##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063903_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1413310 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.294774677883833 32.0 32.0 32.0 32.0 32.0 2 31.403581662904813 32.0 32.0 32.0 32.0 32.0 3 31.486042694101084 32.0 32.0 32.0 32.0 32.0 4 31.57693570412719 32.0 32.0 32.0 32.0 32.0 5 31.526445012063878 32.0 32.0 32.0 32.0 32.0 6 35.110316208050605 36.0 36.0 36.0 36.0 36.0 7 35.13042786083732 36.0 36.0 36.0 36.0 36.0 8 35.08225371645287 36.0 36.0 36.0 36.0 36.0 9 35.180299438905834 36.0 36.0 36.0 36.0 36.0 10 35.05032866108638 36.0 36.0 36.0 36.0 36.0 11 35.18628114143394 36.0 36.0 36.0 36.0 36.0 12 35.102486361803145 36.0 36.0 36.0 36.0 36.0 13 35.134710007004834 36.0 36.0 36.0 36.0 36.0 14 35.090094883641946 36.0 36.0 36.0 36.0 36.0 15 35.057845058762766 36.0 36.0 36.0 36.0 36.0 16 35.06690464229362 36.0 36.0 36.0 36.0 36.0 17 35.04064996356072 36.0 36.0 36.0 36.0 36.0 18 35.03500788928119 36.0 36.0 36.0 36.0 36.0 19 35.029202368907036 36.0 36.0 36.0 36.0 36.0 20 35.019963065427966 36.0 36.0 36.0 36.0 36.0 21 35.00981101103084 36.0 36.0 36.0 36.0 36.0 22 34.99053569280625 36.0 36.0 36.0 36.0 36.0 23 34.94926378501532 36.0 36.0 36.0 36.0 36.0 24 34.922149422278196 36.0 36.0 36.0 36.0 36.0 25 34.896534376746786 36.0 36.0 36.0 32.0 36.0 26 34.83707608380327 36.0 36.0 36.0 32.0 36.0 27 34.822738818801255 36.0 36.0 36.0 32.0 36.0 28 34.79770538664553 36.0 36.0 36.0 32.0 36.0 29 34.76040146889218 36.0 36.0 36.0 32.0 36.0 30 34.74315330677629 36.0 36.0 36.0 32.0 36.0 31 34.72892359071966 36.0 36.0 36.0 32.0 36.0 32 34.691008342118856 36.0 36.0 36.0 32.0 36.0 33 34.66704473894616 36.0 36.0 36.0 32.0 36.0 34 34.656335128174284 36.0 36.0 36.0 32.0 36.0 35 34.6116909948985 36.0 36.0 36.0 32.0 36.0 36 34.585451882460326 36.0 36.0 36.0 32.0 36.0 37 34.55942503767751 36.0 36.0 36.0 32.0 36.0 38 34.51832860448168 36.0 36.0 36.0 32.0 36.0 39 34.49270931359716 36.0 36.0 36.0 32.0 36.0 40 34.47790435219449 36.0 36.0 36.0 32.0 36.0 41 34.458940359864435 36.0 36.0 36.0 32.0 36.0 42 34.39946650062619 36.0 36.0 36.0 32.0 36.0 43 34.391183816713955 36.0 36.0 36.0 32.0 36.0 44 34.309518789225294 36.0 36.0 36.0 32.0 36.0 45 34.27197147122712 36.0 36.0 36.0 32.0 36.0 46 34.23408735521577 36.0 36.0 36.0 32.0 36.0 47 34.197156320976994 36.0 36.0 36.0 32.0 36.0 48 34.135765684810835 36.0 36.0 36.0 32.0 36.0 49 34.11426297132264 36.0 36.0 36.0 32.0 36.0 50 33.53562488059944 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 0.0 19 6.0 20 13.0 21 51.0 22 156.0 23 454.0 24 1143.0 25 2708.0 26 5557.0 27 9901.0 28 16552.0 29 25056.0 30 35798.0 31 50704.0 32 72948.0 33 117237.0 34 242037.0 35 832987.