##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063912_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 84986 Sequences flagged as poor quality 0 Sequence length 50 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.34875155908032 32.0 32.0 32.0 32.0 32.0 2 31.499929400136494 32.0 32.0 32.0 32.0 32.0 3 31.54353658249594 32.0 32.0 32.0 32.0 32.0 4 31.594721483538464 32.0 32.0 32.0 32.0 32.0 5 31.59794554397195 32.0 32.0 32.0 32.0 32.0 6 35.15451956792884 36.0 36.0 36.0 36.0 36.0 7 35.170839903042854 36.0 36.0 36.0 36.0 36.0 8 35.14980114371779 36.0 36.0 36.0 36.0 36.0 9 35.20012707975431 36.0 36.0 36.0 36.0 36.0 10 35.119478502341565 36.0 36.0 36.0 36.0 36.0 11 35.21756524604052 36.0 36.0 36.0 36.0 36.0 12 35.15187207304732 36.0 36.0 36.0 36.0 36.0 13 35.17346386463653 36.0 36.0 36.0 36.0 36.0 14 35.130492081048644 36.0 36.0 36.0 36.0 36.0 15 35.12262019626762 36.0 36.0 36.0 36.0 36.0 16 35.12294966229732 36.0 36.0 36.0 36.0 36.0 17 35.11768997246605 36.0 36.0 36.0 36.0 36.0 18 35.08835572917892 36.0 36.0 36.0 36.0 36.0 19 35.07750688348669 36.0 36.0 36.0 36.0 36.0 20 35.07384745722825 36.0 36.0 36.0 36.0 36.0 21 35.09326241969266 36.0 36.0 36.0 36.0 36.0 22 35.069776198432685 36.0 36.0 36.0 36.0 36.0 23 35.02721624738192 36.0 36.0 36.0 36.0 36.0 24 35.039147624314595 36.0 36.0 36.0 36.0 36.0 25 34.97509001482597 36.0 36.0 36.0 36.0 36.0 26 34.94208457863648 36.0 36.0 36.0 36.0 36.0 27 34.928529404843154 36.0 36.0 36.0 36.0 36.0 28 34.93702492175182 36.0 36.0 36.0 36.0 36.0 29 34.898324429906104 36.0 36.0 36.0 36.0 36.0 30 34.88772268373614 36.0 36.0 36.0 36.0 36.0 31 34.86839008777916 36.0 36.0 36.0 32.0 36.0 32 34.84928105805662 36.0 36.0 36.0 32.0 36.0 33 34.86105946861836 36.0 36.0 36.0 36.0 36.0 34 34.80052008566117 36.0 36.0 36.0 32.0 36.0 35 34.79699009248582 36.0 36.0 36.0 32.0 36.0 36 34.76229025957217 36.0 36.0 36.0 32.0 36.0 37 34.74486385992987 36.0 36.0 36.0 32.0 36.0 38 34.73736850775422 36.0 36.0 36.0 32.0 36.0 39 34.71841244440261 36.0 36.0 36.0 32.0 36.0 40 34.712493822511945 36.0 36.0 36.0 32.0 36.0 41 34.69923281481656 36.0 36.0 36.0 32.0 36.0 42 34.664509448615064 36.0 36.0 36.0 32.0 36.0 43 34.663497517238135 36.0 36.0 36.0 32.0 36.0 44 34.62223189701833 36.0 36.0 36.0 32.0 36.0 45 34.62011390111312 36.0 36.0 36.0 32.0 36.0 46 34.5772480173205 36.0 36.0 36.0 32.0 36.0 47 34.58912056103358 36.0 36.0 36.0 32.0 36.0 48 34.59781611088885 36.0 36.0 36.0 32.0 36.0 49 34.5683995010943 36.0 36.0 36.0 32.0 36.0 50 33.9825030004942 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 1.0 19 0.0 20 1.0 21 3.0 22 13.0 23 28.0 24 70.0 25 140.0 26 293.0 27 554.0 28 846.0 29 1392.0 30 1921.0 31 2638.0 32 3706.0 33 5837.0 34 12177.0 35 55365.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.47753536209372 20.01812233754619 13.73178940431641 25.77255289604368 2 14.50491263164088 22.378066717656058 37.91374948520327 25.203271165499796 3 17.182830113195113 26.950321229378954 29.38130986280093 26.485538794624997 4 11.445414538865224 18.71484715129551 36.731932318264185 33.107805991575084 5 13.030381474595815 38.367495822841406 33.86910785305815 14.733014849504626 6 30.24968818393618 38.49928223472101 18.301837949779966 12.949191631562845 7 28.176737071247864 31.935047361299052 21.742660469494616 18.145555097958464 8 27.512766808650834 33.21488245122726 20.213917586426 19.0584331536959 9 27.94963817144202 14.622580455374479 20.012943460610696 37.41483791257281 10 14.957757748335021 29.677829289530038 33.253712376156074 22.11070058597887 11 34.51627326853835 23.16734520979926 23.087332031158073 19.22904949050432 12 22.97201892076342 27.333913821099948 28.28701197844351 