##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063899_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1347000 Sequences flagged as poor quality 0 Sequence length 50 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.360415738678544 32.0 32.0 32.0 32.0 32.0 2 31.49727988121752 32.0 32.0 32.0 32.0 32.0 3 31.557640682999256 32.0 32.0 32.0 32.0 32.0 4 31.62440311804009 32.0 32.0 32.0 32.0 32.0 5 31.606479584261322 32.0 32.0 32.0 32.0 32.0 6 35.21101855976244 36.0 36.0 36.0 36.0 36.0 7 35.22321455085375 36.0 36.0 36.0 36.0 36.0 8 35.174740905716405 36.0 36.0 36.0 36.0 36.0 9 35.27262583518931 36.0 36.0 36.0 36.0 36.0 10 35.171728285077954 36.0 36.0 36.0 36.0 36.0 11 35.27386265775798 36.0 36.0 36.0 36.0 36.0 12 35.21948329621381 36.0 36.0 36.0 36.0 36.0 13 35.240802524127695 36.0 36.0 36.0 36.0 36.0 14 35.197521900519675 36.0 36.0 36.0 36.0 36.0 15 35.18156347438753 36.0 36.0 36.0 36.0 36.0 16 35.21220267260579 36.0 36.0 36.0 36.0 36.0 17 35.20477728285078 36.0 36.0 36.0 36.0 36.0 18 35.18890794357832 36.0 36.0 36.0 36.0 36.0 19 35.16221677802524 36.0 36.0 36.0 36.0 36.0 20 35.149970304380105 36.0 36.0 36.0 36.0 36.0 21 35.12972383073497 36.0 36.0 36.0 36.0 36.0 22 35.10030512249443 36.0 36.0 36.0 36.0 36.0 23 35.084995545657016 36.0 36.0 36.0 36.0 36.0 24 35.0725152190052 36.0 36.0 36.0 36.0 36.0 25 35.034052709725316 36.0 36.0 36.0 36.0 36.0 26 34.993704528582036 36.0 36.0 36.0 36.0 36.0 27 34.940424647364516 36.0 36.0 36.0 36.0 36.0 28 34.896544914625096 36.0 36.0 36.0 36.0 36.0 29 34.878533036377135 36.0 36.0 36.0 36.0 36.0 30 34.8225991091314 36.0 36.0 36.0 36.0 36.0 31 34.81429621380846 36.0 36.0 36.0 36.0 36.0 32 34.779375649591685 36.0 36.0 36.0 32.0 36.0 33 34.808612472160355 36.0 36.0 36.0 36.0 36.0 34 34.77927765404603 36.0 36.0 36.0 36.0 36.0 35 34.764017817371936 36.0 36.0 36.0 36.0 36.0 36 34.69916035634744 36.0 36.0 36.0 32.0 36.0 37 34.622633259094286 36.0 36.0 36.0 32.0 36.0 38 34.58444394951744 36.0 36.0 36.0 32.0 36.0 39 34.4431700074239 36.0 36.0 36.0 32.0 36.0 40 34.512053452115815 36.0 36.0 36.0 32.0 36.0 41 34.485780252412766 36.0 36.0 36.0 32.0 36.0 42 34.47211135857461 36.0 36.0 36.0 32.0 36.0 43 34.46497624350408 36.0 36.0 36.0 32.0 36.0 44 34.36451150705271 36.0 36.0 36.0 32.0 36.0 45 34.32573793615442 36.0 36.0 36.0 32.0 36.0 46 34.1857713437268 36.0 36.0 36.0 32.0 36.0 47 34.2008292501856 36.0 36.0 36.0 32.0 36.0 48 34.14854491462509 36.0 36.0 36.0 32.0 36.0 49 34.09302227171492 36.0 36.0 36.0 32.0 36.0 50 33.64786340014848 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 6.0 20 13.0 21 35.0 22 99.0 23 344.0 24 897.0 25 2006.0 26 4164.0 27 8004.0 28 14230.0 29 21434.0 30 31977.0 31 45420.0 32 65687.0 33 104686.0 34 218199.0 35 829798.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.58066204612866 22.10745535067953 13.914105510121502 24.397777093070307 2 11.156001089831676 22.84147626163978 46.56446896318255 19.438053685345995 3 16.67009405394089 29.954424410520318 31.183606744801196 22.191874790737593 4 9.830141054194506 19.556124721603563 41.620415738678545 28.993318485523385 5 9.740237564959168 42.357089829250185 36.41974758723088 11.482925018559763 6 26.992285055040995 41.312297883586886 20.572444164644885 11.122972896727235 7 25.483334050978545 33.6837916611606 24.274052374242576 16.55882191361828 8 22.983090559087273 41.62074359372204 21.009072761004276 14.387093086186404 9 27.07445852864709 15.21843712369467 21.892859423093768 35.81424492456447 10 14.211240973345618 31.32533966649913 35.60839297897598 18.85502638117927 11 31.743207126948775 22.726503340757237 28.751373422420194 16.778916109873794 12 24.33730413853621 25.926616075153785 34.124029879777105 15.6120499065329 13 28.9175749854862 24.809687348273265 27.155874487933872 19.11686317830666 14 19.00596734367831 25.568189410823177 29.59766829646369 25.828174949034814 15 19.646587860060613 38.17499996287844 23.935093687403764 18.24331848965719 16 17.90004536036247 