##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063907_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2229912 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32161672747624 32.0 32.0 32.0 32.0 32.0 2 31.377132371142896 32.0 32.0 32.0 32.0 32.0 3 31.465501777648626 32.0 32.0 32.0 32.0 32.0 4 31.558536390673712 32.0 32.0 32.0 32.0 32.0 5 31.5034001341757 32.0 32.0 32.0 32.0 32.0 6 35.0828647049749 36.0 36.0 36.0 36.0 36.0 7 35.102834551318615 36.0 36.0 36.0 36.0 36.0 8 35.04393267537015 36.0 36.0 36.0 36.0 36.0 9 35.1594614495998 36.0 36.0 36.0 36.0 36.0 10 35.007159923799684 36.0 36.0 36.0 36.0 36.0 11 35.159510330452505 36.0 36.0 36.0 36.0 36.0 12 35.067400866043144 36.0 36.0 36.0 36.0 36.0 13 35.104699198892156 36.0 36.0 36.0 36.0 36.0 14 35.04816243869713 36.0 36.0 36.0 36.0 36.0 15 35.013475419657816 36.0 36.0 36.0 36.0 36.0 16 35.0317752449424 36.0 36.0 36.0 36.0 36.0 17 35.0014538690316 36.0 36.0 36.0 36.0 36.0 18 34.995199810575485 36.0 36.0 36.0 36.0 36.0 19 34.99266249071712 36.0 36.0 36.0 36.0 36.0 20 34.98102167260412 36.0 36.0 36.0 36.0 36.0 21 34.98434646748392 36.0 36.0 36.0 36.0 36.0 22 34.96065808874969 36.0 36.0 36.0 36.0 36.0 23 34.91017044618801 36.0 36.0 36.0 32.0 36.0 24 34.88384653744183 36.0 36.0 36.0 32.0 36.0 25 34.85649613078902 36.0 36.0 36.0 32.0 36.0 26 34.796635472610575 36.0 36.0 36.0 32.0 36.0 27 34.78636511216586 36.0 36.0 36.0 32.0 36.0 28 34.7618004656686 36.0 36.0 36.0 32.0 36.0 29 34.73908432261004 36.0 36.0 36.0 32.0 36.0 30 34.71543092283462 36.0 36.0 36.0 32.0 36.0 31 34.71171328734049 36.0 36.0 36.0 32.0 36.0 32 34.668323682728285 36.0 36.0 36.0 32.0 36.0 33 34.65074451368484 36.0 36.0 36.0 32.0 36.0 34 34.636364125579846 36.0 36.0 36.0 32.0 36.0 35 34.610261750239474 36.0 36.0 36.0 32.0 36.0 36 34.588042487775304 36.0 36.0 36.0 32.0 36.0 37 34.56798564248275 36.0 36.0 36.0 32.0 36.0 38 34.52611672568245 36.0 36.0 36.0 32.0 36.0 39 34.523593756166164 36.0 36.0 36.0 32.0 36.0 40 34.51136726471717 36.0 36.0 36.0 32.0 36.0 41 34.49302663064731 36.0 36.0 36.0 32.0 36.0 42 34.43057752951686 36.0 36.0 36.0 32.0 36.0 43 34.426274220686736 36.0 36.0 36.0 32.0 36.0 44 34.36382108352258 36.0 36.0 36.0 32.0 36.0 45 34.333834698409625 36.0 36.0 36.0 32.0 36.0 46 34.30926870656779 36.0 36.0 36.0 32.0 36.0 47 34.28996794492339 36.0 36.0 36.0 32.0 36.0 48 34.244889932876276 36.0 36.0 36.0 32.0 36.0 49 34.23386662792074 36.0 36.0 36.0 32.0 36.0 50 33.62475873487384 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 3.0 18 2.0 19 5.0 20 24.0 21 71.0 22 222.0 23 698.0 24 1784.0 25 4103.0 26 8334.0 27 15298.0 28 24932.0 29 38680.0 30 55940.0 31 79872.0 32 117151.0 33 189712.0 34 396844.0 35 1296237.