##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063912_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 84986 Sequences flagged as poor quality 0 Sequence length 25 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.338514578871813 32.0 32.0 32.0 32.0 32.0 2 31.01803826512602 32.0 32.0 32.0 32.0 32.0 3 31.031416939260584 32.0 32.0 32.0 32.0 32.0 4 31.068081801708516 32.0 32.0 32.0 32.0 32.0 5 31.03938295719295 32.0 32.0 32.0 32.0 32.0 6 34.68303014614172 36.0 36.0 36.0 32.0 36.0 7 34.64130562680912 36.0 36.0 36.0 32.0 36.0 8 34.60506436354223 36.0 36.0 36.0 32.0 36.0 9 34.68500694231991 36.0 36.0 36.0 32.0 36.0 10 34.54464264702422 36.0 36.0 36.0 32.0 36.0 11 34.72515473136752 36.0 36.0 36.0 32.0 36.0 12 34.56544607347092 36.0 36.0 36.0 32.0 36.0 13 34.62444402607488 36.0 36.0 36.0 32.0 36.0 14 34.53760619396136 36.0 36.0 36.0 32.0 36.0 15 34.49285764714188 36.0 36.0 36.0 32.0 36.0 16 34.48296189960699 36.0 36.0 36.0 32.0 36.0 17 34.47070105664462 36.0 36.0 36.0 32.0 36.0 18 34.436718989009954 36.0 36.0 36.0 32.0 36.0 19 34.45148612712682 36.0 36.0 36.0 32.0 36.0 20 34.40932624196927 36.0 36.0 36.0 32.0 36.0 21 34.415786129480146 36.0 36.0 36.0 32.0 36.0 22 34.36567199303415 36.0 36.0 36.0 32.0 36.0 23 34.31699338714612 36.0 36.0 36.0 32.0 36.0 24 34.34162097286612 36.0 36.0 36.0 32.0 36.0 25 33.95835784717483 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 5 2.0 6 2.0 7 1.0 8 4.0 9 8.0 10 10.0 11 3.0 12 9.0 13 7.0 14 10.0 15 7.0 16 31.0 17 32.0 18 43.0 19 43.0 20 55.0 21 113.0 22 145.0 23 228.0 24 360.0 25 504.0 26 750.0 27 987.0 28 1460.0 29 1954.0 30 2494.0 31 3437.0 32 4882.0 33 7093.0 34 16678.0 35 43634.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.49173072169317 18.96107259308088 13.403882146598708 25.143314538627244 2 15.121847898991565 21.404280856171233 38.93719920454679 24.536672040290412 3 18.181818181818183 26.292565834372724 28.905937448520934 26.619678535288166 4 11.8847298871539 17.788263535059954 37.147429485897185 33.179577091888966 5 13.395074077124935 37.74461925887572 34.01075559844197 14.849551065557373 6 30.4814470478858 38.04267237828487 18.49764042695915 12.978240146870181 7 28.528553269620073 31.69224612777176 21.742149616308083 18.03705098630008 8 27.699298394311818 32.621132928379716 20.238263408202663 19.441305269105804 9 27.752790467668255 15.076767296189894 19.974803372109452 37.195638864032404 10 15.188159382064809 28.872692162773173 33.311746420497364 22.627402034664655 11 34.370290128108515 23.286784099472495 22.986529766390355 19.356396006028636 12 23.251377702416278 26.732136969525694 28.62677217276624 21.38971315529179 13 28.335766767143934 22.263564431047474 26.03146194423512 23.369206857573474 14 23.0723941406434 20.972869860110215 27.309123451556687 28.645612547689698 15 24.781866352664114 28.739476008242566 23.11569031498381 23.36296732410951 16 23.062067991003616 29.1169647798594 24.736526029461984 23.084441199675 17 22.29208614457122 28.51390017308983 26.029413496296822 23.16460018604213 18 22.59735977483896 28.377121188925656 26.40107398989602 22.624445046339368 19 24.79539325710383 26.665410567717473 26.555894440584556 21.983301734594143 20 25.48165245654529 25.927975882048145 26.238871355221633 22.351500306184935 21 26.74508972728557 25.794828317083514 25.180161085205594 22.27992087042532 22 25.09774825701903 26.017524024872806 26.10702845298662 22.777699265121537 