##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063913_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1696919 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.168319171392387 32.0 32.0 32.0 32.0 32.0 2 31.142890143843047 32.0 32.0 32.0 32.0 32.0 3 31.307662298554025 32.0 32.0 32.0 32.0 32.0 4 31.437531785547808 32.0 32.0 32.0 32.0 32.0 5 31.323955946041032 32.0 32.0 32.0 32.0 32.0 6 34.900905700272084 36.0 36.0 36.0 36.0 36.0 7 34.930119233740676 36.0 36.0 36.0 36.0 36.0 8 34.85402721049149 36.0 36.0 36.0 32.0 36.0 9 35.01862080629659 36.0 36.0 36.0 36.0 36.0 10 34.811247325299554 36.0 36.0 36.0 32.0 36.0 11 35.0217317385214 36.0 36.0 36.0 36.0 36.0 12 34.88142392182538 36.0 36.0 36.0 32.0 36.0 13 34.95147381813746 36.0 36.0 36.0 36.0 36.0 14 34.88244164865854 36.0 36.0 36.0 32.0 36.0 15 34.83230077569996 36.0 36.0 36.0 32.0 36.0 16 34.847091110418354 36.0 36.0 36.0 32.0 36.0 17 34.78754495647701 36.0 36.0 36.0 32.0 36.0 18 34.805548172894525 36.0 36.0 36.0 32.0 36.0 19 34.80606617051256 36.0 36.0 36.0 32.0 36.0 20 34.79466256197261 36.0 36.0 36.0 32.0 36.0 21 34.78281933315615 36.0 36.0 36.0 32.0 36.0 22 34.77103444536834 36.0 36.0 36.0 32.0 36.0 23 34.71015175149786 36.0 36.0 36.0 32.0 36.0 24 34.67580656472112 36.0 36.0 36.0 32.0 36.0 25 34.6422268829567 36.0 36.0 36.0 32.0 36.0 26 34.56190542978186 36.0 36.0 36.0 32.0 36.0 27 34.57804998352897 36.0 36.0 36.0 32.0 36.0 28 34.54506667672411 36.0 36.0 36.0 32.0 36.0 29 34.498562394551534 36.0 36.0 36.0 32.0 36.0 30 34.48678281049361 36.0 36.0 36.0 32.0 36.0 31 34.4894806410913 36.0 36.0 36.0 32.0 36.0 32 34.441884379867275 36.0 36.0 36.0 32.0 36.0 33 34.39404650428217 36.0 36.0 36.0 32.0 36.0 34 34.388013216894855 36.0 36.0 36.0 32.0 36.0 35 34.34139048475502 36.0 36.0 36.0 32.0 36.0 36 34.30975668255232 36.0 36.0 36.0 32.0 36.0 37 34.308644077884686 36.0 36.0 36.0 32.0 36.0 38 34.249930020230785 36.0 36.0 36.0 32.0 36.0 39 34.25679658251219 36.0 36.0 36.0 32.0 36.0 40 34.226258295180855 36.0 36.0 36.0 32.0 36.0 41 34.195663434730825 36.0 36.0 36.0 32.0 36.0 42 34.11174251687912 36.0 36.0 36.0 32.0 36.0 43 34.11375439841265 36.0 36.0 36.0 32.0 36.0 44 34.01443321690664 36.0 36.0 36.0 32.0 36.0 45 33.9864495594663 36.0 36.0 36.0 32.0 36.0 46 33.96169646282468 36.0 36.0 36.0 32.0 36.0 47 33.926662380467185 36.0 36.0 36.0 32.0 36.0 48 33.873999289300194 36.0 36.0 36.0 32.0 36.0 49 33.8433814460207 36.0 36.0 36.0 32.0 36.0 50 33.13861474825846 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 0.0 18 3.0 19 8.0 20 11.0 21 59.0 22 196.0 23 530.0 24 1542.0 25 3426.0 26 7116.0 27 13197.0 28 22209.0 29 35170.0 30 52216.0 31 75607.0 32 111922.0 33 182355.0 34 358826.0 35 832525.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.57125934552175 18.302194363278684 12.007293720775907 26.119252570423658 2 16.277381338937236 20.456145954447873 36.38607282754036 26.880399879074528 3 18.161412118844183 24.545777592342795 28.58629592241432 28.70651436639871 4 12.083605640575655 15.618895185922252 35.82451490023979 36.472984273262306 5 14.523557105554245 36.68772640296915 32.62618899311045 16.162527498366156 6 34.809542498912734 35.86251277318709 16.168291380706385 13.159653347193789 7 30.5179743511472 30.315725332632454 20.50046024616393 18.66584007005642 8 28.728242184806703 32.321578107145946 18.89312336063183 20.05705634741552 9 27.38165885337631 13.490758119977961 18.40874067045987 40.71884235618586 10 16.028954009021167 26.255202139433248 30.715635235588707 