##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063904_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3390923 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35597299024484 32.0 32.0 32.0 32.0 32.0 2 31.416940461343415 32.0 32.0 32.0 32.0 32.0 3 31.494051914478742 32.0 32.0 32.0 32.0 32.0 4 31.57471254876622 32.0 32.0 32.0 32.0 32.0 5 31.52646314882408 32.0 32.0 32.0 32.0 32.0 6 35.12264802238211 36.0 36.0 36.0 36.0 36.0 7 35.144040133025726 36.0 36.0 36.0 36.0 36.0 8 35.08767819263369 36.0 36.0 36.0 36.0 36.0 9 35.1994589673667 36.0 36.0 36.0 36.0 36.0 10 35.05829268314261 36.0 36.0 36.0 36.0 36.0 11 35.19389175159684 36.0 36.0 36.0 36.0 36.0 12 35.118047505059835 36.0 36.0 36.0 36.0 36.0 13 35.150130510188525 36.0 36.0 36.0 36.0 36.0 14 35.09467835158746 36.0 36.0 36.0 36.0 36.0 15 35.070289711680275 36.0 36.0 36.0 36.0 36.0 16 35.08785336617788 36.0 36.0 36.0 36.0 36.0 17 35.06314151043831 36.0 36.0 36.0 36.0 36.0 18 35.05679338634348 36.0 36.0 36.0 36.0 36.0 19 35.04636879103418 36.0 36.0 36.0 36.0 36.0 20 35.044827322826265 36.0 36.0 36.0 36.0 36.0 21 35.036926819040126 36.0 36.0 36.0 36.0 36.0 22 35.018971235855254 36.0 36.0 36.0 36.0 36.0 23 34.97416603090073 36.0 36.0 36.0 36.0 36.0 24 34.95238081195002 36.0 36.0 36.0 36.0 36.0 25 34.92394607603888 36.0 36.0 36.0 36.0 36.0 26 34.87032793136264 36.0 36.0 36.0 32.0 36.0 27 34.85731878901408 36.0 36.0 36.0 32.0 36.0 28 34.83838205703875 36.0 36.0 36.0 32.0 36.0 29 34.81274832840498 36.0 36.0 36.0 32.0 36.0 30 34.79288117129171 36.0 36.0 36.0 32.0 36.0 31 34.78425520131245 36.0 36.0 36.0 32.0 36.0 32 34.74959207271884 36.0 36.0 36.0 32.0 36.0 33 34.7444734073879 36.0 36.0 36.0 32.0 36.0 34 34.73076504538735 36.0 36.0 36.0 32.0 36.0 35 34.704787457574234 36.0 36.0 36.0 32.0 36.0 36 34.67686172761812 36.0 36.0 36.0 32.0 36.0 37 34.65776515715633 36.0 36.0 36.0 32.0 36.0 38 34.62989722857169 36.0 36.0 36.0 32.0 36.0 39 34.60973428178699 36.0 36.0 36.0 32.0 36.0 40 34.611821324164545 36.0 36.0 36.0 32.0 36.0 41 34.60095525613528 36.0 36.0 36.0 32.0 36.0 42 34.55341097394426 36.0 36.0 36.0 32.0 36.0 43 34.54719762141458 36.0 36.0 36.0 32.0 36.0 44 34.495537940554826 36.0 36.0 36.0 32.0 36.0 45 34.471864150262334 36.0 36.0 36.0 32.0 36.0 46 34.4441427894411 36.0 36.0 36.0 32.0 36.0 47 34.425968386778464 36.0 36.0 36.0 32.0 36.0 48 34.386531336748135 36.0 36.0 36.0 32.0 36.0 49 34.36818087582643 36.0 36.0 36.0 32.0 36.0 50 33.79943130528178 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 4.0 19 13.0 20 24.0 21 110.0 22 340.0 23 967.0 24 2410.0 25 5509.0 26 11460.0 27 21166.0 28 35145.0 29 54547.0 30 79304.0 31 113881.0 32 165575.0 33 269446.0 34 572872.0 35 2058147.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.63608690946081 18.259817041717284 12.716830516287784 26.387265532534126 2 15.400029903486057 20.016520643874546 38.19642461652613 26.387024836113266 3 18.56549168009475 23.79380247863107 28.609303005924087 29.0314028353501 4 12.512080044282929 16.622671762231107 35.75392304691082 35.11132514657513 5 14.384785499405325 36.8776288933721 33.62801219608939 15.109573411133193 6 34.243746671251465 35.61317096216536 16.855779887074696 13.287302479508476 7 30.27974979083866 30.355392912195295 