##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063914_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1050358 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.245897113174745 32.0 32.0 32.0 32.0 32.0 2 31.387687816915758 32.0 32.0 32.0 32.0 32.0 3 31.473631847427257 32.0 32.0 32.0 32.0 32.0 4 31.566577300310943 32.0 32.0 32.0 32.0 32.0 5 31.50300564188591 32.0 32.0 32.0 32.0 32.0 6 35.087011285675935 36.0 36.0 36.0 36.0 36.0 7 35.11255019717087 36.0 36.0 36.0 36.0 36.0 8 35.05825918401155 36.0 36.0 36.0 36.0 36.0 9 35.17289628869395 36.0 36.0 36.0 36.0 36.0 10 35.025188554759424 36.0 36.0 36.0 36.0 36.0 11 35.17245548660552 36.0 36.0 36.0 36.0 36.0 12 35.07078919758787 36.0 36.0 36.0 36.0 36.0 13 35.119229824497936 36.0 36.0 36.0 36.0 36.0 14 35.054845109952986 36.0 36.0 36.0 36.0 36.0 15 35.03421595303696 36.0 36.0 36.0 36.0 36.0 16 35.04043192892328 36.0 36.0 36.0 36.0 36.0 17 35.004237602798284 36.0 36.0 36.0 36.0 36.0 18 35.001921249707244 36.0 36.0 36.0 36.0 36.0 19 34.99585855489271 36.0 36.0 36.0 36.0 36.0 20 34.98583720978942 36.0 36.0 36.0 36.0 36.0 21 34.97972024776314 36.0 36.0 36.0 36.0 36.0 22 34.96459207241721 36.0 36.0 36.0 36.0 36.0 23 34.90839218628315 36.0 36.0 36.0 32.0 36.0 24 34.87400771927286 36.0 36.0 36.0 32.0 36.0 25 34.85329478139834 36.0 36.0 36.0 32.0 36.0 26 34.79916752193062 36.0 36.0 36.0 32.0 36.0 27 34.78962220500058 36.0 36.0 36.0 32.0 36.0 28 34.77048492037953 36.0 36.0 36.0 32.0 36.0 29 34.73666787895175 36.0 36.0 36.0 32.0 36.0 30 34.70089816995729 36.0 36.0 36.0 32.0 36.0 31 34.70051639536234 36.0 36.0 36.0 32.0 36.0 32 34.643830008435216 36.0 36.0 36.0 32.0 36.0 33 34.6180806924877 36.0 36.0 36.0 32.0 36.0 34 34.6019519059216 36.0 36.0 36.0 32.0 36.0 35 34.550514205632744 36.0 36.0 36.0 32.0 36.0 36 34.52402799807304 36.0 36.0 36.0 32.0 36.0 37 34.5207986229457 36.0 36.0 36.0 32.0 36.0 38 34.45327593068268 36.0 36.0 36.0 32.0 36.0 39 34.443171756677245 36.0 36.0 36.0 32.0 36.0 40 34.43082739408849 36.0 36.0 36.0 32.0 36.0 41 34.40130031855805 36.0 36.0 36.0 32.0 36.0 42 34.316188385293394 36.0 36.0 36.0 32.0 36.0 43 34.31630167999863 36.0 36.0 36.0 32.0 36.0 44 34.225564045782484 36.0 36.0 36.0 32.0 36.0 45 34.180186184139124 36.0 36.0 36.0 32.0 36.0 46 34.13627353721303 36.0 36.0 36.0 32.0 36.0 47 34.102995359677365 36.0 36.0 36.0 32.0 36.0 48 34.022733201441795 36.0 36.0 36.0 32.0 36.0 49 34.003942465330866 36.0 36.0 36.0 32.0 36.0 50 33.40252371096331 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 3.0 19 1.0 20 16.0 21 28.0 22 121.0 23 371.0 24 928.0 25 2113.0 26 4332.0 27 7835.0 28 13018.0 29 19493.0 30 27669.0 31 38982.0 32 56411.0 33 90251.0 34 184385.0 35 604398.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.36699309221958 17.89062760350959 11.912041246732967 25.830338057537862 2 15.610451333550404 20.7172058182289 37.663682910713916 26.008659937506785 3 18.360822425920354 25.054648138345474 28.99388397838447 27.590645457349698 4 11.95087770074584 16.212281907692425 36.2515447114222 35.58529568013953 5 13.884599346127702 37.421431550004854 33.33549132771874 15.358477776148705 6 33.60965234644254 36.27436792858802 16.919501578512428 13.196478146457011 7 29.477025430401284 30.84484608566421 20.914508114859995 