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.95449652871213 18.41042821520191 12.374333997093807 26.26074125899216 2 15.83213783930318 20.55795302123278 37.24685535366817 26.36305378579587 3 17.90999261852293 24.79830988391439 28.855252194487125 28.43644530307556 4 12.478878090256476 16.51029278285421 35.90531823677347 35.105510890115845 5 14.513083924388049 36.945807726941695 33.119602926034744 15.421505422635512 6 33.93611019677098 35.690492227909566 16.986890006825412 13.386507568494041 7 30.179079056589302 30.385589725858768 20.96767177494687 18.467659442605058 8 28.088642063005175 33.18897786100976 19.208291627651676 19.514088448333386 9 27.64989358181285 14.162049830439457 18.427880937197575 39.76017565055012 10 16.299257408315107 26.711416197996947 31.166697236145414 25.822629157542536 11 36.95338650135073 20.885667237092765 22.93216055162715 19.22878570992936 12 25.179547685578203 23.324673787136604 28.828889430017103 22.666889097268093 13 29.675421295785565 19.655761274242053 25.202228255361437 25.46658917461095 14 23.891141599690748 19.672622971551267 24.961904223765487 31.474331204992495 15 25.16804137396583 27.596277347646076 21.901616641432806 25.33406463695529 16 25.78149454637754 25.603728248966096 23.79090665296198 24.823870551694384 17 24.199385446600584 26.001833256200246 25.037266044579336 24.761515252619834 18 24.881508405066583 24.859624064702306 26.23327002719847 24.02559750303264 19 26.013280350650763 24.51541787990642 25.084812801945905 24.38648896749691 20 26.218440288802185 24.287546526750077 24.64258486927665 24.851428315171084 21 27.02550593924783 24.000588364025127 24.059245387261917 24.914660309465127 22 26.239680632707437 24.33027536101249 24.535261304385067 24.89478270189501 23 24.760156653256455 24.24775538557231 25.19708344750174 25.79500451366949 24 25.402506477863152 24.671846565454448 24.964325786514387 24.961321170168016 25 25.149593721256768 24.326676900433345 25.22399257715574 25.29973680115415 26 24.877263841369317 25.127243323677682 25.335514711521256 24.659978123431742 27 25.410710217436932 24.917929711955715 24.56955703571089 25.101803034896463 28 24.843889864546092 24.588400223155425 25.225980744772265 25.34172916752622 29 25.079792326931262 24.54060831867241 24.93682313302548 25.442776221370845 30 24.750036662037008 24.705190133584352 25.375286961723937 25.1694862426547 31 25.71039290468178 24.31938619182761 24.486131193065415 25.484089710425195 32 25.17297081067118 24.826177116369845 24.29578412238279 25.705067950576183 33 24.737377433833103 24.530813304774924 25.064938093546736 25.66687116784524 34 25.428963639274553 24.45118530341265 25.258010512810046 24.86184054450275 35 25.783785553384508 24.477196009957616 25.094995136446336 24.64402330021154 36 24.85696923218366 24.906256937390264 24.859525555383637 25.377248275042437 37 25.80381291760265 24.544889075050644 24.543050378928363 25.10824762841835 38 25.193350838993524 24.694686187495936 24.89331787573074 25.218645097779802 39 25.75078482375101 24.35429186474123 24.4563637994439 25.43855951206386 40 26.08361646174986 24.453191428294662 24.84281439811144 24.620377711844036 41 25.03005843961606 24.747031490840303 25.3413835986085 24.881526470935135 42 26.011483185783558 25.09438895289364 24.750960706660347 24.14316715466245 43 25.24928505025165 24.353092121224623 25.064566341551576 25.33305648697215 44 24.905297721898414 24.87009408116928 24.689053192476916 25.53555500445539 45 24.98904648103909 25.09456799635137 