##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063908_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5000202 Sequences flagged as poor quality 0 Sequence length 50 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.425959191248673 32.0 32.0 32.0 32.0 32.0 2 31.526287737975387 32.0 32.0 32.0 32.0 32.0 3 31.575248359966256 32.0 32.0 32.0 32.0 32.0 4 31.639180777096605 32.0 32.0 32.0 32.0 32.0 5 31.618950594395987 32.0 32.0 32.0 32.0 32.0 6 35.240336690397704 36.0 36.0 36.0 36.0 36.0 7 35.25791058041255 36.0 36.0 36.0 36.0 36.0 8 35.20044170215523 36.0 36.0 36.0 36.0 36.0 9 35.295561259325126 36.0 36.0 36.0 36.0 36.0 10 35.18587649058978 36.0 36.0 36.0 36.0 36.0 11 35.291756813024755 36.0 36.0 36.0 36.0 36.0 12 35.21939613639609 36.0 36.0 36.0 36.0 36.0 13 35.24465031612723 36.0 36.0 36.0 36.0 36.0 14 35.1986231756237 36.0 36.0 36.0 36.0 36.0 15 35.173104206590054 36.0 36.0 36.0 36.0 36.0 16 35.19438074701782 36.0 36.0 36.0 36.0 36.0 17 35.19423555288366 36.0 36.0 36.0 36.0 36.0 18 35.18767541791312 36.0 36.0 36.0 36.0 36.0 19 35.14293082559465 36.0 36.0 36.0 36.0 36.0 20 35.12687787413388 36.0 36.0 36.0 36.0 36.0 21 35.09923579087405 36.0 36.0 36.0 36.0 36.0 22 35.05124132985027 36.0 36.0 36.0 36.0 36.0 23 35.05110693527981 36.0 36.0 36.0 36.0 36.0 24 35.01822566368319 36.0 36.0 36.0 36.0 36.0 25 34.955558395440825 36.0 36.0 36.0 36.0 36.0 26 34.929083065044175 36.0 36.0 36.0 36.0 36.0 27 34.859165889698055 36.0 36.0 36.0 36.0 36.0 28 34.785846451803344 36.0 36.0 36.0 32.0 36.0 29 34.74667763422358 36.0 36.0 36.0 32.0 36.0 30 34.67512492495303 36.0 36.0 36.0 32.0 36.0 31 34.68307700368905 36.0 36.0 36.0 32.0 36.0 32 34.64015753763548 36.0 36.0 36.0 32.0 36.0 33 34.69932774715902 36.0 36.0 36.0 32.0 36.0 34 34.67778841734794 36.0 36.0 36.0 32.0 36.0 35 34.651061097131674 36.0 36.0 36.0 32.0 36.0 36 34.57066594509582 36.0 36.0 36.0 32.0 36.0 37 34.45150855905421 36.0 36.0 36.0 32.0 36.0 38 34.384985046604115 36.0 36.0 36.0 32.0 36.0 39 34.17238523563648 36.0 36.0 36.0 32.0 36.0 40 34.30380572624866 36.0 36.0 36.0 32.0 36.0 41 34.30274616905477 36.0 36.0 36.0 32.0 36.0 42 34.27680261717427 36.0 36.0 36.0 32.0 36.0 43 34.30216999233231 36.0 36.0 36.0 32.0 36.0 44 34.139602560056574 36.0 36.0 36.0 32.0 36.0 45 34.11750365285243 36.0 36.0 36.0 32.0 36.0 46 33.92241393447705 36.0 36.0 36.0 32.0 36.0 47 33.97671074088607 36.0 36.0 36.0 32.0 36.0 48 33.915611609290984 36.0 36.0 36.0 32.0 36.0 49 33.87214976514949 36.0 36.0 36.0 32.0 36.0 50 33.42935385410429 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 1.0 18 3.0 19 9.0 20 47.0 21 128.0 22 380.0 23 1203.0 24 3039.0 25 7523.0 26 15970.0 27 30985.0 28 54427.0 29 85867.0 30 127092.0 31 183439.0 32 266205.0 33 433017.0 34 895106.0 35 2895760.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.6426414173537 20.777320420661873 13.437798765535808 26.142239396448613 2 11.448277020648872 20.563456166342945 47.493408232030234 20.494858580977947 3 18.711512704819757 26.227208611514484 29.993746236392266 25.067532447273493 4 10.328622723641963 17.860158449598636 39.94742612398459 31.863792702774806 5 10.613371219802719 40.94350588236235 35.97472662104451 12.468396276790418 6 30.633020451639197 39.549288766457884 18.222282131104723 11.595408650798191 7 27.68792909559363 31.290507154018133 22.224384359256245 18.79717939113199 8 22.930302787888486 43.71521139154434 