18.763620369074516 8 28.068620413230537 33.33073104598623 19.270001275755504 19.330647265027736 9 27.639637718345337 13.676675143262726 18.35486122152478 40.32882591686715 10 15.859810939750732 27.08099086687999 31.448474941281646 25.61072325208763 11 37.631264768774074 20.776249621557604 22.60372177866975 18.988763830998572 12 24.648142770777497 23.702176883053824 29.31275616339238 22.3369241827763 13 29.887761543024105 19.3151254863841 25.60253552853184 25.194577442059956 14 23.65133692894307 19.85452537475425 25.415692789580667 31.078444906722012 15 25.105493668475674 27.53184804341617 22.699990478910788 24.662667809197373 16 25.436759175512925 25.57518922264007 24.427381349074118 24.560670252772884 17 23.575295280275867 25.74103305730046 25.648112357881793 25.03555930454188 18 24.4765331274343 24.995882336700138 27.03005560987592 23.497528925989645 19 25.587705501753693 24.443331594240426 25.68805243174695 24.280910472258928 20 25.632552258870394 24.314036871589227 25.452421483165576 24.600989386374803 21 27.173211419344646 23.916607480497127 24.735851966662796 24.174329133495437 22 25.67193820767606 24.176922703423692 25.587300317891916 24.563838771008335 23 24.65032984337557 23.817081402622183 25.83907984694582 25.69350890705643 24 24.55426804944252 24.9515638105738 25.799756462363533 24.69441167762015 25 24.93440144412031 24.395046118926658 25.91952228256316 24.751030154389866 26 24.232259661617267 25.455064791628978 26.399946681392763 23.912728865360997 27 24.85982376212171 24.58332738256759 25.870692240677528 24.68615661463317 28 24.270996083987193 25.07495456073152 26.01182706323794 24.642222292043346 29 24.05214420775422 24.409750189942475 25.991842470566056 25.546263131737245 30 24.036735855829093 25.432325153835684 26.101556779957136 24.42938221037809 31 24.825924885624104 24.879720832361357 25.153270841168656 25.14108344084588 32 24.65312588961915 25.137745177847666 25.034251824939137 25.17487710759405 33 24.23743288828631 24.626845066319085 25.807935058616533 25.32778698677808 34 25.07554826043823 24.947968337328934 25.81265554753685 24.163827854695988 35 25.41118695093748 24.671788314531 25.97863684444542 23.938387890086098 36 24.03700036181517 25.708110372669623 25.302496524670083 24.952392740845124 37 25.075667919943868 25.347967701056735 25.35453717130036 24.221827207699036 38 24.55513269609248 25.016638784602247 25.626584731165803 24.801643788139476 39 25.14376735205292 24.706276635044198 25.222601370264723 24.927354642638157 40 25.69902239689848 25.2135531512181 25.270202337564406 23.81722211431901 41 24.022819755540702 25.360224236850172 26.515683821471214 24.101272186137912 42 25.75180560924198 25.91956113174997 25.170659349656965 23.157973909351085 43 24.48185480223891 24.75015066650291 25.846945682940554 24.92104884831763 44 24.23521727912439 25.71855919705312 24.920525053530746 25.125698470291745 45 24.45265342650951 25.67111601957461 25.21307386179713 24.663156692118744 46 24.210751807756573 25.335821428401417 24.956609081864357 25.496817681977657 47 24.693786423111234 25.315020341245457 25.38233258340958 24.60886065223373 48 25.411346910018757 25.415726485961553 24.358344520293624 24.814582083726066 49 24.48631408578093 25.95782358261532 