30.049124307437836 33.031846537950145 19.018983794249554 17 18.089086859688198 32.79354120267261 30.342538975501114 18.774832962138085 18 18.038758895733757 28.97741192611103 36.05086585389393 16.93296332426128 19 22.937210792287154 27.082351211842028 29.683169772212153 20.297268223658666 20 23.965582521028367 28.976161664154894 30.450188939784262 16.608066875032478 21 21.661618411284337 27.642093541202673 28.206236080178176 22.490051967334818 22 22.599976094972742 32.094280833587604 28.52003382338639 16.785709248053262 23 18.559872664425626 32.32877403874708 30.667219998337035 18.444133298490264 24 21.92873767163204 28.58065545900319 31.771387421631115 17.719219447733657 25 19.944408726523303 30.585519839284203 31.254055386369746 18.21601604782275 26 17.251701649976837 32.02658197023152 32.10141893256358 18.62029744722806 27 18.605652583219246 31.582108567372767 30.546935090621297 19.265303758786686 28 17.784847247485057 31.960800326663946 29.516314636771966 20.73803778907903 29 20.232536903224943 29.761041271179963 28.936152205433086 21.07026962016201 30 18.35626527053202 29.814685992203167 31.012942506702146 20.816106230562667 31 21.58192727969269 28.462247775284837 30.327103289445358 19.62872165557712 32 19.08274930213221 31.45111955811605 30.413152580626 19.052978559125737 33 17.737355199240945 32.18086666265757 32.20091214362662 17.88086599447487 34 19.263606464880436 31.35340801948076 31.9895023645664 17.393483151072406 35 18.33769747201668 32.16428365144402 31.250450086602232 18.247568789937066 36 17.652762578198434 30.80665590610694 32.84601460842501 18.694566907269614 37 18.285601014435514 30.723349537772577 29.21119917799839 21.779850269793517 38 19.174409669504016 32.89331546534117 29.27393339594555 18.658341469209265 39 21.32887588180181 29.297350028731405 30.10086431796686 19.272909771499926 40 22.136961405457253 28.94917363164061 31.069920963816784 17.84394399908536 41 21.734885768609143 28.00270832297048 31.95479595147291 18.307609956947466 42 19.694621012010554 31.709926339030513 31.22157534399123 17.373877304967696 43 17.759029776063333 32.2801687914072 31.612531069319104 18.34827036321036 44 17.467193471656763 31.830201902318358 30.777928236925646 19.924676389099236 45 17.956695880058053 32.12931101682647 30.320604906513438 19.593388196602042 46 18.937779790495846 29.229170223980876 30.921461926220683 20.911588059302595 47 21.47945278703105 29.3311437291523 30.011485028259706 19.17791845555695 48 17.94408842272811 30.601551317610305 30.19790880960724 21.256451450054346 49 20.66738084791577 29.294942750429286 29.84891577338331 20.18876062827163 50 18.40278963552702 32.94510856089076 29.12843934532356 19.523662458258663 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 25.0 1 22.0 2 19.0 3 56.5 4 94.0 5 125.5 6 157.0 7 197.5 8 238.0 9 294.0 10 350.0 11 536.0 12 722.0 13 1414.0 14 2106.0 15 2994.5 16 3883.0 17 4282.0 18 4681.0 19 5066.5 20 5452.0 21 6495.5 22 7539.0 23 9693.5 24 11848.0 25 15289.5 26 18731.0 27 26306.5 28 33882.0 29 45007.5 30 56133.0 31 71202.0 32 86271.0 33 106824.5 34 127378.0 35 147356.0 36 167334.0 37 165613.0 38 163892.0 39 152238.0 40 140584.0 41 127692.5 42 114801.0 43 104442.0 44 94083.0 45 86162.5 46 78242.0 47 71396.5 48 64551.0 49 57675.5 50 50800.0 51 44441.0 52 38082.0 53 32299.0 54 26516.0 55 22114.5 56 17713.0 57 14767.5 58 11822.0 59 9704.0 60 7586.0 61 6079.0 62 4572.0 63 3612.0 64 2652.0 65 2144.5 66 1637.0 67 1402.0 68 1167.0 69 909.5 70 652.0 71 479.5 72 307.0 73 253.0 74 199.0 75 163.5 76 128.0 77 99.5 78 71.0 79 54.0 80 37.0 81 29.0 82 21.0 83 17.0 84 13.0 85 9.5 86 6.0 87 6.0 88 6.0 89 6.5 90 7.0 91 5.5 92 4.0 93 2.5 94 1.0 95 2.5 96 4.0 97 2.