27.000208615956883 11 38.44744504599218 20.638698723981523 21.904522254745217 19.009333975281084 12 25.0558218885448 23.506657669948112 28.205891279174267 23.23162916233282 13 29.511877471403903 18.761395713384918 25.416610191465665 26.310116623745515 14 23.946705607944775 19.66558116675329 24.723115019382245 31.664598205919685 15 25.306067124377524 27.052302796357957 22.104723458172497 25.536906621092026 16 26.34885594386473 25.41916116497073 23.340725239716402 24.89125765144814 17 24.062197429576777 25.867410288882382 24.703889814422492 25.366502467118345 18 25.35825306512112 24.400927565611713 25.98503755344257 24.255781815824598 19 25.835956716824267 24.477670694753666 25.122427836819455 24.563944751602612 20 26.284149752990892 23.536670672007382 24.381504872706188 25.797674702295538 21 27.91028917703202 23.61686091086257 23.947577933890777 24.525271978214636 22 26.463034748880027 23.737269567533613 24.698895291345842 25.10080039224052 23 24.640758367572076 23.381291148371037 25.60227189688539 26.375678587171492 24 25.136188558982436 24.70316669338186 24.97524915847139 25.185395589164315 25 25.197846655214377 24.012976642632573 25.182170965204094 25.607005736948956 26 24.844400938456378 25.48771856209435 25.54865575729788 24.119224742151392 27 25.655340435212054 24.181767391862934 24.74187130339669 25.42102086952832 28 24.572120943532106 24.386955184228736 25.75513095379814 25.285792918441025 29 24.475083520489555 24.44349630411889 25.65860230103442 25.422817874357133 30 24.24823528441122 24.849929929977122 25.947065014844945 24.954769770766717 31 25.312765205091935 24.620815652993873 24.51049033474776 25.555928807166435 32 25.09816609296298 24.591350304590396 24.159967563789543 26.15051603865708 33 24.370645257673452 24.100498745622055 25.216385352448672 26.31247064425582 34 25.60049879749965 24.326867941829743 25.23948349943219 24.833149761238413 35 26.225915285451194 24.014615101289134 25.41082872928177 24.3486408839779 36 24.411953295725375 25.251413834479408 24.735384876509016 25.6012479932862 37 25.877396401721526 25.006084743235625 24.566215266134588 24.550303588908264 38 24.705532904996126 24.53297218165552 25.13092337667389 25.630571536674456 39 25.810339269623555 24.42235647089815 24.151619676683456 25.615684582794835 40 25.952851142773127 24.896383423469295 24.885834657822205 24.26493077593538 41 24.42227692401983 25.36995904829873 25.591247921917738 24.616516105763704 42 26.527141321565967 25.580707362148296 24.389650279097836 23.5025010371879 43 25.262478637515468 24.177735871294715 25.05781130296423 25.50197418822559 44 24.758030488394187 25.107253899445343 24.293833254366177 25.840882357794293 45 24.930255253397075 25.461753242084693 24.50477399401969 25.103217510498542 46 24.556178321878193 25.027152310465677 24.523884309647716 25.892785058008418 47 25.16229671658538 24.714713723678347 25.082032327337274 25.040957232399 48 26.399016081782605 25.365890167241346 23.65163543402073 24.583458316955323 49 25.026828096869906 25.750730001208073 23.988649991307756 25.23379191061426 50 25.279273970180917 25.724026165360364 23.838764806411692 25.157935058047027 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 28.0 1 22.0 2 16.0 3 76.0 4 136.0 5 167.0 6 198.0 7 197.0 8 196.0 9 305.5 10 415.0 11 641.5 12 868.0 13 1585.5 14 2303.0 15 3326.5 16 4350.0 17 4885.0 18 5420.0 19 5827.5 20 6235.0 21 6807.5 22 7380.0 23 8456.0 24 9532.0 25 10069.5 26 10607.0 27 13137.5 28 15668.0 29 17527.5 30 19387.0 