##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063901_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1302252 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.97469767756164 32.0 32.0 32.0 32.0 32.0 2 30.713617640825277 32.0 32.0 32.0 32.0 32.0 3 31.11967192217789 32.0 32.0 32.0 32.0 32.0 4 31.32784130874823 32.0 32.0 32.0 32.0 32.0 5 31.158667446853606 32.0 32.0 32.0 32.0 32.0 6 34.75628065842863 36.0 36.0 36.0 32.0 36.0 7 34.802442230843184 36.0 36.0 36.0 32.0 36.0 8 34.70319799854406 36.0 36.0 36.0 32.0 36.0 9 34.93502409671861 36.0 36.0 36.0 32.0 36.0 10 34.6383726037664 36.0 36.0 36.0 32.0 36.0 11 34.948759533485074 36.0 36.0 36.0 36.0 36.0 12 34.78726928428599 36.0 36.0 36.0 32.0 36.0 13 34.878917444549906 36.0 36.0 36.0 32.0 36.0 14 34.79636199445269 36.0 36.0 36.0 32.0 36.0 15 34.73197660667828 36.0 36.0 36.0 32.0 36.0 16 34.767510435768195 36.0 36.0 36.0 32.0 36.0 17 34.71435943273652 36.0 36.0 36.0 32.0 36.0 18 34.7187871471881 36.0 36.0 36.0 32.0 36.0 19 34.71793324179959 36.0 36.0 36.0 32.0 36.0 20 34.71932621335963 36.0 36.0 36.0 32.0 36.0 21 34.71242278760179 36.0 36.0 36.0 32.0 36.0 22 34.69250882317708 36.0 36.0 36.0 32.0 36.0 23 34.62392916271198 36.0 36.0 36.0 32.0 36.0 24 34.60416109938783 36.0 36.0 36.0 32.0 36.0 25 34.57399105549464 36.0 36.0 36.0 32.0 36.0 26 34.4899957919051 36.0 36.0 36.0 32.0 36.0 27 34.48842927482546 36.0 36.0 36.0 32.0 36.0 28 34.45581730724929 36.0 36.0 36.0 32.0 36.0 29 34.42785190577553 36.0 36.0 36.0 32.0 36.0 30 34.402634820295916 36.0 36.0 36.0 32.0 36.0 31 34.403273713536244 36.0 36.0 36.0 32.0 36.0 32 34.35310677196119 36.0 36.0 36.0 32.0 36.0 33 34.31713216796749 36.0 36.0 36.0 32.0 36.0 34 34.30210665831191 36.0 36.0 36.0 32.0 36.0 35 34.25647263356094 36.0 36.0 36.0 32.0 36.0 36 34.22655830054398 36.0 36.0 36.0 32.0 36.0 37 34.21118032454548 36.0 36.0 36.0 32.0 36.0 38 34.149345134428664 36.0 36.0 36.0 32.0 36.0 39 34.152977303931955 36.0 36.0 36.0 32.0 36.0 40 34.12133673052527 36.0 36.0 36.0 32.0 36.0 41 34.09184167119728 36.0 36.0 36.0 32.0 36.0 42 34.01951772775162 36.0 36.0 36.0 32.0 36.0 43 34.01748279134914 36.0 36.0 36.0 32.0 36.0 44 33.9473105051864 36.0 36.0 36.0 32.0 36.0 45 33.89338699422232 36.0 36.0 36.0 32.0 36.0 46 33.879770582037885 36.0 36.0 36.0 32.0 36.0 47 33.86585622444811 36.0 36.0 36.0 32.0 36.0 48 33.78856319667776 36.0 36.0 36.0 32.0 36.0 49 33.76976115221939 36.0 36.0 36.0 32.0 36.0 50 33.0288016451501 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 2.0 18 0.0 19 1.0 20 7.0 21 27.0 22 121.0 23 388.0 24 895.0 25 2317.0 26 4894.0 27 9246.0 28 16476.0 29 26671.0 30 41290.0 31 63693.0 32 98353.0 33 165490.0 34 313551.0 35 558829.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.22127336705183 19.23873827519633 12.789961863189761 25.75002649456209 2 15.50549511306602 21.309381930323564 37.38473777652183 25.800385180088586 3 17.7731532852881 25.70637629631905 29.108040345710677 27.412430072682177 4 11.97510159324002 17.1909123579768 37.160549571050765 33.67343647773242 5 14.27711379978683 37.33808817341037 33.331106421798545 15.053691605004255 6 33.157151084661166 37.03520829333845 17.018160875407947 12.789479746592436 7 29.499282780905695 31.057122584568887 21.3351947242162 18.108399910309217 8 27.705697514766726 33.42148831408975 19.498376658281195 19.374437512862333 9 27.224719196033302 14.287963152806352 18.602211722389754 39.88510592877059 10 15.221973677845021 27.4106564873538 32.07451109580426 25.29285873899692 11 36.73735958938823 21.376738142847927 22.92505597994858 18.96084628781526 12 24.49671799313804 23.875486464985272 29.50166327254633 22.12613226933036 13 29.289966273705165 20.083808921188588 25.642197185175174 24.984027619931073 14 23.36114165658154 19.978683015831088 25.84730404654106 30.812871281046313 15 24.771249509477546 27.86735812093999 22.750949751302237 24.610442618280224 16 25.29180489003563 26.20807224474751 24.313183437768767 24.18693942744809 17 23.529009746193516 