24.854762698148235 24.701099633455513 50 24.74203542097877 25.957168073515387 24.355683598993846 24.945112906511998 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 56.0 1 46.5 2 37.0 3 97.5 4 158.0 5 200.5 6 243.0 7 230.0 8 217.0 9 307.5 10 398.0 11 603.5 12 809.0 13 1493.0 14 2177.0 15 3004.5 16 3832.0 17 4203.5 18 4575.0 19 4666.5 20 4758.0 21 5065.0 22 5372.0 23 6017.5 24 6663.0 25 6926.5 26 7190.0 27 9556.5 28 11923.0 29 13666.0 30 15409.0 31 17031.0 32 18653.0 33 21523.5 34 24394.0 35 28133.5 36 31873.0 37 36173.0 38 40473.0 39 42955.5 40 45438.0 41 48630.5 42 51823.0 43 52777.0 44 53731.0 45 59753.5 46 65776.0 47 70087.0 48 74398.0 49 77546.0 50 80694.0 51 77314.0 52 73934.0 53 73113.5 54 72293.0 55 73188.0 56 74083.0 57 72119.0 58 70155.0 59 63794.5 60 57434.0 61 50920.5 62 44407.0 63 38383.0 64 32359.0 65 27878.0 66 23397.0 67 20054.5 68 16712.0 69 15140.0 70 13568.0 71 10351.5 72 7135.0 73 6168.5 74 5202.0 75 4038.5 76 2875.0 77 2514.0 78 2153.0 79 1819.5 80 1486.0 81 1196.5 82 907.0 83 760.5 84 614.0 85 437.5 86 261.0 87 185.5 88 110.0 89 89.0 90 68.0 91 56.0 92 44.0 93 40.5 94 37.0 95 33.0 96 29.0 97 20.5 98 12.0 99 12.5 100 13.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008854124022476146 2 3.808225386011246E-4 3 1.904112693005623E-4 4 0.0 5 0.0 6 1.904112693005623E-4 7 9.520563465028115E-5 8 0.0 9 0.0014280845197542171 10 4.760281732514057E-4 11 0.0 12 2.856169039508434E-4 13 4.760281732514057E-4 14 2.856169039508434E-4 15 0.005521926809716306 16 7.616450772022492E-4 17 0.0 18 4.760281732514057E-4 19 1.904112693005623E-4 20 9.520563465028114E-4 21 0.0 22 9.520563465028115E-5 23 0.0010472619811530927 24 6.66439442551968E-4 25 0.0028561690395084343 26 0.006473983156219118 27 0.006950011329470524 28 0.005236309905765463 29 0.0038082253860112457 30 0.004665076097863776 31 0.008854124022476146 32 0.004665076097863776 33 0.005426721175066026 34 0.0034274028474101216 35 0.004284253559262651 36 0.009330152195727552 37 0.004284253559262651 38 0.009615769099678395 39 0.004760281732514057 40 0.003236991578109559 41 0.0038082253860112457 42 0.0019041126930056228 43 0.0023801408662570286 44 0.0025705521355575906 45 0.0017137014237050608 46 0.0021897295969564665 47 0.002760963404858153 48 0.002665757770207872 49 7.616450772022492E-4 50 0.0019041126930056228 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1050358.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.65775973737641 #Duplication Level Percentage of deduplicated Percentage of total 1 74.95819963685308 39.47130866823706 2 14.45464498368693 15.222984452801192 3 4.806719087571148 7.59333176515148 4 2.1339866510799186 4.494838254213395 5 1.0772743138753085 2.836342599564651 6 0.6398094744918952 2.021456015129477 7 0.3731556809330525 1.375467953384684 8 0.2631389876280617 1.108504767044395 9 0.19970580593388992 0.9464454312323307 >10 0.9197008629794697 8.548194532707148 >50 0.0779207409921485 2.88013610373099 >100 0.08445838673520391 9.105262833299472 >500 0.00946516349155706 3.3222188896287324 >1k 0.0018202237483763578 1.0735077338750123 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1235 0.11757895879309721 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 1223 0.11643649117729384 