20.453988486320686 18.91086881064536 8 27.601637548725687 34.498522820636985 18.927300598480297 18.972539032157034 9 27.052441005674932 14.907470840139586 18.441217419564317 39.59887073462116 10 15.837032947653332 27.677597707271296 31.926034845088054 24.55933449998732 11 36.671029295277215 21.225849488723124 22.838095361674494 19.265025854325167 12 24.76479090181747 23.368561737983125 29.483541187506983 22.38310617269242 13 29.887790951259884 20.276929183760195 24.97249257793573 24.86278728704419 14 23.187853168575153 19.858509915777745 25.43114545391811 31.52249146172899 15 24.85290166596918 28.356689460973193 22.06851032467952 24.721898548378107 16 25.06471752253833 26.16720094134578 24.489293371356784 24.278788164759106 17 23.720296804144475 26.534014485141654 25.46701886182612 24.278669848887752 18 24.052113413736482 25.899993865957004 26.66978677122851 23.378105949078005 19 25.590849453084015 25.079454767920122 25.25067658569658 24.079019193299285 20 25.705528655102178 25.221349984974477 25.344768655609418 23.72835270431393 21 26.070364912444195 24.71893345853032 24.698142659093115 24.512558969932375 22 25.447342252064043 25.174672566350804 25.208586706364887 24.169398475220266 23 24.625814349418455 25.345977775202254 25.243320572698018 24.784887302681266 24 24.843788337768718 25.253589594775683 25.43404252307344 24.46857954438216 25 24.904449469694555 25.097762348136587 25.630898918155665 24.366889264013192 26 24.243337601813877 25.805442224218506 25.78055094660585 24.170669227361767 27 24.639881982862505 25.496520771263935 25.468178490893017 24.395418754980543 28 24.32096147590515 25.66923254100007 25.342818643577438 24.666987339517345 29 24.574302526772808 25.218713790389245 25.117913017013155 25.089070665824792 30 24.46988723565142 25.489384768378326 25.454525614694873 24.586202381275385 31 25.16618343040823 24.963480787487825 25.15075880037078 24.71957698173317 32 24.66701800961956 25.569430685805912 25.093554645969874 24.669996658604653 33 24.34170867313053 25.519442907582636 25.491012602529 24.647835816757837 34 24.738308292207613 25.398354735223492 25.60019369934488 24.263143273224014 35 24.741876139475654 25.452649422822955 25.623434372985365 24.182040064716023 36 24.383377090973223 25.646587700396918 25.498149910076133 24.471885298553726 37 24.84052464222371 25.262725145584852 25.073389630665982 24.823360581525456 38 24.70939269015041 25.584680023759397 25.1160394236163 24.58988786247389 39 25.069585882161416 24.975831476825057 25.23589009470994 24.718692546303586 40 25.541187077039773 25.068825270958495 25.330855279513916 24.059132372487824 41 24.844904772296967 24.94240331247309 25.946791631522757 24.265900283707186 42 25.025222252204827 25.61501450224206 25.401292594345676 23.95847065120744 43 24.449058133962474 25.21596932945036 25.757157075975968 24.5778154606112 44 24.20040502843958 25.477008428213026 25.412924636222 24.90966190712539 45 24.425059733862124 25.492896521663738 25.45544305096562 24.626600693508518 46 24.54521513384838 24.99214807680228 25.300267864857855 25.162368924491485 47 24.88469695034898 25.133749768125778 25.437567663772505 24.543985617752735 48 24.593007172841233 25.374228142475356 25.06616342942145 24.96660125526196 49 24.64253727535917 