21.407055279693125 13 28.471748287953307 21.98126750288283 26.191372696679455 23.35561151248441 14 22.617842938836986 20.8740263102158 27.490410185206976 29.01772056574024 15 24.132777934670056 29.04076061376259 23.074931751859175 23.75152969970818 16 23.17911185371708 29.434259760431132 24.569929164803614 22.81669922104817 17 22.228367025157084 28.761207728331723 25.565387240251336 23.445038006259857 18 22.320146847716092 28.388205116136778 26.66674511095945 22.62490292518768 19 24.726425528910646 26.86207139999529 26.414938931118066 21.996564139975998 20 25.801023710066485 25.560981349649936 26.238748014355473 22.399246925928104 21 26.38434565693173 26.057232956016286 25.272397806697573 22.28602358035441 22 25.13472807285906 26.31962911538371 25.903089920692818 22.642552891064412 23 24.454014873387933 26.466158335686718 25.443612915372306 23.636213875553043 24 23.765090720824606 26.791471536488366 26.039582990139554 23.403854752547478 25 22.67367975148263 25.997834886566885 27.509884213499014 23.818601148451474 26 23.560560595897904 26.815405796589825 26.68949529894918 22.93453830856309 27 23.22004377809683 26.89763927789677 26.49045590415892 23.391861039847484 28 22.719463403153682 26.107319369263355 27.591197928924455 23.58201929865851 29 23.56796573472654 26.550880165678247 26.323778593617618 23.557375505977596 30 23.386404019722058 26.643602687659595 26.084654216824937 23.885339075793414 31 24.094471510273248 25.657228929840663 26.410365035656287 23.8379345242298 32 22.29883975430091 27.071615165564474 26.552681744369394 24.076863335765218 33 23.10489280082841 27.377562307312136 26.22673036643054 23.290814525428914 34 22.98631458796672 26.73068097574752 26.790694390510822 23.49231004577494 35 23.352905875292706 26.919501547368295 26.857136133108973 22.870456444230022 36 23.889150388326666 25.737820663685575 26.039068016003764 24.333960931984 37 24.093053904898625 25.795747384771072 26.69475071484885 23.416447995481448 38 23.40723481371649 26.551578055496716 26.013791804937746 24.027395325849042 39 22.799213941939964 26.336475212106237 26.7765735870371 24.0877372589167 40 22.770436440229222 26.375863407975714 26.52295164915336 24.330748502641704 41 23.358789404939813 26.495887412776675 26.521774943223942 23.623548239059577 42 23.591777178965202 25.58276361154584 26.592377298989213 24.233081910499745 43 23.812717688035395 25.557752047444225 26.93212840064012 23.69740186388026 44 22.09853735452973 26.844192367885345 27.43960556817246 23.61766470941247 45 23.019898097266513 25.833401974512547 26.74299565795512 24.40370427026582 46 22.473906546015083 25.911064565854346 27.194850734852853 24.420178153277714 47 22.07290955731802 26.751547386505376 27.229295615542114 23.946247440634487 48 22.4082746934645 25.62778000047069 27.069261726012567 24.894683580052245 49 22.640732373152595 25.391838463710815 28.25590699425774 23.711522168878847 50 22.497175939000282 25.454203144121244 28.088816718441116 23.959804198437354 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 0.5 2 1.0 3 1.5 4 2.0 5 2.0 6 2.0 7 1.0 8 0.0 9 4.5 10 9.0 11 11.0 12 13.0 13 30.5 14 48.0 15 65.0 16 82.0 17 77.0 18 72.0 19 75.5 20 79.0 21 104.0 22 129.0 23 204.0 24 279.0 25 438.0 26 597.0 27 831.5 28 1066.0 29 1311.0 30 1556.0 31 1877.0 32 2198.0 33 2528.0 34 2858.0 35 3333.0 36 3808.0 37 4027.0 38 4246.0 39 4674.5 40 5103.0 41 5682.5 42 6262.0 43 5990.5 44 5719.0 45 6108.0 46 6497.0 47 6885.5 48 7274.0 49 7230.0 50 7186.0 51 7147.5 52 7109.0 53 6781.0 54 6453.0 55 5763.5 56 5074.0 57 4345.0 58 3616.0 59 2982.5 60 2349.0 61 2220.5 62 2092.0 63 1685.0 64 1278.0 65 927.0 66 576.0 67 510.0 68 444.0 69 347.5 70 251.0 71 222.5 72 194.0 73 183.5 74 173.0 75 162.0 76 151.0 77 107.0 78 63.0 79 47.0 80 31.0 81 24.5 82 18.0 83 14.0 84 10.0 85 7.5 86 5.0 87 6.0 88 7.0 89 4.