31 21616.5 32 23846.0 33 27445.5 34 31045.0 35 35929.0 36 40813.0 37 50504.5 38 60196.0 39 65858.0 40 71520.0 41 78084.5 42 84649.0 43 85271.5 44 85894.0 45 95843.5 46 105793.0 47 114377.5 48 122962.0 49 127387.5 50 131813.0 51 125214.5 52 118616.0 53 117492.5 54 116369.0 55 120149.5 56 123930.0 57 122542.5 58 121155.0 59 110931.5 60 100708.0 61 89045.0 62 77382.0 63 67533.5 64 57685.0 65 49705.5 66 41726.0 67 36535.5 68 31345.0 69 28792.5 70 26240.0 71 19930.5 72 13621.0 73 11701.5 74 9782.0 75 7566.0 76 5350.0 77 4800.5 78 4251.0 79 3589.0 80 2927.0 81 2402.0 82 1877.0 83 1604.0 84 1331.0 85 963.5 86 596.0 87 428.0 88 260.0 89 208.0 90 156.0 91 141.5 92 127.0 93 101.5 94 76.0 95 60.5 96 45.0 97 43.0 98 41.0 99 47.0 100 53.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006894848840751974 2 3.535819918334346E-4 3 4.714426557779128E-4 4 0.0 5 0.0 6 2.946516598611955E-4 7 5.89303319722391E-5 8 0.0 9 0.0014143279673337384 10 0.001237536971417021 11 0.0 12 2.357213278889564E-4 13 5.303729877501519E-4 14 2.946516598611955E-4 15 0.004066192906084498 16 0.0010607459755003039 17 0.0 18 2.357213278889564E-4 19 5.89303319722391E-5 20 0.0010607459755003039 21 0.0 22 5.89303319722391E-5 23 6.4823365169463E-4 24 4.125123238056737E-4 25 0.0014143279673337384 26 0.005303729877501519 27 0.005362660209473758 28 0.003594750250306585 29 0.001767909959167173 30 0.0026518649387507593 31 0.007012709504696452 32 0.002946516598611955 33 0.003653680582278824 34 0.0022393526149450857 35 0.00259293460677852 36 0.006776988176807496 37 0.0030643772625564333 38 0.007366291496529888 39 0.004007262574112259 40 0.0022393526149450857 41 0.002475073942834042 42 0.0013553976353614995 43 0.0011196763074725429 44 6.4823365169463E-4 45 0.0010018156435280647 46 5.89303319722391E-4 47 0.0015911189632504558 48 0.001767909959167173 49 2.357213278889564E-4 50 0.0011196763074725429 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1696919.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.4127400210715 #Duplication Level Percentage of deduplicated Percentage of total 1 69.85901524442978 29.629122516900708 2 15.528107118611459 13.171791404820349 3 6.090510240062862 7.749456822223798 4 2.983239864109399 5.061095071078744 5 1.6738122977562422 3.5495482914403906 6 1.000372331730243 2.545711897796874 7 0.6042045841838014 1.7938180363969027 8 0.43085284107526073 1.4618919628692053 9 0.2873566052987011 1.096882289448432 >10 1.3129003131773005 9.540414025335965 >50 0.09444549313700183 2.8413241744291615 >100 0.10644472197648024 9.597668057896856 >500 0.01925190065199844 5.552849177723058 >1k 0.009486443799535463 6.408426271639554 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2819 0.166124605829742 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2804 0.16524065085015843 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2797 0.16482813852635275 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2710 0.15970119964476795 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2620 0.15439746976726645 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2596 0.1529831417999327 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2513 0.14809192424623685 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2456 0.14473289532381922 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2433 0.14337749768845773 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2365 0.1393702351143455 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 2110 