##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063897_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1495955 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.00003141805736 32.0 32.0 32.0 32.0 32.0 2 30.741901327245806 32.0 32.0 32.0 32.0 32.0 3 31.113767459582675 32.0 32.0 32.0 32.0 32.0 4 31.329061368824597 32.0 32.0 32.0 32.0 32.0 5 31.14198354897039 32.0 32.0 32.0 32.0 32.0 6 34.76054827852442 36.0 36.0 36.0 32.0 36.0 7 34.801160462714456 36.0 36.0 36.0 32.0 36.0 8 34.71249736790211 36.0 36.0 36.0 32.0 36.0 9 34.9315741449442 36.0 36.0 36.0 32.0 36.0 10 34.63226835031802 36.0 36.0 36.0 32.0 36.0 11 34.95105601438546 36.0 36.0 36.0 36.0 36.0 12 34.7812701585275 36.0 36.0 36.0 32.0 36.0 13 34.873668659819316 36.0 36.0 36.0 32.0 36.0 14 34.79304257146772 36.0 36.0 36.0 32.0 36.0 15 34.71843270686618 36.0 36.0 36.0 32.0 36.0 16 34.74982803627115 36.0 36.0 36.0 32.0 36.0 17 34.69643204508157 36.0 36.0 36.0 32.0 36.0 18 34.69397007262919 36.0 36.0 36.0 32.0 36.0 19 34.707193063962485 36.0 36.0 36.0 32.0 36.0 20 34.69228085069404 36.0 36.0 36.0 32.0 36.0 21 34.685900979641765 36.0 36.0 36.0 32.0 36.0 22 34.66760230087135 36.0 36.0 36.0 32.0 36.0 23 34.59528461751857 36.0 36.0 36.0 32.0 36.0 24 34.56636864076794 36.0 36.0 36.0 32.0 36.0 25 34.52463677049109 36.0 36.0 36.0 32.0 36.0 26 34.4501532465883 36.0 36.0 36.0 32.0 36.0 27 34.43923914823641 36.0 36.0 36.0 32.0 36.0 28 34.404051592461 36.0 36.0 36.0 32.0 36.0 29 34.36725102025128 36.0 36.0 36.0 32.0 36.0 30 34.3440644939186 36.0 36.0 36.0 32.0 36.0 31 34.33917865176426 36.0 36.0 36.0 32.0 36.0 32 34.28421376311453 36.0 36.0 36.0 32.0 36.0 33 34.25018199076844 36.0 36.0 36.0 32.0 36.0 34 34.229824426536894 36.0 36.0 36.0 32.0 36.0 35 34.186308411683505 36.0 36.0 36.0 32.0 36.0 36 34.13543254977589 36.0 36.0 36.0 32.0 36.0 37 34.12592290543499 36.0 36.0 36.0 32.0 36.0 38 34.05966088552129 36.0 36.0 36.0 32.0 36.0 39 34.04756092262134 36.0 36.0 36.0 32.0 36.0 40 34.018281298568475 36.0 36.0 36.0 32.0 36.0 41 34.003293548268495 36.0 36.0 36.0 32.0 36.0 42 33.89768475656019 36.0 36.0 36.0 32.0 36.0 43 33.91532365612602 36.0 36.0 36.0 32.0 36.0 44 33.81938494139195 36.0 36.0 36.0 32.0 36.0 45 33.76518210775057 36.0 36.0 36.0 32.0 36.0 46 33.743287732585536 36.0 36.0 36.0 32.0 36.0 47 33.70440086767316 36.0 36.0 36.0 27.0 36.0 48 33.65511395730486 36.0 36.0 36.0 27.0 36.0 49 33.6334789482304 36.0 36.0 36.0 27.0 36.0 50 32.87492203976724 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 3.0 19 4.0 20 12.0 21 57.0 22 171.0 23 479.0 24 1336.0 25 3157.0 26 6379.0 27 12182.0 28 20760.0 29 32563.0 30 49761.0 31 75068.0 32 114209.0 33 190747.0 34 360634.0 35 628431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.70218993131646 18.52998236449474 12.590199793294229 26.177627910894568 2 15.843711353989104 20.710852635449044 36.649754336709115 26.795681673852734 3 18.297086675125037 25.17403610004051 28.340777858142697 28.188099366691755 4 12.472099762359163 16.568680207626567 35.73623538141187 35.2229846486024 5 14.910074166669451 36.62075396652974 32.51682035890117 15.952351507899637 6 34.43822692053416 35.66453714058816 16.577748870116736 13.31948706876094 7 30.200681438521134 30.15315320735344 20.88434596541469 18.76181938871074 8 28.58194263864889 32.66014017801338 18.928644243977928 19.829272939359807 9 27.745902762597872 13.927164531898523 17.876435461951527 40.45049724355208 10 15.874637186101637 26.82155639307836 31.077726067652172 26.22608035316783 11 37.65902049192656 20.647479369366057 22.25013452944774 19.443365609259637 12 25.37760210380941 23.151061564099944 28.612596786128975 22.85873954596167 13 30.092830580680786 19.363201067414643 24.919933874839483 25.624034477065088 14 24.074419450343694 19.387173260122477 24.826181036436303 31.712226253097526 15 25.373490528702686 27.052894334335193 22.154532959686822 25.419082177275303 16 