##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063911_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1868356 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.255632759495512 32.0 32.0 32.0 32.0 32.0 2 31.380312424398777 32.0 32.0 32.0 32.0 32.0 3 31.474612975257394 32.0 32.0 32.0 32.0 32.0 4 31.56249290820379 32.0 32.0 32.0 32.0 32.0 5 31.517520750863326 32.0 32.0 32.0 32.0 32.0 6 35.09210129118862 36.0 36.0 36.0 36.0 36.0 7 35.12079924810903 36.0 36.0 36.0 36.0 36.0 8 35.06804110137468 36.0 36.0 36.0 36.0 36.0 9 35.18042439449441 36.0 36.0 36.0 36.0 36.0 10 35.027687442864206 36.0 36.0 36.0 36.0 36.0 11 35.18022689466033 36.0 36.0 36.0 36.0 36.0 12 35.090898629597355 36.0 36.0 36.0 36.0 36.0 13 35.12758114620554 36.0 36.0 36.0 36.0 36.0 14 35.06543506697867 36.0 36.0 36.0 36.0 36.0 15 35.03931798864885 36.0 36.0 36.0 36.0 36.0 16 35.05326500945216 36.0 36.0 36.0 36.0 36.0 17 35.02072998935963 36.0 36.0 36.0 36.0 36.0 18 35.009717634112555 36.0 36.0 36.0 36.0 36.0 19 35.011902442575185 36.0 36.0 36.0 36.0 36.0 20 35.0041571306539 36.0 36.0 36.0 36.0 36.0 21 34.99484038373843 36.0 36.0 36.0 36.0 36.0 22 34.9727974754276 36.0 36.0 36.0 36.0 36.0 23 34.927916307170584 36.0 36.0 36.0 36.0 36.0 24 34.90646643359189 36.0 36.0 36.0 32.0 36.0 25 34.86699269304137 36.0 36.0 36.0 32.0 36.0 26 34.81990851850504 36.0 36.0 36.0 32.0 36.0 27 34.79714144413592 36.0 36.0 36.0 32.0 36.0 28 34.76726169959044 36.0 36.0 36.0 32.0 36.0 29 34.73864991468435 36.0 36.0 36.0 32.0 36.0 30 34.71793330607229 36.0 36.0 36.0 32.0 36.0 31 34.71050377979357 36.0 36.0 36.0 32.0 36.0 32 34.65683681268452 36.0 36.0 36.0 32.0 36.0 33 34.629363997011275 36.0 36.0 36.0 32.0 36.0 34 34.6090889530689 36.0 36.0 36.0 32.0 36.0 35 34.576116650145906 36.0 36.0 36.0 32.0 36.0 36 34.54409652121972 36.0 36.0 36.0 32.0 36.0 37 34.52077334298174 36.0 36.0 36.0 32.0 36.0 38 34.48236578039731 36.0 36.0 36.0 32.0 36.0 39 34.46937307451042 36.0 36.0 36.0 32.0 36.0 40 34.460280588924164 36.0 36.0 36.0 32.0 36.0 41 34.45087927568408 36.0 36.0 36.0 32.0 36.0 42 34.38489666851499 36.0 36.0 36.0 32.0 36.0 43 34.377137975846146 36.0 36.0 36.0 32.0 36.0 44 34.299849707443336 36.0 36.0 36.0 32.0 36.0 45 34.270434007223464 36.0 36.0 36.0 32.0 36.0 46 34.21791778440512 36.0 36.0 36.0 32.0 36.0 47 34.18887085758817 36.0 36.0 36.0 32.0 36.0 48 34.13094024907459 36.0 36.0 36.0 32.0 36.0 49 34.107282016917544 36.0 36.0 36.0 32.0 36.0 50 33.52501129335094 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 6.0 20 22.0 21 76.0 22 217.0 23 686.0 24 1618.0 25 3868.0 26 7559.0 27 13889.0 28 22491.0 29 33484.0 30 47880.0 31 67042.0 32 97178.0 33 156251.0 34 325337.0 35 1090751.