0 32.0 36.0 37 34.704180901001166 36.0 36.0 36.0 32.0 36.0 38 34.680724950577016 36.0 36.0 36.0 32.0 36.0 39 34.67453827511641 36.0 36.0 36.0 32.0 36.0 40 34.65985050298943 36.0 36.0 36.0 32.0 36.0 41 34.65226701636326 36.0 36.0 36.0 32.0 36.0 42 34.60296254502172 36.0 36.0 36.0 32.0 36.0 43 34.58666970675983 36.0 36.0 36.0 32.0 36.0 44 34.54721762773114 36.0 36.0 36.0 32.0 36.0 45 34.5187592641257 36.0 36.0 36.0 32.0 36.0 46 34.50696258624332 36.0 36.0 36.0 32.0 36.0 47 34.48944469349163 36.0 36.0 36.0 32.0 36.0 48 34.44531224504868 36.0 36.0 36.0 32.0 36.0 49 34.43048234427252 36.0 36.0 36.0 32.0 36.0 50 33.8575570360981 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 6.0 20 24.0 21 59.0 22 198.0 23 616.0 24 1663.0 25 3795.0 26 7580.0 27 14337.0 28 23941.0 29 37597.0 30 53835.0 31 76564.0 32 110428.0 33 175851.0 34 371211.0 35 1451169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.483350553492855 17.58796667276458 11.809722819846211 27.11895995389635 2 15.959312386371735 19.93940398460023 37.050693341738 27.05059028729004 3 18.336719814089935 23.260614169630912 28.804938708419712 29.59772730785944 4 12.69273245977888 15.96426774117643 35.30458470094586 36.038415098098824 5 14.444006464921275 36.42886096125341 33.725840276596955 15.401292297228364 6 34.982216689732226 35.18690832331058 16.42398091090568 13.40689407605151 7 30.61495357200365 30.37320594707745 20.381729375771563 18.630111105147336 8 28.08367641729315 33.6635355424677 18.90134983571474 19.351438204524417 9 27.41265209236498 14.223556024266074 18.05751169677025 40.3062801865987 10 15.650846895774666 27.206295961368188 32.1118333535149 25.031023789342242 11 37.20721927659523 21.106104404012925 22.260266325901423 19.426409993490424 12 24.53679331728552 23.463484928768153 28.984779769107305 23.014941984839023 13 29.890710664083432 19.688998584717698 24.762416354067906 25.657874397130964 14 23.60864985651846 19.11144928164763 25.20199701915649 32.07790384267742 15 25.21841852364279 27.190089600332534 21.963117263673006 25.628374612351674 16 25.64238428795511 25.852357996155206 23.56351575854827 24.941741957341414 17 24.34037893832859 25.849047286780095 25.075154312704633 24.735419462186677 18 24.807900150588246 25.453535989818228 25.64581833140321 24.092745528190317 19 25.577360065542347 24.984799534195894 25.251709408315428 24.18613099194633 20 25.91941822279017 24.698221965730934 24.84065192299765 24.541707888481252 21 26.257130049002182 24.54570359263439 24.607922448425764 24.589243909937668 22 25.89726799420321 24.587794535988404 24.762857602919865 24.75207986688852 23 25.125190759715327 24.446829030343782 25.03776548556667 25.390214724374218 24 25.01433103993755 24.85515451544768 25.076893812039447 25.053620632575324 25 25.281084627685246 24.41687607027717 25.110613199040206 25.191426102997376 26 24.899935201037813 25.111165217600412 25.165572298508078 24.823327282853697 27 25.28859226406976 24.921952765427157 24.800856093352653 24.98859887715043 28 25.14004240026555 24.76950169596768 25.07004803846169 25.02040786530508 29 24.975030165621067 24.967429717323437 25.075467728153004 24.982072388902488 30 25.03064918736176 25.01557687245601 25.04731032178748 24.90646361839475 31 25.102525102009793 24.837312523994097 24.797805468978805 25.26235690501731 32 25.16861825993943 24.878380577649853 24.76621889306036 25.18678226935036 33 24.905775752087063 24.69755272456976 24.97216321353102 25.42450830981216 34 25.324932411310243 