24.651673612490736 25.26471191011881 46 24.974841830904815 24.65675467690812 24.85196592480712 25.516437567379946 47 25.480601705666857 24.540229189173676 25.00873372824584 24.970435376913628 48 25.757128660299784 25.095610869144057 24.215784583150963 24.931475887405195 49 25.27833011795116 25.04500189694095 24.48816228128002 25.188505703827875 50 25.208105928855172 25.381613490268958 24.234059861678283 25.17622071919759 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 29.5 2 29.0 3 105.0 4 181.0 5 222.5 6 264.0 7 253.5 8 243.0 9 334.0 10 425.0 11 600.0 12 775.0 13 1514.5 14 2254.0 15 2982.5 16 3711.0 17 3804.5 18 3898.0 19 3898.5 20 3899.0 21 4411.5 22 4924.0 23 5847.0 24 6770.0 25 8524.0 26 10278.0 27 13754.0 28 17230.0 29 21197.5 30 25165.0 31 29566.5 32 33968.0 33 41010.0 34 48052.0 35 57054.0 36 66056.0 37 75960.0 38 85864.0 39 92333.5 40 98803.0 41 106444.5 42 114086.0 43 116897.0 44 119708.0 45 131816.0 46 143924.0 47 154437.5 48 164951.0 49 170190.0 50 175429.0 51 171404.0 52 167379.0 53 165616.5 54 163854.0 55 163713.5 56 163573.0 57 159914.0 58 156255.0 59 141670.5 60 127086.0 61 111701.0 62 96316.0 63 83481.5 64 70647.0 65 59945.0 66 49243.0 67 42092.0 68 34941.0 69 31118.0 70 27295.0 71 21142.0 72 14989.0 73 12643.0 74 10297.0 75 8198.0 76 6099.0 77 5248.0 78 4397.0 79 3598.0 80 2799.0 81 2252.0 82 1705.0 83 1409.5 84 1114.0 85 794.0 86 474.0 87 326.0 88 178.0 89 138.5 90 99.0 91 92.5 92 86.0 93 72.0 94 58.0 95 58.5 96 59.0 97 43.5 98 28.0 99 26.0 100 24.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008610205245767546 2 4.93293008872099E-4 3 2.690689139302358E-4 4 0.0 5 0.0 6 4.4844818988372636E-4 7 1.345344569651179E-4 8 0.0 9 0.0013453445696511791 10 8.5205156077908E-4 11 0.0 12 1.345344569651179E-4 13 2.690689139302358E-4 14 2.690689139302358E-4 15 0.004663861174790754 16 8.072067417907074E-4 17 0.0 18 3.139137329186085E-4 19 4.4844818988372636E-5 20 5.381378278604716E-4 21 0.0 22 1.345344569651179E-4 23 8.5205156077908E-4 24 4.4844818988372636E-4 25 0.0017489479405465328 26 0.00578498164950007 27 0.005201999002651226 28 0.00340820624311632 29 0.0027355339582907307 30 0.0038118096140116737 31 0.007175171038139622 32 0.002511309863348868 33 0.004305102622883773 34 0.0027355339582907307 35 0.0027355339582907307 36 0.006592188391290777 37 0.003183982148174457 38 0.007040636581174504 39 0.005022619726697736 40 0.0028700684152558487 41 0.003991188889965165 42 0.0019283272165000235 43 0.0015695686645930424 44 0.0013004997506628065 45 0.0015695686645930424 46 8.968963797674527E-4 47 0.002287085768407004 48 0.0017937927595349055 49 2.690689139302358E-4 50 0.00170410312155816 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2229912.