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 2.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009413315134257407 2 0.001176664391782176 3 0.0 4 0.0 5 0.0 6 0.0 7 0.001176664391782176 8 0.0 9 0.001176664391782176 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.002353328783564352 16 0.0 17 0.0 18 0.0 19 0.0 20 0.001176664391782176 21 0.0 22 0.0 23 0.002353328783564352 24 0.0 25 0.002353328783564352 26 0.00588332195891088 27 0.014119972701386112 28 0.007059986350693056 29 0.002353328783564352 30 0.00588332195891088 31 0.009413315134257407 32 0.004706657567128704 33 0.004706657567128704 34 0.00588332195891088 35 0.003529993175346528 36 0.007059986350693056 37 0.003529993175346528 38 0.009413315134257407 39 0.00588332195891088 40 0.003529993175346528 41 0.003529993175346528 42 0.003529993175346528 43 0.002353328783564352 44 0.003529993175346528 45 0.003529993175346528 46 0.003529993175346528 47 0.004706657567128704 48 0.004706657567128704 49 0.002353328783564352 50 0.002353328783564352 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 84986.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.2027628079919 #Duplication Level Percentage of deduplicated Percentage of total 1 62.047617580928325 23.703904172451935 2 13.46906089259864 10.29110677052691 3 6.831552037453415 7.829524862918598 4 4.244309606677549 6.485774127503354 5 2.861366926417593 5.465606099828206 6 2.1190747528259464 4.8572706092768225 7 1.5677457110296606 4.192455227919893 8 1.1642590938491393 3.5582331207493 9 0.9609757600024641 3.3040736121243497 >10 4.693996981550497 29.340126609088557 >50 0.040040656666769335 0.9719247876120773 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATAGTAGGGGTGAAATGGAATTTTATCTGCATCTGAGTTTAATCCTGT 97 0.11413644600287107 No Hit GTATTGGAATTAGTGAAATTGGAGTTCCTTGTGGAAGGAAGTGGGCAAGT 86 0.10119313769326713 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.001176664391782176 0.0 18 0.0 0.0 0.0 0.001176664391782176 0.0 19 0.0 0.0 0.0 0.001176664391782176 0.0 20 0.0 0.0 0.0 0.001176664391782176 0.0 21 0.0 0.0 0.0 0.001176664391782176 0.0 22 0.0 0.0 0.0 0.001176664391782176 0.0 23 0.0 0.0 0.0 0.001176664391782176 0.0 24 0.0 0.0 0.0 0.002353328783564352 0.0 25 0.0 0.0 0.0 0.002353328783564352 0.0 26 0.0 0.0 0.0 0.002353328783564352 0.0 27 0.0 0.0 0.0 0.002353328783564352 0.0 28 0.0 0.0 0.0 0.0035299931753465276 0.0 29 0.0 0.0 0.0 0.011766643917821758 0.0 30 0.0 0.0 0.0 0.024709952227425693 0.0 31 0.0 0.0 0.0 0.08236650742475231 0.0 32 0.0 0.0 0.0 0.15296637093168286 0.0 33 0.0 0.0 0.0 0.23180288518108866 0.0 34 0.0 0.0 0.0 0.31299272821405877 0.0 35 0.0 0.0 0.0 0.41771585908267245 0.0 36 0.0 0.0 0.0 0.5647989080554444 0.0 37 0.0 0.0 0.0 0.8013084508036618 0.0 38 0.0 0.0 0.0 1.1095945214505918 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTTAC 20 7.793192E-4 44.025326 1 GTAGACT 20 7.8158465E-4 43.999413 4 GGTATCA 75 1.8189894E-12 35.22026 1 TAGGTCC 25 0.0023406933 35.19953 4 GTTTGGG 35 3.193187E-4 31.42815 20 GCCCAGA 30 0.005699314 29.350216 1 TGTTTGG 30 0.005715755 29.332941 19 TGCATCT 30 0.005715755 29.332941 30 GTATCAA 200 0.0 28.61646 1 AAACCAC 45 0.0013876625 24.444117 19 GTTTCGT 50 0.002561122 21.999706 11 TATAGTA 50 0.002561122 21.999706 2 GAATTTT 50 0.002561122 21.999706 20 TATCAAC 270 0.0 20.370098 2 CTTCTAG 65 4.8615207E-4 20.31938 1 GGAATTT 55 0.0044503217 19.999733 19 ATAGTAG 55 0.0044503217 19.999733 3 CCCTACA 60 0.0073575126 18.333088 2 ATGGAAT 60 0.0073575126 18.333088 17 AAAGCTC 60 0.0073575126 18.333088 40 >>END_MODULE