24.699586738532254 25.18163923613616 24.793841614021346 35 25.25459464101683 24.690870834764684 25.24781003091721 24.80672449330127 36 24.99478251011506 25.01573835426198 24.98786879923872 25.00161033638424 37 25.418866310601317 24.66246361838314 24.801935429017522 25.11673464199802 38 24.939461593593297 24.716245678358664 24.978882949919846 25.36540977812819 39 25.275124486637544 24.690479584878503 24.908449288979046 25.125946639504903 40 25.478140785945797 24.50468307446028 25.095241694048298 24.921934445545627 41 24.838210874857168 24.75902856531875 25.340872542675356 25.061888017148725 42 25.36442009466528 24.815004227431974 25.094800537779154 24.72577514012359 43 25.01720816012456 24.35447392840289 25.29408455808629 25.33423335338626 44 24.674053765079965 24.5663604334356 25.316263281855523 25.443322519628914 45 24.785751520715483 24.716317751599725 25.29252786153438 25.20540286615042 46 24.721836719270645 24.524228287977575 25.339008814658577 25.414926178093207 47 24.887829699526584 24.423732998400478 25.605230105310618 25.083207196762313 48 24.89343329226824 24.871190296557533 25.11281449899799 25.122561912176238 49 24.66258285141107 24.866630483136014 25.222168023262803 25.248618642190113 50 24.665628671343086 24.961869559541885 25.192455669069 25.180046100046034 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 26.0 2 44.0 3 106.5 4 169.0 5 223.0 6 277.0 7 266.5 8 256.0 9 356.5 10 457.0 11 629.0 12 801.0 13 1497.0 14 2193.0 15 2934.5 16 3676.0 17 3728.0 18 3780.0 19 3735.5 20 3691.0 21 4373.0 22 5055.0 23 6212.0 24 7369.0 25 9570.5 26 11772.0 27 15240.5 28 18709.0 29 22312.0 30 25915.0 31 30614.0 32 35313.0 33 41195.5 34 47078.0 35 55123.5 36 63169.0 37 71820.5 38 80472.0 39 90157.5 40 99843.0 41 109646.0 42 119449.0 43 128007.0 44 136565.0 45 147685.0 46 158805.0 47 166634.5 48 174464.0 49 180375.0 50 186286.0 51 185771.0 52 185256.0 53 183989.0 54 182722.0 55 177741.5 56 172761.0 57 165353.5 58 157946.0 59 143364.0 60 128782.0 61 113121.0 62 97460.0 63 84598.5 64 71737.0 65 60810.5 66 49884.0 67 42084.5 68 34285.0 69 29194.0 70 24103.0 71 18565.0 72 13027.0 73 11139.5 74 9252.0 75 7674.0 76 6096.0 77 5165.0 78 4234.0 79 3433.5 80 2633.0 81 2085.0 82 1537.0 83 1176.5 84 816.0 85 587.5 86 359.0 87 265.5 88 172.0 89 132.0 90 92.0 91 67.5 92 43.0 93 37.5 94 32.0 95 22.0 96 12.0 97 12.5 98 13.0 99 9.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009017225477011228 2 4.29391689381487E-4 3 3.435133515051896E-4 4 0.0 5 0.0 6 3.005741825670409E-4 7 4.29391689381487E-5 8 0.0 9 0.0012022967302681637 10 7.729050408866766E-4 11 0.0 12 8.58783378762974E-5 13 5.152700272577844E-4 14 2.146958446907435E-4 15 0.0038645252044333836 16 5.582091961959331E-4 17 4.29391689381487E-5 18 3.864525204433383E-4 19 0.0 20 5.152700272577844E-4 21 0.0 22 4.29391689381487E-5 23 0.0012881750681444611 24 6.440875340722306E-4 25 0.001717566757525948 26 0.005796787806650075 27 0.0067843886922274955 28 0.005023882765763398 29 0.0028339851499178145 30 0.004422734400629316 31 0.007643172070990469 32 0.004079221049124127 33 0.005281517779392291 34 0.0036068901908044913 35 0.0032633768392993016 36 0.007299658719485279 37 0.0038645252044333836 38 0.008115502929310105 39 0.004809186921072655 40 0.0027481068120415167 41 0.0031345593324848555 42 0.0016746275885877995 43 0.0016746275885877995 44 0.001760505926464097 45 0.0016316884196496508 46 0.0012022967302681637 47 0.002189897615845584 48 0.0022757759537218813 49 3.435133515051896E-4 50 0.0012022967302681637 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2328876.