##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063905_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1921808 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.01747312946975 32.0 32.0 32.0 32.0 32.0 2 30.720583950113642 32.0 32.0 32.0 32.0 32.0 3 31.101610046373 32.0 32.0 32.0 32.0 32.0 4 31.318606229134232 32.0 32.0 32.0 32.0 32.0 5 31.12818866400806 32.0 32.0 32.0 32.0 32.0 6 34.7091015335559 36.0 36.0 36.0 32.0 36.0 7 34.74164224521908 36.0 36.0 36.0 32.0 36.0 8 34.643560647057356 36.0 36.0 36.0 32.0 36.0 9 34.88594438154072 36.0 36.0 36.0 32.0 36.0 10 34.56403085011614 36.0 36.0 36.0 32.0 36.0 11 34.90335819186932 36.0 36.0 36.0 32.0 36.0 12 34.72442564501761 36.0 36.0 36.0 32.0 36.0 13 34.830683918476765 36.0 36.0 36.0 32.0 36.0 14 34.74351339988178 36.0 36.0 36.0 32.0 36.0 15 34.66416312139402 36.0 36.0 36.0 32.0 36.0 16 34.69531711804717 36.0 36.0 36.0 32.0 36.0 17 34.63950040794918 36.0 36.0 36.0 32.0 36.0 18 34.65279153796841 36.0 36.0 36.0 32.0 36.0 19 34.65761303938791 36.0 36.0 36.0 32.0 36.0 20 34.65635588987037 36.0 36.0 36.0 32.0 36.0 21 34.6446689783787 36.0 36.0 36.0 32.0 36.0 22 34.63011237334843 36.0 36.0 36.0 32.0 36.0 23 34.55628033601692 36.0 36.0 36.0 32.0 36.0 24 34.52621697901143 36.0 36.0 36.0 32.0 36.0 25 34.48448284115791 36.0 36.0 36.0 32.0 36.0 26 34.399907274816215 36.0 36.0 36.0 32.0 36.0 27 34.39931356306145 36.0 36.0 36.0 32.0 36.0 28 34.374454680176164 36.0 36.0 36.0 32.0 36.0 29 34.331787046364674 36.0 36.0 36.0 32.0 36.0 30 34.309764034700656 36.0 36.0 36.0 32.0 36.0 31 34.31816133557567 36.0 36.0 36.0 32.0 36.0 32 34.265831446221476 36.0 36.0 36.0 32.0 36.0 33 34.223376632837414 36.0 36.0 36.0 32.0 36.0 34 34.22021086393646 36.0 36.0 36.0 32.0 36.0 35 34.180013299975855 36.0 36.0 36.0 32.0 36.0 36 34.135481796308476 36.0 36.0 36.0 32.0 36.0 37 34.13752830667788 36.0 36.0 36.0 32.0 36.0 38 34.083569742658995 36.0 36.0 36.0 32.0 36.0 39 34.096008550281816 36.0 36.0 36.0 32.0 36.0 40 34.06654983224131 36.0 36.0 36.0 32.0 36.0 41 34.03744234595756 36.0 36.0 36.0 32.0 36.0 42 33.952351639705945 36.0 36.0 36.0 32.0 36.0 43 33.96158044924363 36.0 36.0 36.0 32.0 36.0 44 33.86446044558041 36.0 36.0 36.0 32.0 36.0 45 33.83719185267207 36.0 36.0 36.0 32.0 36.0 46 33.82332574325843 36.0 36.0 36.0 32.0 36.0 47 33.8135021812793 36.0 36.0 36.0 32.0 36.0 48 33.75643872853063 36.0 36.0 36.0 32.0 36.0 49 33.73130770607678 36.0 36.0 36.0 27.0 36.0 50 32.953621277463725 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 3.0 19 3.0 20 11.0 21 48.0 22 204.0 23 545.0 24 1664.0 25 3707.0 26 7907.0 27 14846.0 28 25840.0 29 41903.0 30 64094.0 31 98081.0 32 151531.0 33 251382.0 34 465962.0 35 794076.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.13917512361489 19.084724206871645 12.766184418539058 26.009916250974403 2 16.244631329619448 20.689011019888667 36.25578754895156 26.810570101540325 3 17.81512692494816 24.57705126170449 28.913079110523697 28.69474270282365 4 12.399105425724109 16.44898970136455 36.0977787583359 35.05412611457544 5 15.228472355198855 36.18665340138036 32.51646366338365 16.06841058003713 6 34.58989574379073 35.97801857005189 16.235578654222806 13.19650703193458 7 30.65755302171342 30.429746587456492 20.524329446193086 18.388370944637 8 28.550510769025834 