23 24.5445230888813 26.600793772302765 25.53968272661964 23.315000412196298 24 23.906489223884112 26.13473089153221 26.244258626781296 23.714521257802378 25 23.073480396198192 25.7458160104585 27.37936801441577 23.80133557892753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 4.0 1 4.0 2 7.0 3 10.0 4 10.0 5 10.0 6 22.0 7 34.0 8 34.0 9 34.0 10 60.0 11 86.0 12 86.0 13 86.0 14 136.5 15 187.0 16 187.0 17 187.0 18 478.5 19 770.0 20 770.0 21 770.0 22 1103.5 23 1437.0 24 1437.0 25 1437.0 26 2205.0 27 2973.0 28 2973.0 29 2973.0 30 4061.0 31 5149.0 32 5149.0 33 5149.0 34 6032.5 35 6916.0 36 6916.0 37 6916.0 38 7630.0 39 8344.0 40 8344.0 41 8344.0 42 9385.5 43 10427.0 44 10427.0 45 10427.0 46 11823.0 47 13219.0 48 13219.0 49 13219.0 50 12819.0 51 12419.0 52 12419.0 53 12419.0 54 10930.5 55 9442.0 56 9442.0 57 9442.0 58 7850.0 59 6258.0 60 6258.0 61 6258.0 62 4910.5 63 3563.0 64 3563.0 65 3563.0 66 2741.0 67 1919.0 68 1919.0 69 1919.0 70 1483.0 71 1047.0 72 1047.0 73 1047.0 74 646.0 75 245.0 76 245.0 77 245.0 78 224.0 79 203.0 80 203.0 81 203.0 82 126.5 83 50.0 84 50.0 85 50.0 86 39.5 87 29.0 88 29.0 89 29.0 90 18.0 91 7.0 92 7.0 93 7.0 94 7.0 95 7.0 96 7.0 97 7.0 98 124.0 99 241.0 100 241.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0388299249288118 2 0.003529993175346528 3 0.0 4 0.003529993175346528 5 0.00823665074247523 6 0.015296637093168287 7 0.025886616619207874 8 0.044713246887722685 9 0.0635398771562375 10 0.0682465347233662 11 0.0682465347233662 12 0.0729531922904949 13 0.0682465347233662 14 0.0729531922904949 15 0.07177652789871274 16 0.07412985668227709 17 0.06942319911514838 18 0.08118984303297014 19 0.07883651424940578 20 0.08236650742475231 21 0.0729531922904949 22 0.08707316499188102 23 0.08824982938366319 24 0.08942649377544537 25 0.0929564869507919 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 84986.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.13486927258607 #Duplication Level Percentage of deduplicated Percentage of total 1 56.16477272727273 18.610124020426895 2 14.691051136363637 9.735721177605724 3 7.613636363636364 7.568305367942956 4 4.815340909090909 6.382227661026523 5 3.5546875 5.88920528086979 6 2.723721590909091 5.415009530981574 7 1.960227272727273 4.5466312098463275 8 1.6015624999999998 4.24540512555009 9 1.0511363636363635 3.1346339397077165 >10 5.7350852272727275 32.31826418468924 >50 0.08167613636363635 1.7438166286211847 >100 0.007102272727272727 0.41065587273197934 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGGGGGGGGGGGGGGGGGGGGGGGG 234 0.27533946767702916 No Hit GTATTGGAATTAGTGAAATTGGAGT 115 0.13531640505495024 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTGAAA 25 0.0059798295 19.003532 11 GGTATCA 35 9.830012E-5 18.992348 1 GTATAGT 35 0.002153361 16.279156 1 GTATCAA 150 0.0 14.560801 1 GAGAGAT 60 0.00579048 11.085395 7 TATCAAC 235 5.456968E-12 9.294128 2 TCAACGC 250 2.3646862E-11 8.73648 4 ATCAACG 250 2.3646862E-11 8.73648 3 CAACGCA 265 9.094947E-12 8.600309 5 AACGCAG 260 5.2750693E-11 8.400462 6 CATGGGG 175 1.6956976E-4 7.0543013 4 AGTACAT 315 3.0395313E-9 6.937798 13 GCAGAGT 315 3.0395313E-9 6.937798 9 ACGCAGA 320 4.2200554E-9 6.8293953 7 CAGAGTA 320 4.2200554E-9 6.8293953 10 AGAGTAC 325 5.826223E-9 6.7243276 11 CGCAGAG 325 5.826223E-9 6.7243276 8 GAGTACA 315 2.2399036E-8 6.6361547 12 GTACATG 445 3.0649971E-9 5.761724 1 TACATGG 435 1.1172233E-8 5.675874 2 >>END_MODULE