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.40657609193811 #Duplication Level Percentage of deduplicated Percentage of total 1 63.94355690340251 28.39514425220118 2 15.919183379340792 14.138328561124268 3 7.416060280188172 9.87965535403728 4 4.00475925811183 7.113505869009465 5 2.456180388756585 5.453528066442271 6 1.5598369125026181 4.156020992763679 7 1.0852241589871223 3.3733762435009833 8 0.7416771213202666 2.634827321884643 9 0.5450943553777788 2.1785196572432364 >10 2.210464850632375 15.95152352455511 >50 0.07583657107203698 2.2918429754868885 >100 0.03803436296873288 3.1793905179642987 >500 0.0037992103865505406 1.1155619356370874 >1k 2.922469528113993E-4 0.1387747281496063 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.2939168938148704E-5 2 0.0 0.0 0.0 0.0 4.2939168938148704E-5 3 0.0 0.0 0.0 0.0 4.2939168938148704E-5 4 0.0 0.0 0.0 0.0 4.2939168938148704E-5 5 0.0 0.0 0.0 0.0 8.587833787629741E-5 6 0.0 0.0 0.0 0.0 8.587833787629741E-5 7 0.0 0.0 0.0 0.0 8.587833787629741E-5 8 0.0 0.0 0.0 0.0 8.587833787629741E-5 9 0.0 0.0 0.0 0.0 8.587833787629741E-5 10 0.0 0.0 0.0 0.0 8.587833787629741E-5 11 0.0 0.0 0.0 0.0 8.587833787629741E-5 12 0.0 0.0 0.0 0.0 3.8645252044333835E-4 13 0.0 0.0 0.0 4.2939168938148704E-5 4.2939168938148706E-4 14 0.0 0.0 0.0 4.2939168938148704E-5 4.2939168938148706E-4 15 0.0 0.0 0.0 8.587833787629741E-5 5.152700272577844E-4 16 0.0 0.0 0.0 8.587833787629741E-5 5.152700272577844E-4 17 0.0 0.0 0.0 8.587833787629741E-5 5.152700272577844E-4 18 0.0 0.0 0.0 8.587833787629741E-5 5.582091961959331E-4 19 0.0 0.0 0.0 8.587833787629741E-5 6.011483651340818E-4 20 0.0 0.0 0.0 1.288175068144461E-4 7.29965871948528E-4 21 0.0 0.0 0.0 1.7175667575259482E-4 8.158442098248254E-4 22 0.0 0.0 0.0 2.1469584469074353E-4 8.587833787629741E-4 23 0.0 0.0 0.0 3.005741825670409E-4 8.587833787629741E-4 24 0.0 0.0 0.0 3.8645252044333835E-4 8.587833787629741E-4 25 0.0 0.0 0.0 4.2939168938148706E-4 8.587833787629741E-4 26 0.0 0.0 0.0 6.440875340722306E-4 9.876008855774201E-4 27 0.0 0.0 0.0 0.0012881750681444611 0.0011164183923918663 28 0.0 0.0 0.0 0.00429391689381487 0.0011164183923918663 29 0.0 0.0 0.0 0.011464758106485704 0.0011164183923918663 30 0.0 0.0 0.0 0.024389447956868465 0.0011164183923918663 31 0.0 0.0 0.0 0.06002895817553189 0.001159357561330015 32 0.0 0.0 0.0 0.0979442443479172 0.001159357561330015 33 0.0 0.0 0.0 0.13676125306800363 0.001159357561330015 34 0.0 0.0 0.0 0.1766088018426056 0.0012881750681444611 35 0.0 0.0 0.0 0.22336955681624956 0.0012881750681444611 36 0.0 0.0 0.0 0.297139049051989 0.0012881750681444611 37 0.0 0.0 0.0 0.4150929461250835 0.0012881750681444611 38 0.0 0.0 0.0 0.5763724646567701 0.0012881750681444611 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2655 0.0 28.089106 1 GGTATCA 1080 0.0 24.647018 1 TCAACGC 3760 0.0 19.482313 4 ATCAACG 3775 0.0 19.346626 3 CAACGCA 3850 0.0 19.026882 5 TATCAAC 3935 0.0 18.95171 2 AACGCAG 3990 0.0 18.414406 6 TACCGTC 260 0.0 17.767653 7 CGTTAAG 75 0.0012919409 17.598814 2 ATCGATT 130 7.320905E-7 16.923754 29 GTATAGG 280 0.0 16.499243 1 ACGCAGA 4595 0.0 16.037748 7 AGAGTAC 4700 0.0 15.727613 11 CCTATAC 225 2.5465852E-11 15.643055 3 CGCAGAG 4705 0.0 15.5225315 8 CAGAGTA 4855 0.0 15.27081 10 CGTCGTA 260 1.8189894E-12 15.230723 10 TAAGACT 430 0.0 14.835893 4 CGGATCG 135 1.956377E-5 14.667568 26 ATACCGT 285 0.0 14.665365 6 >>END_MODULE