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008537490720118782 2 2.2271714922048998E-4 3 5.196733481811432E-4 4 0.0 5 0.0 6 2.969561989606533E-4 7 1.4847809948032666E-4 8 7.423904974016333E-5 9 0.001633259094283593 10 0.0012620638455827764 11 0.0 12 1.4847809948032666E-4 13 4.4543429844097997E-4 14 1.4847809948032666E-4 15 0.005493689680772086 16 6.681514476614699E-4 17 0.0 18 4.4543429844097997E-4 19 7.423904974016333E-5 20 7.423904974016332E-4 21 0.0 22 2.2271714922048998E-4 23 5.939123979213066E-4 24 3.711952487008166E-4 25 0.0019302152932442465 26 0.005345211581291759 27 0.005642167780252413 28 0.0037119524870081666 29 0.0023014105419450633 30 0.003192279138827023 31 0.006384558277654046 32 0.002969561989606533 33 0.004677060133630289 34 0.0022271714922048997 35 0.002746844840386043 36 0.007869339272457313 37 0.003266518188567186 38 0.006310319227913883 39 0.00311804008908686 40 0.001633259094283593 41 0.003043801039346696 42 0.0013363028953229399 43 8.908685968819599E-4 44 8.908685968819599E-4 45 0.0011135857461024498 46 7.423904974016332E-4 47 0.0021529324424647365 48 0.0011878247958426132 49 2.2271714922048998E-4 50 0.0010393466963622864 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1347000.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 71.53618713056832 #Duplication Level Percentage of deduplicated Percentage of total 1 83.43884192087766 59.68896609609813 2 11.574085485534932 16.559318903168435 3 2.725744672619053 5.849681429118789 4 0.9303558475667366 2.6621644003821032 5 0.40671439242685997 1.4547398442671629 6 0.217502695980597 0.933558813664266 7 0.13669527372317306 0.6845061076647616 8 0.09405634237231443 0.538274568701015 9 0.06885189782971592 0.4432862022697196 >10 0.35755938172058677 4.672484680420457 >50 0.02783242804761893 1.3904978560151313 >100 0.018412070703709114 2.5002074148111766 >500 0.002406080741580538 1.18928709388689 >1k 9.4150985540108E-4 1.4330265895318437 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 3461 0.25694135115070527 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 3077 0.22843355605048254 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 3005 0.2230883444691908 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 2589 0.19220489977728286 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 1993 0.14795842613214552 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 1613 0.11974758723088344 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 1.4847809948032666E-4 0.0 15 0.0 0.0 0.0 2.2271714922048998E-4 0.0 16 0.0 0.0 0.0 2.969561989606533E-4 0.0 17 0.0 0.0 0.0 2.969561989606533E-4 0.0 18 0.0 0.0 0.0 2.969561989606533E-4 0.0 19 0.0 0.0 0.0 4.4543429844097997E-4 0.0 20 0.0 0.0 0.0 5.939123979213066E-4 0.0 21 0.0 0.0 0.0 7.423904974016332E-4 0.0 22 0.0 0.0 0.0 9.651076466221232E-4 0.0 23 0.0 0.0 0.0 0.0017817371937639199 0.0 24 0.0 0.0 0.0 0.0026726057906458797 0.0 25 0.0 0.0 0.0 0.003192279138827023 0.0 26 0.0 0.0 0.0 0.0032665181885671865 0.0 27 0.0 0.0 0.0 0.003637713437268003 0.0 28 0.0 0.0 0.0 0.005716406829992576 0.0 29 0.0 0.0 0.0 0.008314773570898293 0.0 30 0.0 0.0 0.0 0.014179658500371195 0.0 31 0.0 0.0 0.0 0.030883444691907944 0.0 32 0.0 0.0 0.0 0.052264291017074985 0.0 33 0.0 0.0 0.0 0.07401633259094284 0.0 34 0.0 0.0 0.0 0.09970304380103935 0.0 35 0.0 0.0 0.0 0.12962138084632516 0.0 36 7.423904974016333E-5 0.0 0.0 0.17082405345211582 0.0 37 7.423904974016333E-5 0.0 0.0 0.2315515961395694 0.0 38 7.423904974016333E-5 0.0 0.0 0.3149220489977728 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGAGC 40 7.034946E-4 27.4984 19 GTATCAA 3470 0.0 26.75746 1 TGTACGA 60 9.758462E-6 25.665174 2 TAGGACC 1630 0.0 24.428024 4 CTGTACG 55 1.592774E-4 24.002167 1 GTACGAC 55 1.5943791E-4 23.998604 3 TGCGAGG 65 1.8144085E-5 23.690928 19 CGGACAT 95 2.6864655E-8 23.157408 10 GGTATCA 1370 0.0 22.001986 1 TATCCGT 80 3.617879E-6 21.99872 6 ATCCGTA 70 3.2171512E-5 21.998718 7 AGGACCT 2985 0.0 21.151196 5 GCGGACA 105 7.7494406E-8 20.951939 9 GGACCTG 3010 0.0 20.098497 6 GTCACGG 55 0.0044834563 20.00032 35 TACGGCG 55 0.004485383 19.998837 16 AGCGGAC 110 1.2666715E-7 19.998837 8 GTCCTAC 4595 0.0 19.392391 1 GACCTGG 3095 0.0 19.333284 7 TGTAGGA 5070 0.0 19.30854 2 >>END_MODULE