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.50584607241445 18.319085234554063 12.226687357722456 25.948381335309033 2 15.30517807184007 20.865403529030516 38.480201739750626 25.349216659378786 3 17.899937805180922 25.673936408450853 28.981865858723655 27.44425992764457 4 11.942036778909086 16.79270648336175 36.763979594002734 34.501277143726426 5 13.690626967898053 37.73814662034515 33.68730144129738 14.883924970459416 6 32.93264247238219 36.717518957283936 17.34602977834288 13.003808791990995 7 29.2625942294167 30.925716016205975 21.43336262635268 18.378327128024647 8 27.613403994877274 33.94853216916317 19.450297528496932 18.98776630746262 9 27.694733013796142 14.048740035689672 18.597192091666702 39.65933485884749 10 15.64503301511648 27.326483132997286 32.11049096718867 24.917992884697572 11 36.490154318585446 21.15225958919133 23.537865011922364 18.819721080300855 12 24.938212379599932 23.70429962591337 29.71763428945828 21.63985370502841 13 29.835569584158527 20.196235343730255 25.412455786197295 24.55573928591392 14 23.330724796010493 20.193616678034797 25.91961554027855 30.556042985676157 15 24.674703466975743 28.24979886771545 22.694797590516604 24.3807000747922 16 24.81822684497276 26.018891954998942 25.08158211278568 24.081299087242623 17 23.334583353970466 26.353029413221446 25.984886542938206 24.32750068986988 18 23.869794559560745 25.439660936598962 27.553571239046065 23.13697326479422 19 25.423598094967204 24.797974116063788 25.98193317950993 23.796494609459078 20 25.659344313796524 24.773402353926773 25.765054503721085 23.80219882855562 21 26.514635854837227 24.25334852226334 24.91059993914994 24.321415683749496 22 25.5242310947083 25.081227871065614 25.365313151839512 24.02922788238657 23 24.03134233734476 24.920681867068186 26.125454257282264 24.922521538304785 24 24.703530743649615 25.151984716620674 26.152196985777966 23.992287553951744 25 24.569637405052767 24.892431462868423 26.240354917797898 24.297576214280912 26 23.918241250015036 25.86215558532186 26.571947544315115 23.647655620347983 27 24.382919375302055 25.45818895336701 25.837887331617637 24.321004339713294 28 23.917761246940564 25.47219142247202 26.04003110558563 24.570016225001787 29 24.246980598990856 24.936300527072895 25.86371956806769 24.95299930586856 30 23.989357938383595 25.397237592516593 26.23197430055333 24.38143016854648 31 24.937517513494235 24.99716953628513 25.428815252802867 24.636497697417767 32 24.15926830321037 25.652125612854793 25.45414406235782 24.734462021577016 33 23.93318667384633 25.287015540763814 26.118078105021684 24.661719680368172 34 24.42272340678453 25.386089321674355 26.288320594590996 23.90286667695012 35 24.854132614433194 25.42833287340706 25.945219243315147 23.772315268844594 36 24.103124020404596 25.756521849886532 25.81086617638838 24.329487953320488 37 24.765508028201303 25.566771482832696 25.351737957698045 24.315982531267956 38 24.28190322534992 25.73543356118824 25.587540157658612 24.395123055803225 39 24.86672600962035 25.103413823700482 25.37576401694246 24.654096149736706 40 25.37497930343499 25.389343073337304 25.653126985631985 23.582550637595716 41 24.495635634955676 25.454833633348052 26.255037982995393 23.79449274870088 42 25.20296670313015 26.228095374892273 25.437031145854412 23.131906776123163 43 24.182690674848015 25.484116561569554 25.874126863728474 24.459065899853957 44 23.90548328551364 25.87074885285804 25.509677738900937 24.714090122727388 45 24.136062084658843 26.041678459431004 25.398925631997827 24.42333382391233 46 24.21331337061249 25.565042407809802 25.37852870690674 