##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063911_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1868356 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.19499335244461 32.0 32.0 32.0 32.0 32.0 2 30.681569251256185 32.0 32.0 32.0 32.0 32.0 3 30.708981050720528 32.0 32.0 32.0 32.0 32.0 4 30.741339980175084 32.0 32.0 32.0 32.0 32.0 5 30.587966104960724 32.0 32.0 32.0 32.0 32.0 6 34.28117500090989 36.0 36.0 36.0 32.0 36.0 7 34.2082290527073 36.0 36.0 36.0 32.0 36.0 8 34.15078657386494 36.0 36.0 36.0 32.0 36.0 9 34.34539563123944 36.0 36.0 36.0 32.0 36.0 10 33.933789384892385 36.0 36.0 36.0 32.0 36.0 11 34.345939424820536 36.0 36.0 36.0 32.0 36.0 12 34.0842885402996 36.0 36.0 36.0 32.0 36.0 13 34.211926420874825 36.0 36.0 36.0 32.0 36.0 14 34.08069821811261 36.0 36.0 36.0 32.0 36.0 15 33.99758450744933 36.0 36.0 36.0 32.0 36.0 16 34.00004602977163 36.0 36.0 36.0 32.0 36.0 17 33.92223055991471 36.0 36.0 36.0 32.0 36.0 18 33.918917486817286 36.0 36.0 36.0 32.0 36.0 19 33.92606976400643 36.0 36.0 36.0 32.0 36.0 20 33.90320420733522 36.0 36.0 36.0 32.0 36.0 21 33.8852418918022 36.0 36.0 36.0 32.0 36.0 22 33.861826654020966 36.0 36.0 36.0 32.0 36.0 23 33.81034021353532 36.0 36.0 36.0 32.0 36.0 24 33.782814410101714 36.0 36.0 36.0 32.0 36.0 25 33.36114958819411 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 5.0 4 14.0 5 20.0 6 75.0 7 41.0 8 122.0 9 122.0 10 158.0 11 66.0 12 125.0 13 97.0 14 180.0 15 291.0 16 540.0 17 747.0 18 988.0 19 1490.0 20 2285.0 21 3408.0 22 5426.0 23 8434.0 24 12367.0 25 17776.0 26 24448.0 27 31675.0 28 42475.0 29 56734.0 30 73900.0 31 98896.0 32 137834.0 33 190767.0 34 390111.0 35 766738.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.22690071818563 17.388627147984362 11.505748215780166 25.87872391804984 2 16.41730728262859 19.75983993611147 38.54748872476655 25.275364056493387 3 18.893658473923097 24.311895178556135 28.466483257686047 28.327963089834718 4 12.452810596332755 15.9196025839962 36.13408989818918 35.493496921481864 5 14.545899315696165 36.84845539178321 33.51525766308956 15.09038762943106 6 33.3936802729209 35.902182285942786 17.384736363991614 13.319401077144693 7 30.149178620853956 30.4247829776299 20.802186418401465 18.623851983114683 8 28.04010785665944 33.4570886412117 19.211164320777186 19.291639181351677 9 27.95525146285262 14.164890144815315 18.492052909559913 39.38780548277215 10 16.436844890116127 26.658594163376613 31.329595917833984 25.574965028673276 11 36.77599292246197 20.673951275520587 23.33622161433844 19.213834187678998 12 25.47452354836498 23.40011654212655 29.167559299376155 21.95780061013231 13 29.948444718663268 19.750825066599827 25.221276381511228 25.079453833225678 14 23.706277376015905 20.317462697918753 25.0745827383675 30.90167718769784 15 25.07313081284189 28.197431236684622 22.107302798518855 24.622135151954634 16 25.30159522503685 25.64159282555788 24.628348558598702 24.428463390806566 17 23.633642945779528 26.06287687321957 25.527575645106264 24.77590453589464 18 24.302953168823212 24.982751934247375 27.20057464984284 23.513720247086578 19 26.187248351985037 24.400852088146237 25.125298415645254 24.28660114422347 20 25.931510664966844 24.55197497402055 25.222191273046718 24.29432308796589 21 26.988202072055955 23.635600110983866 24.3059490995416 25.070248717418576 22 25.97946184704106 24.66560285226532 24.805141448212435 24.549793852481187 23 24.336550787257533 24.690633207574255 25.617622055317206 25.355193949851003 24 25.121417533297084 25.025804741001817 25.329194576049662 24.52358314965143 25 24.80524774500913 24.862402570306596 25.51349619869524 24.818853485989035 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 156.0 1 156.0 2 452.0 3 748.0 4 748.0 5 748.0 6 1881.5 7 3015.0 8 3015.0 9 3015.0 10 2973.0 11 2931.0 12 2931.0 13 2931.0 14 3285.0 15 3639.0 16 3639.0 17 3639.0 18 6662.5 19 9686.0 20 9686.0 21 9686.0 22 17448.5 23 25211.0 24 25211.0 25 25211.0 