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.224726913798065 18.28370132904539 12.051763665550967 26.439808091605588 2 15.61471182815612 20.503578831983564 38.06787497183339 25.81383436802692 3 18.09255123106015 24.81062157016703 28.864949749752324 28.231877449020498 4 12.083510851251047 16.567934590624056 36.28810569291934 35.060448865205565 5 14.156723879175063 37.24054730468926 33.23386977642377 15.368859039711918 6 33.430531291748025 36.25772873634091 17.08098902134073 13.230750950570341 7 29.995418422224507 30.575501832631108 20.830121947042098 18.598957798102283 8 27.838377696755867 33.710331435764914 19.104549668264507 19.346741199214712 9 27.84548809501508 13.953332780256217 18.431758758466763 39.76942036626194 10 16.28184178567166 26.871301193198878 31.313321618828276 25.53353540230119 11 37.0015136301647 20.600945430100044 23.217416809216232 19.180124130519022 12 25.288783603107333 23.429767592222888 29.294876666841507 21.98657213782827 13 29.935274128223917 19.737831584277174 25.25636380082651 25.0705304866724 14 23.63896096667009 20.238852207721028 25.116519799266946 31.005667026341932 15 25.03348002813286 28.263031518863897 22.09232244880045 24.6111660042028 16 25.406870786712304 25.659661358046826 24.55879401288306 24.374673842357808 17 23.660158984690284 26.2079068443059 25.441297054736893 24.690637116266924 18 24.319907940161105 24.943773918163085 27.209355848743545 23.526962292932264 19 26.218718488339483 24.301096793116514 25.22303030043525 24.257154418108755 20 26.03618609440884 24.42443621135745 25.2656633528551 24.273714341378614 21 26.96209930013338 23.594165137693246 24.422754549989403 25.020981012183974 22 25.89837145336026 24.576083855673954 24.973706788813463 24.551837902152325 23 24.35010525380538 24.59422557231255 25.761303744873125 25.29436542900895 24 25.26370890219595 24.907190737485735 25.33751742180793 24.491582938510383 25 24.821832199250345 24.777728476285954 25.599106792562097 24.801332531901604 26 24.34479141018916 25.55934398852408 26.073833406485182 24.02203119480158 27 25.12842362641451 25.004884299639606 25.123980920988892 24.742711152956996 28 24.166116694687137 25.066732609778956 25.699187004924855 25.067963690609048 29 24.61045050291386 24.597979352485027 25.312635148733186 25.47893499586793 30 24.024411719209564 25.170597816283724 26.08063125340219 24.724359211104527 31 25.4426926934964 24.497839126529662 25.00125787779423 25.058210302179717 32 24.756033331049604 25.179790267881614 24.808006046177034 25.25617035489175 33 24.193226371920623 24.91571101684709 25.668865664851264 25.222196946381022 34 24.974321507042518 24.913142731742045 25.78993146157325 24.322604299642187 35 25.31947475272989 24.943946398358722 25.570826114207506 24.165752734703883 36 24.22493068268191 25.378220980398453 25.420935435869435 24.975912901050197 37 25.230987613218993 25.08898549576563 24.809637945449346 24.87038894556603 38 24.755315350807 25.3619352314314 25.197554250808658 24.685195166952948 39 25.587706339520842 24.60883807566318 24.820369537756655 24.983086047059327 40 25.85666763902233 24.905810850953934 25.26094368454998 23.976577825473754 41 24.8582532648717 24.897700954398577 25.90332265159126 24.34072312913846 42 25.664191898295957 25.735806924177457 25.064670295232677 23.535330882293906 43 24.610934720102083 24.92715396258893 25.554240056863797 24.90767126044519 44 24.270603738319757 25.544043170196208 24.915030888613657 25.270322202870375 45 24.53240402005424 