32.30239441192877 18.889920325027266 20.25717449401813 9 27.236894071807278 14.137236097936135 18.24540023509418 40.38046959516241 10 16.039673408815005 26.172825244784683 30.6567155325423 27.13078581385801 11 37.52024135605638 20.834859673807166 22.24587471797391 19.399024252162548 12 25.208384825723734 23.238830162269323 28.06564661867359 23.48713839333335 13 29.239380539722614 19.10441346194873 25.37186453130968 26.284341467018972 14 24.03512533015854 19.634208275141482 24.598762412816292 31.73190398188369 15 25.412921995846453 27.105926896116056 21.772141886663636 25.709009221373858 16 26.477922099546987 25.527139858444176 22.978260846941335 25.016677195067505 17 24.380219043733817 25.850084920033634 24.513687111303522 25.256008924929024 18 25.444191557316397 24.42452568053175 25.672986763492254 24.458295998659594 19 25.937866842057062 24.750027057853856 24.86434649038822 24.447759609700864 20 26.23378272269698 23.838415479710875 24.24241320475202 25.685388592840123 21 27.419284340579285 23.871791562944892 23.942558257640723 24.766365838835096 22 26.232564577277834 23.84507073034427 24.52562849736134 25.39673619501656 23 24.563430117598084 23.586793630970966 25.321989801228018 26.527786450202935 24 25.220339618046772 24.682408109871652 24.631570512320184 25.465681759761395 25 25.235445172066594 24.13745554263354 24.90793715217883 25.71916213312103 26 25.15011284156233 24.921151405432944 25.19538476188791 24.73335099111682 27 25.838921285074523 24.41611411598309 24.2177995039793 25.527165094963088 28 24.814737916790904 24.263257667412347 25.369496450346745 25.552507965450005 29 24.97542618462962 24.32409649274806 25.225665418332454 25.47481190428987 30 24.907649518278866 24.431001870685908 25.482124412321028 25.179224198714195 31 25.628848833784502 24.297986247493085 24.324005066384412 25.749159852338 32 25.320929438713012 24.326789685715504 24.120260469298486 26.232020406272994 33 24.686925327280505 24.116350443815154 25.001847278464478 26.19487695043986 34 25.619118684708425 24.069917013743623 25.16391190593642 25.14705239561153 35 26.408754854904444 23.91048243076167 24.777808767759687 24.902953946574197 36 24.96177827548991 24.678016446009277 24.534652455505128 25.82555282299569 37 26.15121873546244 24.400206895188024 24.382774830804905 25.065799538544635 38 25.176200725201802 24.095631304405746 25.03960093085605 25.6885670395364 39 25.770457817808484 24.106138841377142 24.281239934288955 25.842163406525415 40 26.008924041576147 24.456505053921504 24.77964381886537 24.754927085636975 41 24.786627660714824 24.864889335702 25.17382521628634 25.174657787296837 42 26.51196673925543 24.870888262734905 24.309379040839634 24.307765957170027 43 25.5288957621214 23.788536398674776 24.8644620865892 25.818105752614624 44 25.233713915227124 24.507309316191016 24.33684359509916 25.922133173482692 45 25.317815847629475 24.806365318981427 24.47927425955711 25.396544573831985 46 25.16085222409258 24.570570742456923 24.573848927695202 25.6947281057553 47 25.54532890409704 24.271715329986428 24.964095711466893 25.21886005444963 48 26.444143681453486 25.061726660557742 23.694920175524864 24.799209482463905 49 25.299367935980815 25.097369704115778 24.07905301230774 25.524209347595665 50 25.620750697528237 24.959022492618846 23.96583178355967 