FastQCFastQC Report
Thu 2 Feb 2017
SRR4063906_2.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4063906_2.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13507
Sequences flagged as poor quality0
Sequence length25
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGG810.5996890501221589No Hit
GATATACACTGTTCTACAAATCCCG260.192492781520693No Hit
GTATCAACGCAGAGTACATGGGGGC250.18508921300066633No Hit
ATATTAACATGTATAGCAATTGAGG210.1554749389205597No Hit
GTCTAAACTCCATCCCCACAGTTCC200.14807137040053306No Hit
TTCCTAGACAGAGGCATAATTCAGC200.14807137040053306No Hit
GTATCAACGCAGAGTACTTTTTTTT190.1406678018805064No Hit
ATCATACACAGCGTGACAGGCACGA190.1406678018805064No Hit
TATCAACGCAGAGTACATGGGGGCC170.1258606648404531No Hit
GGTATCAACGCAGAGTACATGGGGG170.1258606648404531No Hit
ACATAAGAGGGATACCTGCACCAAT170.1258606648404531No Hit
GTGTACTACTGTGGACTAAAGTACA170.1258606648404531No Hit
TTATAATACAACGTAAATAAATGTC170.1258606648404531No Hit
GTTCTACAAATCCCGTTTCCAACGA170.1258606648404531No Hit
GGGTGGCCCAGGTCCGTTTTGTGAC160.11845709632042645No Hit
TTATTAAGCCACTTCCCAGCAGTCA160.11845709632042645No Hit
GTCTAGGAATGAAGAGATGATATTC150.1110535278003998No Hit
GTCCTACCTTATCCATGAGCACATG150.1110535278003998No Hit
GGTATCAACGCAGAGTACTTTTTTT150.1110535278003998No Hit
TCCTTATCCTTTCTGTTCCTCTCAA150.1110535278003998No Hit
GTGATAATCTGTTATAAAAACAGAA150.1110535278003998No Hit
CTCCCGGGAAGGGCCTGTCCCAGTC150.1110535278003998No Hit
GTCTTATAGTATCGAGCCAATCGGT140.10364995928037314No Hit
CCTGTGGAGTATGCAAAAGTGTGGA140.10364995928037314No Hit
GTGTAAAACTATACACCTGCATCCA140.10364995928037314No Hit
GATTAGATGAGTGAGTTACACTGAA140.10364995928037314No Hit
ACAATATTCTGTGCCCTTGGAAATC140.10364995928037314No Hit
GCACTAGAGTGTAAAACTATACACC140.10364995928037314No Hit
GTACATGGGGGCCCAAAAGAAGGTC140.10364995928037314No Hit
GTACATGGGGTGTGATGAGCGGACG140.10364995928037314No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)