25.601913577504654 25.04660571750325 24.81907668493786 46 24.66793981382364 24.93678867184489 25.07043700918892 25.324834505142547 47 25.26746010846131 24.92806356098219 25.163997953237033 24.640478377319468 48 25.283329711537327 25.469968174582704 24.356292665381375 24.890409448498595 49 24.895349005246867 25.517394196921035 24.699775684787618 24.887481113044483 50 24.723430516015043 26.082981817520075 24.29465348060869 24.89893418585619 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 37.0 1 31.5 2 26.0 3 87.0 4 148.0 5 178.5 6 209.0 7 205.0 8 201.0 9 301.5 10 402.0 11 611.0 12 820.0 13 1573.0 14 2326.0 15 3297.5 16 4269.0 17 4866.0 18 5463.0 19 5587.0 20 5711.0 21 6161.5 22 6612.0 23 7293.5 24 7975.0 25 8871.0 26 9767.0 27 12834.0 28 15901.0 29 19937.5 30 23974.0 31 29196.0 32 34418.0 33 41854.0 34 49290.0 35 57807.0 36 66324.0 37 73038.0 38 79752.0 39 82400.0 40 85048.0 41 90314.5 42 95581.0 43 96599.0 44 97617.0 45 106329.5 46 115042.0 47 122584.5 48 130127.0 49 135513.5 50 140900.0 51 138399.5 52 135899.0 53 134227.0 54 132555.0 55 132261.0 56 131967.0 57 128907.5 58 125848.0 59 114889.0 60 103930.0 61 91250.0 62 78570.0 63 67332.5 64 56095.0 65 48145.5 66 40196.0 67 34150.5 68 28105.0 69 25162.5 70 22220.0 71 17410.0 72 12600.0 73 10609.5 74 8619.0 75 6658.5 76 4698.0 77 4143.0 78 3588.0 79 3003.0 80 2418.0 81 1891.5 82 1365.0 83 1141.5 84 918.0 85 662.0 86 406.0 87 276.5 88 147.0 89 107.5 90 68.0 91 69.0 92 70.0 93 58.0 94 46.0 95 46.0 96 46.0 97 32.5 98 19.0 99 21.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009259477315886265 2 4.8170691238714683E-4 3 3.746609318566697E-4 4 0.0 5 0.0 6 2.1409196106095412E-4 7 2.1409196106095412E-4 8 0.0 9 0.0011239827955700091 10 9.098908345090551E-4 11 0.0 12 1.0704598053047706E-4 13 8.02844853978578E-4 14 2.1409196106095412E-4 15 0.004174793240688606 16 5.887528929176239E-4 17 0.0 18 3.2113794159143117E-4 19 0.0 20 7.493218637133394E-4 21 0.0 22 1.6056897079571558E-4 23 8.02844853978578E-4 24 4.2818392212190824E-4 25 0.0017662586787528713 26 0.005138207065462899 27 0.006690373783154816 28 0.004228316230953844 29 0.0023550115716704954 30 0.003907178289362413 31 0.006957988734481009 32 0.0036395633380362203 33 0.004335362211484321 34 0.00326490240617955 35 0.002943764464588119 36 0.0072791266760724406 37 0.003960701279627651 38 0.007225603685807202 39 0.004067747260158129 40 0.0021944426008747796 41 0.0031578564256490734 42 0.0017662586787528713 43 0.001712735688487633 44 0.001605689707957156 45 0.001231028776100486 46 0.0010704598053047705 47 0.002140919610609541 48 0.0020338736300790643 49 1.6056897079571558E-4 50 0.0010169368150395321 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1868356.