25.454395026293252 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 16.5 2 24.0 3 62.0 4 100.0 5 122.5 6 145.0 7 146.0 8 147.0 9 220.0 10 293.0 11 438.5 12 584.0 13 1173.5 14 1763.0 15 2401.5 16 3040.0 17 3377.5 18 3715.0 19 3824.0 20 3933.0 21 4432.5 22 4932.0 23 5657.5 24 6383.0 25 7986.0 26 9589.0 27 12242.5 28 14896.0 29 17400.0 30 19904.0 31 22488.0 32 25072.0 33 29442.0 34 33812.0 35 39708.0 36 45604.0 37 56912.0 38 68220.0 39 75291.0 40 82362.0 41 91947.5 42 101533.0 43 102115.5 44 102698.0 45 114154.5 46 125611.0 47 135240.5 48 144870.0 49 148437.0 50 152004.0 51 146691.0 52 141378.0 53 139860.5 54 138343.0 55 140244.5 56 142146.0 57 139105.5 58 136065.0 59 123571.0 60 111077.0 61 98575.0 62 86073.0 63 75075.0 64 64077.0 65 54850.0 66 45623.0 67 39161.0 68 32699.0 69 30255.0 70 27811.0 71 21422.5 72 15034.0 73 12958.5 74 10883.0 75 8573.0 76 6263.0 77 5545.0 78 4827.0 79 3965.0 80 3103.0 81 2611.0 82 2119.0 83 1803.5 84 1488.0 85 1087.0 86 686.0 87 491.5 88 297.0 89 236.0 90 175.0 91 150.0 92 125.0 93 102.0 94 79.0 95 80.5 96 82.0 97 69.0 98 56.0 99 56.0 100 56.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0059319141142091195 2 5.203433433516772E-4 3 1.5610300300550315E-4 4 0.0 5 0.0 6 2.0813733734067086E-4 7 5.2034334335167716E-5 8 0.0 9 0.0013008583583791929 10 8.845836836978511E-4 11 0.0 12 1.5610300300550315E-4 13 3.122060060110063E-4 14 2.0813733734067086E-4 15 0.0040066437438079135 16 0.0011447553553736898 17 0.0 18 1.0406866867033543E-4 19 0.0 20 7.805150150275157E-4 21 0.0 22 1.0406866867033543E-4 23 4.162746746813417E-4 24 1.0406866867033543E-4 25 0.0011967896897088575 26 0.004526987087159592 27 0.0059319141142091195 28 0.0036944377377969083 29 0.0024456137137528824 30 0.002757819719763889 31 0.006348188788890461 32 0.002393579379417715 33 0.003226128728780399 34 0.0022895107107473796 35 0.002081373373406709 36 0.006556326126231133 37 0.003226128728780399 38 0.007076669469582809 39 0.0031740943944452305 40 0.0017171330330605346 41 0.0026017167167583857 42 0.0011967896897088575 43 0.0010927210210385221 44 7.284806806923481E-4 45 9.886523523681865E-4 46 6.764463463571804E-4 47 0.001665098698725367 48 0.0015089956957198638 49 4.6830900901650947E-4 50 0.0011447553553736898 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1921808.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.880950156283596 #Duplication Level Percentage of deduplicated Percentage of total 1 76.55024525817535 38.1839896817433 2 13.132718172984967 13.101449212063656 3 4.443745021254802 6.6497467173733265 4 1.9917072412616244 3.9739299850912078 5 1.0305538440635895 2.5702502464551182 6 0.6150214136910881 1.8406711488823342 7 0.4304767279279479 1.5030811746449817 8 0.2905415174000603 1.159398955821073 9 0.21225856943102983 0.9528893209829933 >10 1.1183135846350283 9.877905541675094 >50 0.08550152843397071 3.008520859130661 >100 0.08236205654174887 9.050901066750917 >500 0.01068744650814628 3.77811096364994 >1k 0.005867617690746976 4.349155125735477 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 2704 0.1407008400422935 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 2492 0.12966956116323797 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 2470 0.12852480580786427 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 