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.94193504919984 #Duplication Level Percentage of deduplicated Percentage of total 1 75.97683354814053 39.46383753401383 2 13.382695441800236 13.902461948424211 3 4.460403394193198 6.95045950183241 4 1.9681058631575266 4.089089076563105 5 1.0939406901279132 2.8410698137150456 6 0.6672939810120683 2.0796324372270503 7 0.46288434699978465 1.6830176081007866 8 0.33706669102267917 1.400631693787897 9 0.2387349374395433 1.1160319153013591 >10 1.25496822451457 11.519602524259076 >50 0.08175461962218479 2.9481143403310264 >100 0.06401581316798217 6.945002303279328 >500 0.008433365644554963 2.992797953255919 >1k 0.00286908315742587 2.068251349908954 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.345344569651179E-4 7 0.0 0.0 0.0 0.0 1.345344569651179E-4 8 0.0 0.0 0.0 0.0 1.345344569651179E-4 9 0.0 0.0 0.0 0.0 1.345344569651179E-4 10 0.0 0.0 0.0 0.0 1.345344569651179E-4 11 0.0 0.0 0.0 0.0 1.345344569651179E-4 12 0.0 0.0 0.0 0.0 2.690689139302358E-4 13 0.0 0.0 0.0 0.0 2.690689139302358E-4 14 4.4844818988372636E-5 0.0 0.0 0.0 3.1391373291860843E-4 15 4.4844818988372636E-5 0.0 0.0 0.0 4.93293008872099E-4 16 4.4844818988372636E-5 0.0 0.0 0.0 6.278274658372169E-4 17 4.4844818988372636E-5 0.0 0.0 0.0 6.278274658372169E-4 18 4.4844818988372636E-5 0.0 0.0 4.4844818988372636E-5 6.278274658372169E-4 19 4.4844818988372636E-5 0.0 0.0 8.968963797674527E-5 6.278274658372169E-4 20 4.4844818988372636E-5 0.0 0.0 1.7937927595349055E-4 6.278274658372169E-4 21 4.4844818988372636E-5 0.0 0.0 2.2422409494186318E-4 6.278274658372169E-4 22 4.4844818988372636E-5 0.0 0.0 3.1391373291860843E-4 6.278274658372169E-4 23 4.4844818988372636E-5 0.0 0.0 4.036033708953537E-4 7.623619228023348E-4 24 4.4844818988372636E-5 0.0 0.0 7.175171038139622E-4 7.623619228023348E-4 25 4.4844818988372636E-5 0.0 0.0 8.968963797674527E-4 7.623619228023348E-4 26 4.4844818988372636E-5 0.0 0.0 0.0013004997506628063 8.520515607790801E-4 27 4.4844818988372636E-5 0.0 0.0 0.0016592583025697874 8.520515607790801E-4 28 4.4844818988372636E-5 0.0 0.0 0.0027803787772791035 8.520515607790801E-4 29 8.968963797674527E-5 0.0 0.0 0.004619016355802382 8.520515607790801E-4 30 8.968963797674527E-5 0.0 0.0 0.008296291512848938 8.520515607790801E-4 31 8.968963797674527E-5 0.0 0.0 0.02009047890679094 8.968963797674527E-4 32 8.968963797674527E-5 0.0 0.0 0.03251249376657016 9.86586017744198E-4 33 8.968963797674527E-5 0.0 0.0 0.04488966380736101 9.86586017744198E-4 34 8.968963797674527E-5 0.0 0.0 0.05937454034060537 0.0011211204747093159 35 8.968963797674527E-5 0.0 0.0 0.0773573127549428 0.0011211204747093159 36 8.968963797674527E-5 0.0 0.0 0.10287401475932682 0.0011211204747093159 37 8.968963797674527E-5 0.0 0.0 0.13816688730317608 0.0011211204747093159 38 8.968963797674527E-5 0.0 0.0 0.18485034387007201 0.0011659652936976885 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3365 0.0 24.64699 1 GGTATCA 1650 0.0 20.132635 1 GATATAC 475 0.0 18.06253 1 AACGCAG 4855 0.0 16.85513 6 CGTCTTA 210 9.094947E-12 16.760572 15 TCAACGC 4895 0.0 16.717398 4 TTAGGAC 695 0.0 16.458017 3 ATTTCGT 555 0.0 16.251326 42 CAACGCA 5025 0.0 16.197353 5 ATCAACG 5055 0.0 16.14402 3 TATCAAC 5120 0.0 16.067953 2 GTATAGG 290 0.0 15.930482 1 GATTTCG 515 0.0 15.805633 41 TATACTG 335 0.0 15.759588 5 TAGGACG 960 0.0 15.581744 4 GTGTATA 540 0.0 15.480945 1 ACCGTCG 505 0.0 15.24597 8 CGTCGTA 495 0.0 15.110587 10 ATACACT 600 0.0 15.031802 4 TAGGACC 1325 0.0 14.941874 4 >>END_MODULE