24.84311551467097 47 24.7567549973926 25.43984342882939 25.536143755656145 24.26725781812187 48 24.8499771808234 25.826425667858928 24.8017915707023 24.521805580615375 49 24.457529630942553 25.85991821994293 25.14443116585757 24.538120983256952 50 24.445582847350074 26.430531399872354 24.666911014472653 24.456974738304915 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 33.0 1 33.0 2 33.0 3 85.0 4 137.0 5 171.0 6 205.0 7 212.0 8 219.0 9 315.0 10 411.0 11 636.5 12 862.0 13 1517.0 14 2172.0 15 3134.0 16 4096.0 17 4561.0 18 5026.0 19 5103.5 20 5181.0 21 5478.0 22 5775.0 23 6497.0 24 7219.0 25 8086.0 26 8953.0 27 11723.5 28 14494.0 29 17923.5 30 21353.0 31 25092.0 32 28831.0 33 34353.5 34 39876.0 35 46788.0 36 53700.0 37 59703.0 38 65706.0 39 67721.5 40 69737.0 41 73449.5 42 77162.0 43 78010.5 44 78859.0 45 85114.5 46 91370.0 47 95599.5 48 99829.0 49 102116.5 50 104404.0 51 101939.0 52 99474.0 53 97925.0 54 96376.0 55 95337.0 56 94298.0 57 91273.5 58 88249.0 59 79425.5 60 70602.0 61 62394.5 62 54187.0 63 46871.0 64 39555.0 65 33545.5 66 27536.0 67 23656.0 68 19776.0 69 17166.5 70 14557.0 71 11510.0 72 8463.0 73 6995.0 74 5527.0 75 4371.0 76 3215.0 77 2789.5 78 2364.0 79 1916.0 80 1468.0 81 1183.5 82 899.0 83 735.0 84 571.0 85 414.5 86 258.0 87 176.0 88 94.0 89 77.0 90 60.0 91 56.0 92 52.0 93 45.0 94 38.0 95 30.5 96 23.0 97 19.0 98 15.0 99 12.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009835068031783543 2 2.830235404829797E-4 3 6.368029660867042E-4 4 0.0 5 0.0 6 7.075588512074492E-5 7 2.830235404829797E-4 8 0.0 9 0.0011320941619319188 10 0.0012736059321734085 11 0.0 12 7.075588512074492E-5 13 4.952911958452144E-4 14 1.4151177024148985E-4 15 0.00431610899236544 16 7.075588512074492E-4 17 0.0 18 3.537794256037246E-4 19 7.075588512074492E-5 20 8.490706214489391E-4 21 0.0 22 1.4151177024148985E-4 23 9.905823916904288E-4 24 7.075588512074492E-4 25 0.001768897128018623 26 0.005589714924538848 27 0.005872738465021828 28 0.004174597222123951 29 0.0023349442089845825 30 0.003537794256037246 31 0.008066170903764922 32 0.0033255266006750116 33 0.004174597222123951 34 0.002547211864346817 35 0.002830235404829797 36 0.0070048326269537475 37 0.0029717471750712867 38 0.00919826506569684 39 0.003962329566761715 40 0.0022641883238638375 41 0.0032547707155542666 42 0.0016981412428978783 43 9.905823916904288E-4 44 0.0010613382768111738 45 9.905823916904288E-4 46 6.368029660867042E-4 47 0.0016273853577771333 48 0.001768897128018623 49 4.952911958452144E-4 50 0.0016981412428978783 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1413310.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.279948332166505 #Duplication Level Percentage of deduplicated Percentage of total 1 72.75316159703308 38.762846908916835 2 15.143204210418432 16.136582758290807 3 5.385639373663665 8.60839762693445 4 2.484760226043907 5.295515858457669 5 1.304773993410182 3.4759145477024536 6 0.7475744141400456 2.389843569589877 7 0.4661964923741234 1.7387247518431386 8 0.3355279434928684 1.4301529194638491 9 0.2265085341542026 1.086152669687762 >10 1.01553891601188 9.381502150779209 >50 0.06710873521003181 