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.3055777416611 #Duplication Level Percentage of deduplicated Percentage of total 1 71.08818560543511 33.62867690671544 2 15.188254029740145 14.369782635279396 3 5.829656851444252 8.2732585617961 4 2.647090723090465 5.008886239615435 5 1.4589915666165194 3.4509219489502843 6 0.8887757332298657 2.5226429725924353 7 0.5982519246293484 1.9810457050756414 8 0.4045330540944209 1.530933587162818 9 0.28381923745949583 1.2083609701997238 >10 1.4113735456076364 11.73741542758194 >50 0.10373796351358978 3.4218984152680725 >100 0.08549166504925874 8.222793551254343 >500 0.009333886609391504 3.088929647566919 >1k 0.0025042134805684526 1.5544534309415465 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.352299026523853E-5 2 0.0 0.0 0.0 0.0 5.352299026523853E-5 3 0.0 0.0 0.0 0.0 5.352299026523853E-5 4 0.0 0.0 0.0 0.0 1.0704598053047706E-4 5 0.0 0.0 0.0 0.0 1.0704598053047706E-4 6 0.0 0.0 0.0 0.0 1.6056897079571558E-4 7 0.0 0.0 0.0 0.0 1.6056897079571558E-4 8 0.0 0.0 0.0 0.0 1.6056897079571558E-4 9 0.0 0.0 0.0 0.0 1.6056897079571558E-4 10 0.0 0.0 0.0 0.0 1.6056897079571558E-4 11 0.0 0.0 0.0 5.352299026523853E-5 1.6056897079571558E-4 12 0.0 0.0 0.0 1.0704598053047706E-4 3.2113794159143117E-4 13 0.0 0.0 0.0 1.6056897079571558E-4 4.2818392212190824E-4 14 0.0 0.0 0.0 1.6056897079571558E-4 4.817069123871468E-4 15 0.0 0.0 0.0 2.6761495132619263E-4 6.422758831828623E-4 16 0.0 0.0 0.0 3.2113794159143117E-4 6.422758831828623E-4 17 0.0 0.0 0.0 3.746609318566697E-4 6.422758831828623E-4 18 0.0 0.0 0.0 3.746609318566697E-4 8.02844853978578E-4 19 0.0 0.0 0.0 5.352299026523853E-4 8.02844853978578E-4 20 0.0 0.0 0.0 8.02844853978578E-4 8.02844853978578E-4 21 0.0 0.0 0.0 0.0010704598053047705 8.02844853978578E-4 22 0.0 0.0 0.0 0.001605689707957156 8.02844853978578E-4 23 0.0 0.0 0.0 0.0028902414743228804 0.0010169368150395321 24 0.0 0.0 0.0 0.004388885201749559 0.0010704598053047705 25 0.0 0.0 0.0 0.005245253045993376 0.0010704598053047705 26 0.0 0.0 0.0 0.006155143880502431 0.0011239827955700091 27 0.0 0.0 0.0 0.006850942753950532 0.0011775057858352477 28 0.0 0.0 0.0 0.009045385354825311 0.0011775057858352477 29 0.0 0.0 0.0 0.01273847168312677 0.0011775057858352477 30 0.0 0.0 0.0 0.019000661544159678 0.0011775057858352477 31 0.0 0.0 0.0 0.035539265536118386 0.0011775057858352477 32 0.0 0.0 0.0 0.05325537531391234 0.0011775057858352477 33 0.0 0.0 0.0 0.06808124361738341 0.0011775057858352477 34 0.0 0.0 0.0 0.08606496834650355 0.0012310287761004863 35 0.0 0.0 0.0 0.10581495175437658 0.0012310287761004863 36 0.0 0.0 0.0 0.13455679752680966 0.0012310287761004863 37 0.0 0.0 0.0 0.17812451160271384 0.0012310287761004863 38 0.0 0.0 0.0 0.24063936423251242 0.0012310287761004863 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATCGC 30 0.0057461634 29.33296 6 GTATCAA 4110 0.0 19.96782 1 TGTAGGA 1560 0.0 19.884361 2 TTGTCGG 135 2.6011548E-9 19.554783 22 CTGTAGG 1585 0.0 18.878752 1 GTAGGAC 1550 0.0 18.593311 3 TCGCATT 60 0.0074152676 18.33261 18 CGGTACG 85 1.4312087E-4 18.1179 38 GTCCTAG 390 0.0 18.052984 1 TACCGTC 485 0.0 17.690496 7 GTCCTAA 955 0.0 17.279116 1 AACGCAG 4915 0.0 17.008938 6 TAGGACG 1295 0.0 16.9882 4 GTCCTAC 1360 0.0 16.339775 1 CCGTCGT 490 0.0 16.163492 9 ACCGTCG 490 0.0 16.16306 8 TCCTACA 1430 0.0 16.153639 2 CGTCGTA 525 0.0 15.923607 10 CGAAATT 180 5.2714313E-9 15.888685 13 GCGAAAT 180 5.2714313E-9 15.888685 12 >>END_MODULE