2358 0.12269696036232547 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 2310 0.12019931231423743 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATGGTCGGAACTACG 2202 0.11457960420603931 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 2150 0.11187381882061058 No Hit ATACAGGACTCTTTCGAGGCCCTGTAATTGGAATGAGTCCACTTTAAATC 2124 0.11052092612789623 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 2104 0.10948023944119288 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 2075 0.107971243745473 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 2041 0.10620207637807731 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGATCTTGGGAGCGG 1977 0.10287187898062658 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.5610300300550315E-4 2 0.0 0.0 0.0 0.0 1.5610300300550315E-4 3 0.0 0.0 0.0 0.0 1.5610300300550315E-4 4 0.0 0.0 0.0 0.0 1.5610300300550315E-4 5 0.0 0.0 0.0 0.0 1.5610300300550315E-4 6 0.0 0.0 0.0 0.0 2.601716716758386E-4 7 0.0 0.0 0.0 0.0 2.601716716758386E-4 8 0.0 0.0 0.0 0.0 2.601716716758386E-4 9 0.0 0.0 0.0 0.0 2.601716716758386E-4 10 0.0 0.0 0.0 0.0 2.601716716758386E-4 11 0.0 0.0 0.0 0.0 2.601716716758386E-4 12 0.0 0.0 0.0 0.0 7.805150150275158E-4 13 0.0 0.0 0.0 0.0 7.805150150275158E-4 14 0.0 0.0 0.0 0.0 7.805150150275158E-4 15 0.0 0.0 0.0 0.0 9.886523523681865E-4 16 0.0 0.0 0.0 0.0 0.0010406866867033544 17 0.0 0.0 0.0 0.0 0.0010406866867033544 18 0.0 0.0 0.0 0.0 0.0010927210210385221 19 0.0 0.0 0.0 5.2034334335167716E-5 0.0011447553553736898 20 0.0 0.0 0.0 1.0406866867033543E-4 0.0012488240240440252 21 0.0 0.0 0.0 1.5610300300550315E-4 0.0013008583583791929 22 0.0 0.0 0.0 2.0813733734067086E-4 0.0013008583583791929 23 0.0 0.0 0.0 3.6424034034617404E-4 0.0013008583583791929 24 0.0 0.0 0.0 6.244120120220126E-4 0.0013008583583791929 25 0.0 0.0 0.0 6.244120120220126E-4 0.0013008583583791929 26 0.0 0.0 0.0 7.284806806923481E-4 0.0014569613613846961 27 0.0 0.0 0.0 9.366180180330189E-4 0.0014569613613846961 28 0.0 0.0 0.0 0.0013008583583791929 0.0014569613613846961 29 0.0 0.0 0.0 0.0018732360360660379 0.0014569613613846961 30 0.0 0.0 0.0 0.0035903690691265725 0.0014569613613846961 31 0.0 0.0 0.0 0.007805150150275157 0.0015089956957198638 32 0.0 0.0 0.0 0.013372823924138104 0.0015610300300550315 33 0.0 0.0 0.0 0.017483536336616354 0.0015610300300550315 34 0.0 0.0 0.0 0.022322729429786952 0.0015610300300550315 35 0.0 0.0 0.0 0.029711604905380766 0.0015610300300550315 36 0.0 0.0 0.0 0.04058678078143082 0.0015610300300550315 37 0.0 0.0 0.0 0.057289802103019656 0.0015610300300550315 38 0.0 0.0 0.0 0.08226628258390016 0.0015610300300550315 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3205 0.0 23.40629 1 ATACCGT 695 0.0 20.574224 6 TATACCG 75 5.4774788E-5 20.532022 5 TACCGTC 670 0.0 20.356909 7 ACCGTCG 660 0.0 20.332035 8 CGTCGTA 665 0.0 20.179688 10 AATCACG 190 0.0 19.685514 34 CCGTCGT 685 0.0 19.269342 9 GGTATCA 1555 0.0 19.098955 1 GTCGTAG 740 0.0 17.837162 11 TTCCGCG 75 0.001291123 17.60025 29 TATAGGG 155 1.441731E-8 17.03117 2 AACGCAG 4455 0.0 16.690292 6 TCAACGC 4590 0.0 16.1994 4 GTATAGG 205 1.05501385E-10 16.09695 1 GGCGTTA 780 0.0 16.075897 42 TATACAG 260 0.0 16.075897 5 GCATTCG 835 0.0 16.07334 22 TACGACG 685 0.0 16.057367 5 TGTAGGA 555 0.0 15.854843 2 >>END_MODULE