26 40824.0 27 56437.0 28 56437.0 29 56437.0 30 73587.0 31 90737.0 32 90737.0 33 90737.0 34 108046.5 35 125356.0 36 125356.0 37 125356.0 38 140644.0 39 155932.0 40 155932.0 41 155932.0 42 179317.5 43 202703.0 44 202703.0 45 202703.0 46 222731.5 47 242760.0 48 242760.0 49 242760.0 50 248510.0 51 254260.0 52 254260.0 53 254260.0 54 233179.0 55 212098.0 56 212098.0 57 212098.0 58 193662.5 59 175227.0 60 175227.0 61 175227.0 62 154563.5 63 133900.0 64 133900.0 65 133900.0 66 109674.0 67 85448.0 68 85448.0 69 85448.0 70 63942.5 71 42437.0 72 42437.0 73 42437.0 74 32267.0 75 22097.0 76 22097.0 77 22097.0 78 17622.5 79 13148.0 80 13148.0 81 13148.0 82 9120.5 83 5093.0 84 5093.0 85 5093.0 86 3894.0 87 2695.0 88 2695.0 89 2695.0 90 1935.0 91 1175.0 92 1175.0 93 1175.0 94 831.0 95 487.0 96 487.0 97 487.0 98 733.5 99 980.0 100 980.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03923235186441984 2 0.00545934500705433 3 0.0019268276495485873 4 0.004656500153075752 5 0.009634138247742936 6 0.014397684381349167 7 0.02467409851227496 8 0.03703790926354506 9 0.050472179820119936 10 0.05951756517494525 11 0.05566390987584807 12 0.06529804812359101 13 0.06604736998730434 14 0.06968693332534057 15 0.06176553076608527 16 0.06872351950056628 17 0.06331769748377719 18 0.07921402559255303 19 0.07562798524478205 20 0.08007039343679685 21 0.07589560019610823 22 0.07969573250494018 23 0.08344234182350686 24 0.0776618588748611 25 0.08012391642706208 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1868356.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.565720789947996 #Duplication Level Percentage of deduplicated Percentage of total 1 70.30377429975648 30.628346016227127 2 15.232169493058434 13.272008863194952 3 5.961220807533969 7.791146438047597 4 2.824901658609169 4.922755076721122 5 1.5202832251519947 3.311611725430672 6 0.9608471188872364 2.5115998381960387 7 0.6167871445181528 1.8809543567435003 8 0.43835056851166704 1.5277646780715408 9 0.31039888550730554 1.217047606157008 >10 1.5773549756721394 12.40779121477567 >50 0.12752865665686364 3.8537626600166712 >100 0.10910489636617506 9.801940061181195 >500 0.01246503747731337 3.643961911647194 >1k 0.004813232293220015 3.229309553589809 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4853 0.2597470717572026 No Hit TATCAACGCAGAGTACTTTTTTTTT 3397 0.1818175979310153 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 2198 0.11764353260299429 No Hit GTCCTAAAGTGTGTATTTCTCATTT 2062 0.11036440592692184 No Hit GTACATGGGGTGGTATCAACGCAAA 1880 0.10062322169864844 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.352299026523853E-5 2 0.0 0.0 0.0 0.0 5.352299026523853E-5 3 0.0 0.0 0.0 0.0 5.352299026523853E-5 4 0.0 0.0 0.0 0.0 5.352299026523853E-5 5 0.0 0.0 0.0 0.0 5.352299026523853E-5 6 0.0 0.0 0.0 0.0 1.6056897079571558E-4 7 0.0 0.0 0.0 0.0 1.6056897079571558E-4 8 0.0 0.0 0.0 0.0 1.6056897079571558E-4 9 0.0 0.0 0.0 5.352299026523853E-5 1.6056897079571558E-4 10 0.0 0.0 0.0 5.352299026523853E-5 1.6056897079571558E-4 11 0.0 0.0 0.0 1.0704598053047706E-4 1.6056897079571558E-4 12 0.0 0.0 0.0 1.6056897079571558E-4 3.2113794159143117E-4 13 0.0 0.0 0.0 1.6056897079571558E-4 4.2818392212190824E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAAATT 95 4.9003575E-9 14.000671 13 TTAGACC 55 1.9654841E-4 13.8140335 3 GTCCAAT 65 5.4731405E-5 13.148842 1 CGCGCTA 90 5.400252E-7 12.667953 16 CCCTTAT 160 0.0 12.464006 1 GCGAAAT 100 1.4411125E-7 12.351253 12 CGGACAT 155 1.8189894E-12 12.25701 5 CGGTGAA 55 0.003065283 12.092783 17 ACCGTAT 55 0.0030671284 12.091812 8 TAATACC 80 2.8711822E-5 11.873343 4 GCGACGG 65 8.0215244E-4 11.692867 11 GTTCTAG 115 7.11334E-8 11.560818 1 TAGAAAT 390 0.0 11.447121 4 GTATAAA 185 0.0 11.292999 1 CTAGGAC 220 0.0 11.223902 3 GTCCTAA 630 0.0 11.154485 1 GAGTTAG 60 0.0058930754 11.079117 1 GTATCAA 3575 0.0 10.89096 1 CGCCCGA 105 3.4626137E-6 10.858245 16 TAGACCT 105 3.4726272E-6 10.855628 4 >>END_MODULE