19.025118995240188 14.329366825326986 9 26.570606651256423 14.385142970054027 20.757067104947904 38.28718327374164 10 16.436517042578497 28.9069354477753 33.43859677893856 21.217950730707642 11 34.627467975787376 19.448798158314034 29.262663640921634 16.661070224976957 12 27.517892305778535 22.801815289566765 33.10471553703716 16.575576867617535 13 31.062100401645782 22.828891857228253 26.003939460543098 20.105068280582866 14 19.01496123446534 26.598874562541535 25.86516229686518 28.521001906127946 15 20.05680853400022 40.50000070000658 21.082318173790835 18.36087259220237 16 18.963860742000552 27.243199114907966 34.48921014095955 19.303730002131932 17 18.772321598207434 32.315994433824876 29.88719255742068 19.024491410547014 18 19.257862865364274 26.287528391472232 37.67437618758201 16.780232555581488 19 25.853611026281154 24.16065840579545 26.52894414802291 23.45678641990049 20 25.550846601723503 28.286455232395234 28.437070201855256 17.725627964026003 21 22.707622612046475 25.87305472858896 25.466931135982108 25.952391523382456 22 24.336925462062258 32.278140519404054 26.09067811796027 17.294255900573418 23 18.848280624676136 32.07671996030526 29.56383986989214 19.511159545126468 24 25.117810735251382 26.682034110365205 30.24862499977501 17.951530154608403 25 21.303508015452515 29.878770230627755 30.14168539298877 18.676036360930958 26 16.88117009872158 32.60766172258756 31.80026880430087 18.710899374389992 27 19.36340408510213 30.736128403210078 29.813405335133382 20.08706217655441 28 17.933650760190456 31.963899178339506 27.408136444881865 22.69431361658817 29 21.00995224474498 27.397652596619494 26.755122620087125 24.8372725385484 30 18.04652556277955 28.772536981970415 30.223375821299342 22.957561633950693 31 24.14724861874917 26.084219899292293 28.239039196642434 21.5294922853161 32 20.029663827949797 30.912440707843896 28.40717523838362 20.650720225822692 33 17.760539844858602 31.540523864714782 32.01910817197355 18.679828118453067 34 20.361988235322354 30.68086091904644 31.303194446777756 17.653956398853452 35 19.029511569809756 31.717272605273678 30.647280951208582 18.605934873707987 36 17.237255700423457 30.19356358769264 32.3559883547435 20.2131923571404 37 19.104084716732224 29.88645609083513 26.989438408449274 24.020020783983373 38 20.54759423232583 32.69156727763147 26.93979375562648 19.82104473441622 39 23.908825198830876 26.78417785038254 28.27842442506747 21.028572525719113 40 25.80106654208209 26.945047323204967 29.721340681476548 17.532545453236388 41 23.91690433238267 25.4627981488074 32.197271210915154 18.42302630789477 42 21.77201585087664 31.89102942299977 29.98464831317441 16.352306412949176 43 18.09588550969589 31.914464264679033 31.169940495297205 18.81970973032788 44 17.326859105547793 31.740995689514662 29.39625805953562 21.535887145401933 45 18.129052270451425 32.175309877005176 28.727118840333922 20.968519012209484 46 19.71516488685553 27.036276468174194 29.774011050855215 23.474547594115062 47 24.17234840795579 27.16677989816565 28.70129503902037 19.95957665485819 48 19.3569838314975 29.443718235584466 27.806548359510185 23.39274957340785 49 22.635597955756044 27.812805363640475 28.18799140671967 21.363605273883813 50 19.343144815492725 33.347186312030416 26.40724397455425 20.902424897922614 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 8.5 2 14.0 3 36.0 4 58.0 5 97.5 6 