FastQCFastQC Report
Thu 2 Feb 2017
SRR4063903_1.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR4063903_1.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1413310
Sequences flagged as poor quality0
Sequence length50
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGCCGT550.004484795519.99937244
TAGGACG8450.019.7870624
GTATCAA39300.019.5950341
ATATCCG708.125964E-418.85655219
GTCCTAC11950.018.7803121
CCTAGTA951.5978534E-518.5257342
GATATAC4950.018.224231
TAACGGC1456.3064363E-918.20761336
GTAGGAC11050.018.117723
CTGTAGG11550.018.0972331
AGGACGT9200.017.9348535
TAGGACC10250.017.600074
CATACGG750.001291288417.59944716
AACGCAG43800.017.529756
TCCTACA13500.017.436492
GGACGTG9300.017.2688876
TGTAGGA12000.017.0494652
ACCGTCG3400.016.8235978
ATACCGT3850.016.5714956
TTAGGAC6050.016.3637033
Produced by FastQC (version 0.11.5)