0.12434300046142449 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 2067 0.12180899618661821 No Hit CTTTAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1929 0.11367661037444922 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATGGGGTTCA 1899 0.11190870041528204 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 1872 0.11031758145203159 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCT 1848 0.10890325348469786 No Hit GAATAATGGAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAG 1804 0.10631031887791934 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGAT 1801 0.10613352788200262 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 1800 0.10607459755003039 No Hit CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAACCGCGGTC 1753 0.10330487194733515 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.89303319722391E-5 2 0.0 0.0 0.0 0.0 5.89303319722391E-5 3 0.0 0.0 0.0 0.0 5.89303319722391E-5 4 0.0 0.0 0.0 0.0 5.89303319722391E-5 5 0.0 0.0 0.0 0.0 5.89303319722391E-5 6 0.0 0.0 0.0 0.0 1.767909959167173E-4 7 0.0 0.0 0.0 0.0 2.357213278889564E-4 8 0.0 0.0 0.0 0.0 2.357213278889564E-4 9 0.0 0.0 0.0 0.0 2.357213278889564E-4 10 0.0 0.0 0.0 0.0 2.357213278889564E-4 11 0.0 0.0 0.0 0.0 2.357213278889564E-4 12 0.0 0.0 0.0 0.0 5.303729877501519E-4 13 0.0 0.0 0.0 0.0 5.303729877501519E-4 14 0.0 0.0 0.0 0.0 5.303729877501519E-4 15 0.0 0.0 0.0 0.0 5.303729877501519E-4 16 0.0 0.0 0.0 0.0 5.303729877501519E-4 17 0.0 0.0 0.0 0.0 5.89303319722391E-4 18 0.0 0.0 0.0 0.0 6.482336516946301E-4 19 0.0 0.0 0.0 0.0 6.482336516946301E-4 20 0.0 0.0 0.0 5.89303319722391E-5 8.839549795835865E-4 21 0.0 0.0 0.0 5.89303319722391E-5 8.839549795835865E-4 22 0.0 0.0 0.0 5.89303319722391E-5 8.839549795835865E-4 23 0.0 0.0 0.0 1.767909959167173E-4 8.839549795835865E-4 24 0.0 0.0 0.0 2.946516598611955E-4 8.839549795835865E-4 25 0.0 0.0 0.0 4.125123238056737E-4 8.839549795835865E-4 26 0.0 0.0 0.0 4.714426557779128E-4 0.0010018156435280647 27 0.0 0.0 0.0 8.250246476113474E-4 0.0011196763074725429 28 0.0 0.0 0.0 0.0016500492952226948 0.0011196763074725429 29 5.89303319722391E-5 0.0 0.0 0.0034179592543898676 0.0011196763074725429 30 5.89303319722391E-5 0.0 0.0 0.00654126684891854 0.0011196763074725429 31 5.89303319722391E-5 0.0 0.0 0.016559423284199185 0.001178606639444782 32 5.89303319722391E-5 0.0 0.0 0.023925714780729076 0.001178606639444782 33 5.89303319722391E-5 0.0 0.0 0.0327063342445927 0.001178606639444782 34 5.89303319722391E-5 0.0 0.0 0.04307807267170678 0.0013553976353614992 35 5.89303319722391E-5 0.0 0.0 0.05680884002123849 0.0013553976353614992 36 5.89303319722391E-5 0.0 0.0 0.07784696853532785 0.0013553976353614992 37 5.89303319722391E-5 0.0 0.0 0.10760678618130859 0.0013553976353614992 38 5.89303319722391E-5 0.0 0.0 0.15145095316865448 0.0014143279673337384 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACTAG 85 2.3528082E-7 23.295162 1 GTATCAA 4095 0.0 20.093699 1 TCGGCTA 55 0.0044862404 19.998539 12 CGCCCCT 445 0.0 19.775003 5 ATACCGT 705 0.0 18.099035 6 TACCGTC 705 0.0 18.098503 7 AACGCAG 4465 0.0 17.98407 6 CGCAATA 850 0.0 17.860151 36 CGTCGTA 690 0.0 17.85482 10 GATATAC 385 0.0 17.71508 1 CGGTCCA 860 0.0 17.650913 10 ACCGTAT 75 0.0012915386 17.599234 8 CCGGTCC 865 0.0 17.548368 9 CGCGGGA 485 0.0 17.23687 44 ACCGTCG 715 0.0 17.23002 8 GGTCTAG 115 4.2731117E-6 17.218164 1 CCGTCGT 720 0.0 17.110367 9 CCGCCCC 530 0.0 17.01863 4 TCCCCGC 505 0.0 16.990862 1 TAGCGGC 875 0.0 16.845974 30 >>END_MODULE