##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063902_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1808575 Sequences flagged as poor quality 0 Sequence length 25 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.264733284491935 32.0 32.0 32.0 32.0 32.0 2 30.840487123840592 32.0 32.0 32.0 32.0 32.0 3 30.85987255159449 32.0 32.0 32.0 32.0 32.0 4 30.904109589041095 32.0 32.0 32.0 32.0 32.0 5 30.784420330923517 32.0 32.0 32.0 32.0 32.0 6 34.445515944873726 36.0 36.0 36.0 32.0 36.0 7 34.3912461468283 36.0 36.0 36.0 32.0 36.0 8 34.35781374839307 36.0 36.0 36.0 32.0 36.0 9 34.51379843246755 36.0 36.0 36.0 32.0 36.0 10 34.203588460528316 36.0 36.0 36.0 32.0 36.0 11 34.47461067414954 36.0 36.0 36.0 32.0 36.0 12 34.30139806201014 36.0 36.0 36.0 32.0 36.0 13 34.37640849840344 36.0 36.0 36.0 32.0 36.0 14 34.290256693805894 36.0 36.0 36.0 32.0 36.0 15 34.22020541033687 36.0 36.0 36.0 32.0 36.0 16 34.21365826686756 36.0 36.0 36.0 32.0 36.0 17 34.16112187772141 36.0 36.0 36.0 32.0 36.0 18 34.151132244999516 36.0 36.0 36.0 32.0 36.0 19 34.16302724520686 36.0 36.0 36.0 32.0 36.0 20 34.14366061678393 36.0 36.0 36.0 32.0 36.0 21 34.13241364057338 36.0 36.0 36.0 32.0 36.0 22 34.11131526201567 36.0 36.0 36.0 32.0 36.0 23 34.05563440830488 36.0 36.0 36.0 32.0 36.0 24 34.031921816900045 36.0 36.0 36.0 32.0 36.0 25 33.63217671371107 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 3.0 4 11.0 5 15.0 6 89.0 7 29.0 8 122.0 9 113.0 10 143.0 11 49.0 12 102.0 13 110.0 14 140.0 15 252.0 16 479.0 17 690.0 18 838.0 19 1153.0 20 1725.0 21 2483.0 22 3882.0 23 6011.0 24 8906.0 25 13442.0 26 19324.0 27 26186.0 28 35901.0 29 48986.0 30 65259.0 31 89135.0 32 125879.0 33 178165.0 34 376228.0 35 802724.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.95806137575502 17.78525123348895 12.437883045334868 25.818804345421153 2 16.101340184010578 19.70480231221416 38.367626347607356 25.826231156167907 3 18.719008355855955 23.808604894965697 28.75427413754208 28.718112611636272 4 12.862242511304785 16.218290475226787 36.10061453360361 34.81885247986482 5 14.61739145821675 36.46907701053069 34.067488448530995 14.846043082721568 6 33.5128911687075 35.63197224401948 17.391616910842096 13.463519676430918 7 29.92730723753123 30.467580819817737 21.005354620558602 18.59975732209243 8 27.65810574012779 33.648191496893645 19.412369240844647 19.28133352213392 9 27.04778964127205 14.965815545006814 18.784771529236437 39.2016232844847 10 15.835832125430144 27.152372838222117 32.12836230456864 24.883432731779102 11 35.85880491488573 21.526026654569392 23.312458162062878 19.302710268481995 12 24.578925062437825 23.547552890951522 29.433694183572186 22.439827863038467 13 29.415276410713503 20.251565645919197 25.145332994725578 25.187824948641723 14 23.32698153441314 19.78186992976504 25.691145437383323 31.2000030984385 15 24.824520394472952 27.71319105381817 22.340004702692983 25.122283849015894 16 25.1521135441778 26.06996808063885 24.355374420358455 24.422543954824892 17 23.650271821218762 26.228174908350937 25.608513265738576 24.513040004691725 18 24.12401517071481 25.704611529876058 26.399622392187545 23.771750907221584 19 25.341727086453925 25.22270430169703 25.44359642477909 23.991972187069955 20 25.601411746737767 24.952645724723773 25.41658758147619 24.029354947062266 21 25.862765408817562 24.684154377018302 24.898241047536203 24.554839166627936 22 25.48790994866494 24.873018077666067 25.20298570066519 24.436086273003802 23 24.466897095949115 25.117566525110924 25.436647995475532 24.97888838346443 24 24.62129701104775 25.114447847583634 25.599907036197784 24.664348105170834 25 24.689909718975063 24.88983944198967 25.663494979622442 24.756755859412827 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 