26.3945841511474 25.759837573680056 24.31656852897903 18 24.35590373898734 25.431349256019004 26.80750485121532 23.405242153778342 19 25.157976457687496 25.49831023358784 25.859684500146287 23.484028808578376 20 25.435191435085464 24.669128572777893 25.637611413538025 24.258068578598618 21 26.311343733778102 24.76824762027626 24.890574174583723 24.02983447136192 22 25.29441396723205 24.885659259987346 25.50044231206345 24.31948446071716 23 23.949468840756662 24.79354899151159 25.903247159138903 25.35373500859285 24 24.400209791230083 25.496315215162713 25.63791661643298 24.465558377174222 25 24.486572243877415 25.060588468378807 25.715926857662406 24.736912430081368 26 24.199773612841096 25.690411720527052 26.07760441224579 24.03221025438606 27 24.924089651772317 25.321726255842066 25.37732473041651 24.376859361969107 28 24.002580228995324 25.19163575767349 26.12981009207424 24.67597392125694 29 24.222639967809016 25.237132053680305 25.992452934509163 24.54777504400151 30 24.198920144277693 25.43489495941902 26.191377587810273 24.17480730849302 31 24.68112622018322 25.27206697174927 25.322060789718016 24.724746018349496 32 24.347824751443497 25.343970561019308 25.24444813046039 25.063756557076804 33 24.00770689235462 25.104072995850903 25.889813555560504 24.998406556233974 34 24.5258880192655 25.286356264360048 26.016798953175492 24.17095676319896 35 25.222985794182673 24.966729713188244 25.88777719159615 23.922507301032933 36 24.199760241018446 25.622033251391365 25.581254257411445 24.596952250178745 37 25.086813954738485 25.496425307746062 25.24331713010958 24.173443607405872 38 24.345239740860542 25.279613195346794 25.685094566242444 24.690052497550216 39 24.80575329631933 25.183726127122352 25.359504227428754 24.651016349129556 40 25.09447277625176 25.518515589063966 25.444258182329193 23.94275345235508 41 24.028406939857184 25.784335483256633 25.968252603060783 24.219004973825406 42 25.432697734744135 25.792924022278584 25.399908004456943 23.37447023852033 43 24.659239430087066 24.981762110342686 25.590638855996694 24.76835960357355 44 24.376631324971836 25.563510231224836 25.344502813999583 24.715355629803746 45 24.60164731792499 25.725405033488503 25.171742799703278 24.50120484888323 46 24.222784499076592 25.523461407031707 25.43085210540259 24.82290198848911 47 24.617768706103874 25.283093051722368 25.710823500140528 24.38831474203323 48 25.172223932964172 25.89997611787174 24.75348037864308 24.174319570521007 49 24.486366983734985 25.88503067399863 25.19414579306627 24.434456549200114 50 24.662734979727237 26.031760658557562 24.782605356923455 24.522899004791743 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 18.0 2 17.0 3 51.0 4 85.0 5 121.5 6 158.0 7 163.5 8 169.0 9 226.0 10 283.0 11 428.5 12 574.0 13 1089.0 14 1604.0 15 2259.0 16 2914.0 17 3281.0 18 3648.0 19 3840.5 20 4033.0 21 4580.0 22 5127.0 23 6057.0 24 6987.0 25 8032.5 26 9078.0 27 11384.5 28 13691.0 29 16623.0 30 19555.0 31 22454.0 32 25353.0 33 29282.0 34 33211.0 35 38597.0 36 43983.0 37 49888.5 38 55794.0 39 59976.0 40 64158.0 41 69370.0 42 74582.0 43 75833.5 44 77085.0 45 83093.5 46 89102.0 47 94176.5 48 99251.0 49 100907.0 50 102563.0 51 96948.0 52 91333.0 53 88631.0 54 85929.0 55 85424.5 56 84920.0 57 81263.5 58 77607.0 59 70572.0 60 63537.0 61 56174.5 62 48812.0 63 42354.0 64 35896.0 65 30532.5 66 25169.0 67 21557.5 68 17946.0 69 16360.0 70 14774.0 71 11397.0 72 8020.0 73 6802.0 74 5584.0 75 4434.5 76 3285.0 77 2854.5 78 2424.0 79 1996.0 80 1568.0 81 1263.0 82 958.0 83 819.0 84 680.0 85 516.0 86 352.0 87 249.0 88 146.0 89 128.5 90 111.0 91 83.0 92 55.0 93 48.5 94 42.0 95 40.0 96 38.0 97 30.0 98 22.0 99 21.0 100 20.