25.278088821506184 25.391509602281154 24.687864300853487 50 24.51215423030679 25.74198356354418 25.049065477751036 24.69679672839799 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 5.0 1 20.0 2 35.0 3 103.0 4 171.0 5 207.0 6 243.0 7 243.0 8 243.0 9 339.5 10 436.0 11 683.5 12 931.0 13 1703.5 14 2476.0 15 3310.0 16 4144.0 17 4231.0 18 4318.0 19 4562.0 20 4806.0 21 5820.0 22 6834.0 23 8998.0 24 11162.0 25 15382.5 26 19603.0 27 26982.0 28 34361.0 29 41968.0 30 49575.0 31 58274.5 32 66974.0 33 80155.0 34 93336.0 35 110181.5 36 127027.0 37 137609.5 38 148192.0 39 155460.0 40 162728.0 41 171210.5 42 179693.0 43 185643.0 44 191593.0 45 206126.5 46 220660.0 47 232213.0 48 243766.0 49 251459.5 50 259153.0 51 258868.0 52 258583.0 53 255653.0 54 252723.0 55 244179.0 56 235635.0 57 223331.5 58 211028.0 59 192769.5 60 174511.0 61 153717.0 62 132923.0 63 115375.5 64 97828.0 65 81568.0 66 65308.0 67 55687.5 68 46067.0 69 38502.5 70 30938.0 71 24711.5 72 18485.0 73 15747.0 74 13009.0 75 10509.5 76 8010.0 77 6766.0 78 5522.0 79 4499.0 80 3476.0 81 2778.0 82 2080.0 83 1601.0 84 1122.0 85 834.5 86 547.0 87 418.5 88 290.0 89 220.0 90 150.0 91 111.0 92 72.0 93 58.0 94 44.0 95 44.5 96 45.0 97 42.5 98 40.0 99 31.0 100 22.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009260015635860796 2 4.1286693917850684E-4 3 5.60319417456545E-4 4 0.0 5 0.0 6 2.6541446090046873E-4 7 0.0 8 2.9490495655607633E-5 9 0.0013565628001579511 10 8.552243740126214E-4 11 2.9490495655607633E-5 12 1.1796198262243053E-4 13 5.898099131121526E-4 14 4.1286693917850684E-4 15 0.004836441287519652 16 9.731863566350519E-4 17 0.0 18 3.2439545221168395E-4 19 0.0 20 7.667528870457985E-4 21 0.0 22 2.0643346958925342E-4 23 7.667528870457985E-4 24 3.2439545221168395E-4 25 0.0013860532958135587 26 0.005219817731042551 27 0.0067533235051341475 28 0.004010707409162638 29 0.00224127766982618 30 0.0039812169135070305 31 0.007136699948657048 32 0.0036568214612953467 33 0.0051608367397313355 34 0.002978540061216371 35 0.003214464026461232 36 0.008168867296603315 37 0.003450387991706093 38 0.007814981348736023 39 0.004394083852685537 40 0.0026541446090046867 41 0.003037521052527586 42 0.002005353704581319 43 0.0014155437914691663 44 0.0014745247827803816 45 0.001445034287124774 46 0.0010026768522906596 47 0.00224127766982618 48 0.0022707681654817874 49 2.949049565560763E-4 50 0.0013565628001579511 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3390923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.50849674955882 #Duplication Level Percentage of deduplicated Percentage of total 1 62.99072596254044 26.776410698310006 2 16.113523092055893 13.699232879651976 3 7.4577377426038245 9.510516617716105 4 4.1305704941159345 7.023373696918029 5 2.506002415210482 5.3263197760680665 6 1.6377087890216449 4.17699232409103 7 1.1033074343956155 3.2829958342139074 8 0.7889590963108715 2.6829972144852436 9 0.5907710754288629 2.2601511305641067 >10 2.5402567331996773 17.84986243423754 >50 0.09399223726589509 2.6997682478561433 >100 0.04233085263554771 3.349958263095196 >500 0.0034167743327760043 1.007475166722015 >1k 6.973008825581382E-4 0.35394571607056385 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1796198262243053E-4 2 0.0 0.0 0.0 0.0 