70.0 1 70.0 2 210.5 3 351.0 4 351.0 5 351.0 6 871.0 7 1391.0 8 1391.0 9 1391.0 10 1793.0 11 2195.0 12 2195.0 13 2195.0 14 3405.5 15 4616.0 16 4616.0 17 4616.0 18 8593.0 19 12570.0 20 12570.0 21 12570.0 22 19776.0 23 26982.0 24 26982.0 25 26982.0 26 40892.0 27 54802.0 28 54802.0 29 54802.0 30 70679.0 31 86556.0 32 86556.0 33 86556.0 34 104207.0 35 121858.0 36 121858.0 37 121858.0 38 141521.5 39 161185.0 40 161185.0 41 161185.0 42 180385.0 43 199585.0 44 199585.0 45 199585.0 46 217030.0 47 234475.0 48 234475.0 49 234475.0 50 240510.5 51 246546.0 52 246546.0 53 246546.0 54 229942.5 55 213339.0 56 213339.0 57 213339.0 58 193135.5 59 172932.0 60 172932.0 61 172932.0 62 147913.5 63 122895.0 64 122895.0 65 122895.0 66 99242.5 67 75590.0 68 75590.0 69 75590.0 70 56764.0 71 37938.0 72 37938.0 73 37938.0 74 27956.5 75 17975.0 76 17975.0 77 17975.0 78 13202.0 79 8429.0 80 8429.0 81 8429.0 82 5807.0 83 3185.0 84 3185.0 85 3185.0 86 2328.5 87 1472.0 88 1472.0 89 1472.0 90 1023.0 91 574.0 92 574.0 93 574.0 94 413.0 95 252.0 96 252.0 97 252.0 98 532.0 99 812.0 100 812.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03842804417842777 2 0.00508687779052569 3 0.0012717194476314225 4 0.0027093153449539 5 0.0081279460348617 6 0.013491284574872482 7 0.02305682650705666 8 0.03710103258089932 9 0.0487676762091702 10 0.057227375143414014 11 0.05556861064650346 12 0.06507886042879062 13 0.06491298397909957 14 0.06706937782508328 15 0.06082136488672021 16 0.06679291707559819 17 0.06286717443290989 18 0.07790663920489889 19 0.07508673956015094 20 0.08028420165047068 21 0.07536320030963603 22 0.07895719005294224 23 0.0836570227941888 24 0.07851485285376608 25 0.07962069585170646 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1808575.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.513994100093335 #Duplication Level Percentage of deduplicated Percentage of total 1 66.6328099201689 31.65990937419546 2 16.425713126077092 15.60902473124505 3 6.779091684014996 9.663051668348409 4 3.403640224138239 6.468821661141785 5 1.9250294309564497 4.5732918512485385 6 1.2137121310454382 3.4600986620222796 7 0.7918453560210897 2.6336614901920656 8 0.5420238667512141 2.0602975045541574 9 0.3817767785710627 1.63257656441203 >10 1.7723336120658881 14.289259080555228 >50 0.08480769417925026 2.7769088820244576 >100 0.04394418656275217 3.9631899315693144 >500 0.002921419149667577 0.8980341274836996 >1k 3.505702979601093E-4 0.3118744710075393 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2772 0.15326983951453493 No Hit TATCAACGCAGAGTACTTTTTTTTT 1837 0.10157167936082273 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.5292149897018373E-5 0.0 5 0.0 0.0 0.0 5.5292149897018373E-5 0.0 6 0.0 0.0 0.0 5.5292149897018373E-5 0.0 7 0.0 0.0 0.0 5.5292149897018373E-5 0.0 8 0.0 0.0 0.0 5.5292149897018373E-5 0.0 9 0.0 0.0 0.0 5.5292149897018373E-5 0.0 10 0.0 0.0 0.0 5.5292149897018373E-5 0.0 11 0.0 0.0 0.0 5.5292149897018373E-5 0.0 12 0.0 0.0 0.0 5.5292149897018373E-5 0.0 13 0.0 0.0 0.0 5.5292149897018373E-5 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATACGTT 40 0.005280869 14.24946 6 GGTATCA 625 0.0 13.677968 1 GTATCAA 1810 0.0 13.38199 1 CTATTAG 65 5.4610537E-5 13.151893 1 CGAACGA 75 1.4773708E-5 12.66794 16 ACCGTAT 55 0.0030677412 12.0914545 8 TTAGACC 55 0.0030728308 12.0887785 4 CCTACAC 185 0.0 11.808403 3 GTGTACG 70 0.0014934547 10.855531 1 GTCCTAC 630 0.0 10.704759 1 CCGATAA 90 9.511768E-5 10.556032 9 AATACTA 90 9.533137E-5 10.553696 5 CTAAGAC 210 0.0 10.402641 3 TTAAGGT 110 6.0585426E-6 10.36181 4 ATTACAC 220 0.0 10.361524 3 GTAGGAC 680 0.0 10.336128 3 GTTCTAA 120 1.5266487E-6 10.290137 1 TAGGACA 315 0.0 10.252161 4 GGACCGG 140 9.6933945E-8 10.178186 6 TAGGACG 450 0.0 10.131547 4 >>END_MODULE