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1220 0.116150874273343 No Hit GTACATGGGGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1167 0.1111049756368781 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1080 0.10282208542230363 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1073 0.10215564597975167 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 1072 0.10206044034510138 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 1063 0.10120358963324885 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.904112693005623E-4 2 0.0 0.0 0.0 0.0 1.904112693005623E-4 3 0.0 0.0 0.0 0.0 1.904112693005623E-4 4 0.0 0.0 0.0 0.0 1.904112693005623E-4 5 0.0 0.0 0.0 9.520563465028115E-5 1.904112693005623E-4 6 0.0 0.0 0.0 9.520563465028115E-5 1.904112693005623E-4 7 0.0 0.0 0.0 9.520563465028115E-5 1.904112693005623E-4 8 0.0 0.0 0.0 9.520563465028115E-5 1.904112693005623E-4 9 0.0 0.0 0.0 9.520563465028115E-5 1.904112693005623E-4 10 0.0 0.0 0.0 1.904112693005623E-4 1.904112693005623E-4 11 0.0 0.0 0.0 1.904112693005623E-4 1.904112693005623E-4 12 0.0 0.0 0.0 1.904112693005623E-4 1.904112693005623E-4 13 0.0 0.0 0.0 1.904112693005623E-4 1.904112693005623E-4 14 0.0 0.0 0.0 1.904112693005623E-4 1.904112693005623E-4 15 0.0 0.0 0.0 2.856169039508434E-4 2.856169039508434E-4 16 0.0 0.0 0.0 2.856169039508434E-4 2.856169039508434E-4 17 0.0 0.0 0.0 4.760281732514057E-4 2.856169039508434E-4 18 0.0 0.0 0.0 6.66439442551968E-4 2.856169039508434E-4 19 0.0 0.0 0.0 6.66439442551968E-4 2.856169039508434E-4 20 0.0 0.0 0.0 6.66439442551968E-4 2.856169039508434E-4 21 0.0 0.0 0.0 9.520563465028114E-4 2.856169039508434E-4 22 0.0 0.0 0.0 0.001237673250453655 3.808225386011246E-4 23 0.0 0.0 0.0 0.0023801408662570286 3.808225386011246E-4 24 0.0 0.0 0.0 0.004189047924612371 3.808225386011246E-4 25 0.0 0.0 0.0 0.005521926809716306 3.808225386011246E-4 26 0.0 0.0 0.0 0.006759600060169961 3.808225386011246E-4 27 0.0 0.0 0.0 0.00752124513737221 4.760281732514057E-4 28 0.0 0.0 0.0 0.01085344235013205 4.760281732514057E-4 29 0.0 0.0 0.0 0.017137014237050607 4.760281732514057E-4 30 0.0 0.0 0.0 0.029037718568335747 4.760281732514057E-4 31 0.0 0.0 0.0 0.052934332865556315 4.760281732514057E-4 32 0.0 0.0 0.0 0.07921108802903391 4.760281732514057E-4 33 0.0 0.0 0.0 0.09872824313234155 4.760281732514057E-4 34 0.0 0.0 0.0 0.12376732504536549 4.760281732514057E-4 35 0.0 0.0 0.0 0.1534714830562532 4.760281732514057E-4 36 0.0 0.0 0.0 0.19621881301422944 4.760281732514057E-4 37 0.0 0.0 0.0 0.259054531883415 4.760281732514057E-4 38 0.0 0.0 0.0 0.3438827523568155 4.760281732514057E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTACC 95 2.687375E-8 23.15554 4 ATACCGT 395 0.0 20.048594 6 TTAGGAC 300 0.0 19.797985 3 TGTAGAA 910 0.0 19.580425 2 AAATTCG 80 8.981018E-5 19.251709 21 TTACACA 245 0.0 18.855225 4 CGGATTA 60 0.0074178562 18.330597 18 TACCGTC 420 0.0 18.330595 7 CCGTCGT 410 0.0 18.242046 9 ATACACT 665 0.0 18.19364 4 CGTCGTA 415 0.0 18.022263 10 TTTAGGA 320 0.0 17.873182 2 TAGGACG 345 0.0 17.853256 4 ACCGTCG 420 0.0 17.806864 8 GTATTAT 150 9.586074E-9 17.600723 1 TCTAGAT 280 0.0 17.283957 2 AGGTCGT 115 4.2720712E-6 17.21728 28 CTAGATA 295 0.0 17.150797 3 TAGAACA 955 0.0 17.045387 4 GTCGTAG 440 0.0 16.998272 11 >>END_MODULE