2.5190858693091442 >100 0.06359289404137364 6.693641044824061 >500 0.005744683547185204 2.0793979341978663 >1k 6.679864589750236E-4 0.4022413900028118 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.075588512074492E-5 2 0.0 0.0 0.0 0.0 7.075588512074492E-5 3 0.0 0.0 0.0 7.075588512074492E-5 7.075588512074492E-5 4 0.0 0.0 0.0 7.075588512074492E-5 7.075588512074492E-5 5 0.0 0.0 0.0 7.075588512074492E-5 7.075588512074492E-5 6 0.0 0.0 0.0 7.075588512074492E-5 1.4151177024148985E-4 7 0.0 0.0 0.0 7.075588512074492E-5 1.4151177024148985E-4 8 0.0 0.0 0.0 7.075588512074492E-5 1.4151177024148985E-4 9 0.0 0.0 0.0 7.075588512074492E-5 1.4151177024148985E-4 10 0.0 0.0 0.0 1.4151177024148985E-4 2.1226765536223476E-4 11 0.0 0.0 0.0 1.4151177024148985E-4 2.1226765536223476E-4 12 0.0 0.0 0.0 1.4151177024148985E-4 3.537794256037246E-4 13 0.0 0.0 0.0 1.4151177024148985E-4 3.537794256037246E-4 14 0.0 0.0 0.0 1.4151177024148985E-4 3.537794256037246E-4 15 0.0 0.0 0.0 2.1226765536223476E-4 4.245353107244695E-4 16 0.0 0.0 0.0 2.1226765536223476E-4 5.660470809659594E-4 17 0.0 0.0 0.0 2.1226765536223476E-4 5.660470809659594E-4 18 0.0 0.0 0.0 2.1226765536223476E-4 6.368029660867042E-4 19 0.0 0.0 0.0 3.537794256037246E-4 7.075588512074492E-4 20 0.0 0.0 0.0 4.245353107244695E-4 7.783147363281941E-4 21 0.0 0.0 0.0 5.660470809659594E-4 7.783147363281941E-4 22 0.0 0.0 0.0 9.905823916904288E-4 8.49070621448939E-4 23 0.0 0.0 0.0 0.0019104088982601127 8.49070621448939E-4 24 0.0 0.0 0.0 0.003184014830433521 9.19826506569684E-4 25 0.0 0.0 0.0 0.003679306026278736 9.19826506569684E-4 26 0.0 0.0 0.0 0.004386864877486185 9.905823916904288E-4 27 0.0 0.0 0.0 0.004811400188210654 9.905823916904288E-4 28 0.0 0.0 0.0 0.005872738465021828 9.905823916904288E-4 29 0.0 0.0 0.0 0.00792465913352343 9.905823916904288E-4 30 7.075588512074492E-5 0.0 0.0 0.01308983874733781 9.905823916904288E-4 31 7.075588512074492E-5 0.0 0.0 0.02660421280540009 9.905823916904288E-4 32 7.075588512074492E-5 0.0 0.0 0.040613878059307586 9.905823916904288E-4 33 7.075588512074492E-5 0.0 0.0 0.053279181495920924 0.0010613382768111738 34 7.075588512074492E-5 0.0 0.0 0.06566146139205128 0.0011320941619319188 35 7.075588512074492E-5 0.0 0.0 0.08108624434837368 0.0011320941619319188 36 7.075588512074492E-5 0.0 0.0 0.10330359227628758 0.0011320941619319188 37 7.075588512074492E-5 0.0 0.0 0.1357805435467095 0.0011320941619319188 38 1.4151177024148985E-4 0.0 0.0 0.1803567511727788 0.0011320941619319188 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCCGT 55 0.0044847955 19.999372 44 TAGGACG 845 0.0 19.787062 4 GTATCAA 3930 0.0 19.595034 1 ATATCCG 70 8.125964E-4 18.856552 19 GTCCTAC 1195 0.0 18.780312 1 CCTAGTA 95 1.5978534E-5 18.525734 2 GATATAC 495 0.0 18.22423 1 TAACGGC 145 6.3064363E-9 18.207613 36 GTAGGAC 1105 0.0 18.11772 3 CTGTAGG 1155 0.0 18.097233 1 AGGACGT 920 0.0 17.934853 5 TAGGACC 1025 0.0 17.60007 4 CATACGG 75 0.0012912884 17.599447 16 AACGCAG 4380 0.0 17.52975 6 TCCTACA 1350 0.0 17.43649 2 GGACGTG 930 0.0 17.268887 6 TGTAGGA 1200 0.0 17.049465 2 ACCGTCG 340 0.0 16.823597 8 ATACCGT 385 0.0 16.571495 6 TTAGGAC 605 0.0 16.363703 3 >>END_MODULE