137.0 7 154.0 8 171.0 9 245.0 10 319.0 11 522.5 12 726.0 13 1417.5 14 2109.0 15 3138.5 16 4168.0 17 4792.0 18 5416.0 19 6344.0 20 7272.0 21 9244.0 22 11216.0 23 14871.5 24 18527.0 25 29815.0 26 41103.0 27 73043.5 28 104984.0 29 144099.5 30 183215.0 31 236028.0 32 288841.0 33 377507.0 34 466173.0 35 561557.0 36 656941.0 37 642357.0 38 627773.0 39 550840.0 40 473907.0 41 404025.0 42 334143.0 43 285382.0 44 236621.0 45 225047.0 46 213473.0 47 212228.5 48 210984.0 49 205440.5 50 199897.0 51 175013.0 52 150129.0 53 139736.5 54 129344.0 55 131388.5 56 133433.0 57 128109.5 58 122786.0 59 110096.5 60 97407.0 61 85004.0 62 72601.0 63 63010.0 64 53419.0 65 46495.0 66 39571.0 67 35803.5 68 32036.0 69 32187.0 70 32338.0 71 23884.5 72 15431.0 73 13963.5 74 12496.0 75 9332.0 76 6168.0 77 5731.5 78 5295.0 79 4475.5 80 3656.0 81 3005.5 82 2355.0 83 2084.5 84 1814.0 85 1301.5 86 789.0 87 584.5 88 380.0 89 294.5 90 209.0 91 172.5 92 136.0 93 106.0 94 76.0 95 73.0 96 70.0 97 48.5 98 27.0 99 36.0 100 45.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.00923962671908055 2 5.199789928486889E-4 3 2.5998949642434447E-4 4 0.0 5 0.0 6 3.1998707252227013E-4 7 9.999596016320942E-5 8 3.9998384065283766E-5 9 0.0012799482900890805 10 9.799604095994522E-4 11 1.9999192032641883E-5 12 1.5999353626113506E-4 13 4.999798008160469E-4 14 2.5998949642434447E-4 15 0.004979798816127828 16 8.799644494362428E-4 17 0.0 18 4.199830326854795E-4 19 5.999757609792564E-5 20 6.999717211424658E-4 21 0.0 22 1.9999192032641884E-4 23 8.599652574036009E-4 24 4.199830326854795E-4 25 0.002199911123590607 26 0.005639772153205011 27 0.006539735794673895 28 0.004099834366691586 29 0.0024798998120475935 30 0.003959840022463092 31 0.007719688124599767 32 0.0034598602216470453 33 0.004939800432062545 34 0.002999878804896282 35 0.0032598683013206264 36 0.007959678428991469 37 0.003959840022463092 38 0.008099672773219962 39 0.004479819015311782 40 0.0023599046598517417 41 0.003639852949940823 42 0.0019999192032641878 43 0.001859924859035695 44 0.0013799442502522897 45 0.0014599410183828575 46 9.199628335015266E-4 47 0.0024199022359496676 48 0.002199911123590607 49 3.1998707252227013E-4 50 0.0014799402104154994 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5000202.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.47432509597016 #Duplication Level Percentage of deduplicated Percentage of total 1 75.6355738869814 32.1256995409592 2 13.830724274768619 11.749013583184968 3 4.53920538144878 5.783990551470981 4 2.023857350865877 3.4384790027418477 5 1.028275322096282 2.1837650159440454 6 0.6080008738534721 1.5494656064811794 7 0.4027119163271488 1.1973441797870317 8 0.2892284510499794 0.9827826605520574 9 0.2031462231712104 0.7765648852493248 >10 1.178013862786846 9.474213289963984 >50 0.12471201076770043 3.7279796504804277 >100 0.10735797312258878 9.501188983981573 >500 0.01647120040574831 4.818007367314274 >1k 0.012056728276117512 9.756983227303403 >5k 4.272069074214836E-4 1.1611395126417121 >10k+ 2.373371707897131E-4 1.7733829419442344 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 24807 0.49611995675374715 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 17654 0.35306573614425973 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 17333 0.3466459955017817 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 17060 0.3411862160768705 