1.1796198262243053E-4 3 0.0 0.0 0.0 0.0 1.1796198262243053E-4 4 0.0 0.0 0.0 0.0 1.1796198262243053E-4 5 0.0 2.0643346958925342E-4 0.0 0.0 1.1796198262243053E-4 6 0.0 2.0643346958925342E-4 0.0 0.0 1.1796198262243053E-4 7 0.0 2.0643346958925342E-4 0.0 0.0 1.1796198262243053E-4 8 0.0 2.0643346958925342E-4 0.0 2.9490495655607633E-5 1.4745247827803817E-4 9 0.0 2.0643346958925342E-4 0.0 2.9490495655607633E-5 1.7694297393364578E-4 10 0.0 2.0643346958925342E-4 0.0 5.8980991311215265E-5 1.7694297393364578E-4 11 0.0 2.0643346958925342E-4 0.0 8.847148696682289E-5 1.7694297393364578E-4 12 0.0 2.654144609004687E-4 0.0 1.1796198262243053E-4 3.5388594786729156E-4 13 0.0 2.9490495655607634E-4 0.0 1.1796198262243053E-4 4.718479304897221E-4 14 0.0 2.9490495655607634E-4 0.0 1.4745247827803817E-4 5.308289218009373E-4 15 0.0 2.9490495655607634E-4 0.0 1.4745247827803817E-4 7.077718957345831E-4 16 0.0 3.2439545221168395E-4 0.0 2.0643346958925342E-4 7.667528870457985E-4 17 0.0 3.2439545221168395E-4 0.0 2.0643346958925342E-4 7.667528870457985E-4 18 0.0 4.1286693917850684E-4 0.0 2.654144609004687E-4 8.257338783570137E-4 19 0.0 4.1286693917850684E-4 0.0 2.9490495655607634E-4 8.257338783570137E-4 20 0.0 4.423574348341145E-4 0.0 4.423574348341145E-4 9.142053653238366E-4 21 0.0 4.423574348341145E-4 0.0 4.423574348341145E-4 9.731863566350519E-4 22 0.0 4.423574348341145E-4 0.0 6.487909044233679E-4 9.731863566350519E-4 23 0.0 4.718479304897221E-4 0.0 7.372623913901908E-4 0.0010911483392574825 24 0.0 4.718479304897221E-4 0.0 9.731863566350519E-4 0.00112063883491309 25 0.0 5.013384261453298E-4 0.0 0.0014155437914691663 0.00112063883491309 26 0.0 5.013384261453298E-4 0.0 0.0017399392436808503 0.0011501293305686976 27 0.0 5.013384261453298E-4 0.0 0.0021233156872037494 0.0011796198262243054 28 0.0 5.308289218009373E-4 0.0 0.0030965020438388016 0.0011796198262243054 29 0.0 5.308289218009373E-4 0.0 0.00560319417456545 0.001209110321879913 30 0.0 6.193004087677602E-4 0.0 0.009525430096761265 0.001209110321879913 31 0.0 6.193004087677602E-4 0.0 0.021616533315560394 0.0012386008175355205 32 0.0 6.193004087677602E-4 0.0 0.0359489142041857 0.0012680913131911282 33 0.0 6.193004087677602E-4 0.0 0.05290594920616009 0.0012680913131911282 34 0.0 6.193004087677602E-4 0.0 0.07095413254739197 0.001445034287124774 35 0.0 6.487909044233679E-4 0.0 0.09100766959320515 0.001445034287124774 36 0.0 6.487909044233679E-4 0.0 0.12052765574446839 0.0014745247827803816 37 0.0 6.487909044233679E-4 0.0 0.16747652482819575 0.0014745247827803816 38 0.0 6.487909044233679E-4 0.0 0.23542262681871573 0.001533505774091597 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3590 0.0 29.169136 1 GGTATCA 1460 0.0 23.054176 1 TAGGACG 1860 0.0 19.751286 4 TATCAAC 5555 0.0 18.810545 2 GTAGGAC 2160 0.0 18.434149 3 TCAACGC 5635 0.0 18.23118 4 ATCAACG 5720 0.0 18.037445 3 TTAGGAC 1480 0.0 17.985474 3 CAACGCA 5770 0.0 17.880878 5 AACGCAG 5850 0.0 17.673958 6 GTCCTAC 1825 0.0 17.478983 1 TGTAGGA 2545 0.0 16.941822 2 GGACGTG 2145 0.0 16.819319 6 AGGACGT 2230 0.0 16.27687 5 CGCGTAA 230 1.8189894E-12 16.260674 10 GTATAGA 530 0.0 16.188244 1 GACGTGA 1270 0.0 15.935877 7 GATATAC 1115 0.0 14.995114 1 TAGCGTA 295 0.0 14.914194 7 CTGTAGG 2820 0.0 14.90031 1 >>END_MODULE