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007525425186523038 2 3.071602116948179E-4 3 5.375303704659313E-4 4 0.0 5 0.0 6 1.5358010584740894E-4 7 0.0 8 0.0 9 6.911104763133403E-4 10 2.3037015877111342E-4 11 0.0 12 0.0 13 3.071602116948179E-4 14 3.071602116948179E-4 15 0.005298513651735609 16 9.214806350844537E-4 17 0.0 18 7.679005292370447E-5 19 7.679005292370447E-5 20 6.911104763133403E-4 21 0.0 22 3.071602116948179E-4 23 4.6074031754222684E-4 24 3.839502646185224E-4 25 0.0018429612701689074 26 0.00445382306957486 27 0.00445382306957486 28 0.003225182222795588 29 0.0018429612701689074 30 0.0031483921698718838 31 0.006987894816057108 32 0.0025340717464822477 33 0.0031483921698718838 34 0.002150121481863725 35 0.0029948120640244744 36 0.008523695874531197 37 0.003225182222795588 38 0.0073718450806756295 39 0.003225182222795588 40 0.0019197513230926118 41 0.0026876518523296566 42 0.001151850793855567 43 0.0013822209526266806 44 9.982706880081581E-4 45 0.0010750607409318626 46 5.375303704659313E-4 47 0.002303701587711134 48 0.001766171217245203 49 6.911104763133403E-4 50 9.214806350844537E-4 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1302252.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.31954052259762 #Duplication Level Percentage of deduplicated Percentage of total 1 76.43322480542366 44.57550551312719 2 14.083080652747851 16.426375856218776 3 4.6211361925461665 8.085076183249159 4 1.9602524222175615 4.5728408228814885 5 0.9551904021005612 2.785313268105 6 0.5258462647945484 1.840026752900536 7 0.3186542745667672 1.300863961480687 8 0.20927131820956804 0.9763685698032262 9 0.14954425391200607 0.784921695834858 >10 0.6239172519610028 6.341297820216588 >50 0.055554590952960684 2.3111464549320138 >100 0.056783007196246925 6.749700081968131 >500 0.0064856772839114825 2.5648648169482757 >1k 0.0010588860871692217 0.6856982023339915 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 7.679005292370447E-5 11 0.0 0.0 0.0 0.0 7.679005292370447E-5 12 0.0 0.0 0.0 7.679005292370447E-5 3.071602116948179E-4 13 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 14 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 15 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 16 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 17 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 18 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 19 0.0 0.0 0.0 7.679005292370447E-5 5.375303704659313E-4 20 0.0 0.0 0.0 7.679005292370447E-5 9.214806350844537E-4 21 0.0 0.0 0.0 1.5358010584740894E-4 9.214806350844537E-4 22 0.0 0.0 0.0 1.5358010584740894E-4 0.0010750607409318626 23 0.0 0.0 0.0 4.6074031754222684E-4 0.0010750607409318626 24 0.0 0.0 0.0 9.214806350844537E-4 0.0010750607409318626 25 0.0 0.0 0.0 0.0010750607409318626 0.0010750607409318626 26 0.0 0.0 0.0 0.001151850793855567 0.0015358010584740896 27 0.0 0.0 0.0 0.001305430899702976 0.0015358010584740896 28 0.0 0.0 0.0 0.0019965413760163163 0.0015358010584740896 29 0.0 0.0 0.0 0.0027644419052533613 0.0015358010584740896 30 0.0 0.0 0.0 0.004684193228345973 0.0015358010584740896 31 0.0 0.0 0.0 0.009061226244997129 0.0016893811643214985 32 0.0 0.0 0.0 0.014666900108427555 0.001766171217245203 33 0.0 0.0 0.0 0.020042203813086867 0.0018429612701689074 34 0.0 0.0 0.0 0.027030098629143975 0.0019197513230926118 35 0.0 0.0 0.0 0.034709103921514425 0.0019197513230926118 36 0.0 0.0 0.0 0.04676514223053602 0.0019197513230926118 37 0.0 0.0 0.0 0.06488759472053028 0.0019197513230926118 38 0.0 0.0 0.0 0.09053547239704758 0.0019197513230926118 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACG 300 0.0 21.998331 4 GATTTCG 110 5.2586984E-9 21.99833 41 GTTATAT 155 3.45608E-11 19.87251 1 GTATCAA 3170 0.0 19.086655 1 CGCGGGA 290 0.0 18.206215 44 AGGACGT 350 0.0 17.598665 5 GGACGTG 365 0.0 17.478125 6 ATTTCGT 155 1.4406396E-8 17.030964 42 TTAGGAC 350 0.0 16.970793 3 AATCACG 195 4.9112714E-11 16.923742 34 TATGGCG 365 0.0 16.876728 16 GCATTCG 425 0.0 16.564083 22 GACGTGA 215 1.2732926E-11 16.37085 7 AATAGCG 260 0.0 16.075703 5 GCCGCTA 440 0.0 16.00063 35 CGTATTG 445 0.0 15.821454 27 ATACCGT 380 0.0 15.630393 6 CGCTTCG 310 0.0 15.614716 32 CGTGAAA 240 3.6379788E-12 15.583346 9 CTATTAG 170 4.4863555E-8 15.530618 1 >>END_MODULE