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 11105 0.2220910275224881 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 8984 0.17967274122125465 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 7584 0.15167387237555605 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 6934 0.1386743975543388 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 6404 0.1280748257770386 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 6287 0.1257349203092195 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 5718 0.11435538004264628 No Hit TTGTAGAACAGTGTATATCAATGAGTTACAATGAAAAACATGGAAAATGA 5368 0.10735566283122161 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 5197 0.10393580099363985 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 5116 0.10231586643899586 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.9997576097925646E-5 2 0.0 0.0 0.0 0.0 5.9997576097925646E-5 3 0.0 0.0 0.0 0.0 5.9997576097925646E-5 4 0.0 0.0 0.0 0.0 5.9997576097925646E-5 5 0.0 0.0 0.0 0.0 7.999676813056752E-5 6 0.0 0.0 0.0 0.0 7.999676813056752E-5 7 0.0 0.0 0.0 0.0 7.999676813056752E-5 8 0.0 0.0 0.0 0.0 7.999676813056752E-5 9 0.0 0.0 0.0 0.0 7.999676813056752E-5 10 0.0 0.0 0.0 0.0 7.999676813056752E-5 11 0.0 0.0 0.0 0.0 7.999676813056752E-5 12 0.0 0.0 0.0 0.0 9.99959601632094E-5 13 0.0 0.0 0.0 0.0 9.99959601632094E-5 14 0.0 0.0 0.0 0.0 9.99959601632094E-5 15 0.0 0.0 0.0 1.999919203264188E-5 9.99959601632094E-5 16 0.0 0.0 0.0 1.999919203264188E-5 9.99959601632094E-5 17 0.0 0.0 0.0 1.999919203264188E-5 9.99959601632094E-5 18 0.0 0.0 0.0 3.999838406528376E-5 9.99959601632094E-5 19 0.0 0.0 0.0 3.999838406528376E-5 9.99959601632094E-5 20 0.0 0.0 0.0 7.999676813056752E-5 1.1999515219585129E-4 21 0.0 0.0 0.0 1.5999353626113504E-4 1.1999515219585129E-4 22 0.0 0.0 0.0 2.9998788048962824E-4 1.1999515219585129E-4 23 0.0 0.0 0.0 3.7998464862019573E-4 1.3999434422849318E-4 24 0.0 0.0 0.0 5.599773769139727E-4 1.3999434422849318E-4 25 0.0 0.0 0.0 6.999717211424658E-4 1.3999434422849318E-4 26 0.0 0.0 0.0 7.999676813056752E-4 1.5999353626113504E-4 27 0.0 0.0 0.0 0.001019958793664736 1.7999272829377692E-4 28 0.0 0.0 0.0 0.001519938594480783 1.7999272829377692E-4 29 0.0 0.0 0.0 0.002639893348308728 1.7999272829377692E-4 30 0.0 0.0 0.0 0.004879802855964619 1.7999272829377692E-4 31 0.0 0.0 0.0 0.013699446542359689 1.7999272829377692E-4 32 0.0 0.0 0.0 0.0242590199355946 1.7999272829377692E-4 33 0.0 0.0 0.0 0.03469859817663366 1.7999272829377692E-4 34 0.0 0.0 0.0 0.04697810208467578 1.7999272829377692E-4 35 0.0 0.0 0.0 0.06181750257289605 1.7999272829377692E-4 36 0.0 0.0 0.0 0.08123671803659133 1.7999272829377692E-4 37 0.0 0.0 0.0 0.11639529762997575 1.7999272829377692E-4 38 0.0 0.0 0.0 0.16119348778309356 1.7999272829377692E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8170 0.0 29.434362 1 GGTATCA 2860 0.0 28.694546 1 TAGGACC 9750 0.0 26.03736 4 CTAGGAC 1495 0.0 22.954868 3 TGTAGGA 27740 0.0 22.934639 2 CTGTAGG 26870 0.0 22.714088 1 AGGACCT 16700 0.0 22.406994 5 GGACCTG 16485 0.0 21.951927 6 GTAGGAC 28565 0.0 21.755827 3 TTAGGAC 16415 0.0 21.28144 3 TAGGACA 6515 0.0 21.103834 4 ACTGTTC 5615 0.0 20.882261 8 GTCCTAC 24960 0.0 20.838161 1 CTTTAGG 16915 0.0 20.616446 1 GATATAC 6330 0.0 20.29858 1 TAGGACG 31130 0.0 20.246094 4 TCCTACA 26150 0.0 20.24063 2 TTTAGGA 17695 0.0 20.189964 2 GGACATG 6540 0.0 20.148598 6 AGGACGT 30995 0.0 20.092964 5 >>END_MODULE