25.848964530662993 25.284102303568325 23.86198644330655 25.00494672246213 17 24.182946679545843 25.614473697404 24.992797243232584 25.209782379817575 18 25.27905344429961 24.476620207894648 26.29573180921822 23.94859453858752 19 26.07245944728247 24.40101767835107 25.03225366555389 24.494269208812568 20 26.181214608349674 23.79963354120723 24.921203337836637 25.09794851260646 21 27.109237911568197 23.841225170543233 24.226062949754503 24.823473968134067 22 26.1179328494946 24.100890870234558 24.60224351968277 25.17893276058807 23 24.565007403347046 23.908231920291186 25.467313303630817 26.059447372730947 24 25.271950752397636 24.749406899022762 24.90582913477781 25.072813213801787 25 25.353926988562296 24.16550239650251 25.12731210684992 25.35325850808527 26 24.748141898893095 25.063206857225367 25.427740958177182 24.760910285704355 27 25.50788407761941 24.61983483781603 24.61716079614243 25.255120288422134 28 24.62667809350128 24.631090170827612 25.313825712249667 25.428406023421445 29 24.899610474603307 24.318363979964207 25.35197333017809 25.430052215254396 30 24.665117541436647 24.65148024798482 25.6849731733046 24.99842903727393 31 25.406045744533635 24.459480328299556 24.582555893755234 25.551918033411575 32 24.99473560714995 24.7260677358565 24.47110399833144 25.80809265866211 33 24.52828927357384 24.34879686606925 25.266848721659752 25.85606513869716 34 25.255010124197735 24.4641929620615 25.38763744876902 24.893159464971745 35 25.8699536670916 24.275943855023655 25.28114937165464 24.57295310623011 36 24.89530937883565 25.013571006447233 24.746897387146717 25.344222227570402 37 25.589781094114954 24.785512877249325 24.576340302187187 25.04836572644853 38 24.990323052928055 24.649507328072907 24.952083234446857 25.40808638455218 39 25.547850745809686 24.19019835001347 24.708618475544007 25.553332428632835 40 25.932425124221965 24.62967382417804 24.91812681369413 24.519774237905864 41 24.80222634905228 24.81566305814151 25.421651953135964 24.960458639670247 42 26.124286896544348 25.287213404941156 24.651018833819318 23.93748086469518 43 25.15426744771351 24.328165348767097 25.026254377679336 25.49131282584006 44 24.94560258299993 24.80883193454261 24.7005384592245 25.545027023232965 45 25.180038384123332 25.089325644030374 24.559220980112052 25.171414991734242 46 24.874961395458904 24.760584997506584 24.84113646421175 25.523317142822766 47 25.496614810338464 24.457594215764395 25.05441438357996 24.99137659031718 48 25.809998876951294 25.336780914589475 24.002291554138967 24.850928654320263 49 25.144524126571582 25.147866497676386 24.48915200034226 25.218457375409777 50 25.360077008950952 25.382537952979085 23.97318056326165 25.284204474808313 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 22.0 1 22.0 2 22.0 3 78.0 4 134.0 5 161.5 6 189.0 7 188.5 8 188.0 9 261.0 10 334.0 11 534.5 12 735.0 13 1272.0 14 1809.0 15 2679.0 16 3549.0 17 3973.0 18 4397.0 19 4635.0 20 4873.0 21 5284.0 22 5695.0 23 6351.0 24 7007.0 25 7458.5 26 7910.0 27 10215.0 28 12520.0 29 14635.0 30 16750.0 31 19965.0 32 23180.0 33 27507.0 34 31834.0 35 36987.5 36 42141.0 37 48021.5 38 53902.0 39 57866.5 40 61831.0 41 67295.5 42 72760.0 43 74390.5 44 76021.0 45 84420.0 46 92819.0 47 100685.5 48 108552.0 49 112077.0 50 115602.0 51 111221.5 52 106841.0 53 106367.5 54 105894.0 55 107761.0 56 109628.0 57 107694.5 58 105761.0 59 97117.5 60 88474.0 61 78946.0 62 69418.0 63 59733.0 64 50048.0 65 42657.5 66 35267.0 67 30460.0 68 25653.0 69 23142.5 70 20632.0 71 16161.0 72 11690.0 73 9857.0 74 8024.0 75 6397.5 76 4771.0 77 4112.5 78 3454.0 79 2874.5 80 2295.0 81 1846.0 82 1397.0 83 1156.0 84 915.0 85 672.0 86 429.0 87 326.0 88 223.0 89 174.0 90 125.0 91 102.0 92 79.0 93 68.5 94 58.0 95 49.5 96 41.0 97 35.5 98 30.0 99 31.0 100 32.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007286315430611216 2 3.3423465278033097E-4 3 6.68469305560662E-5 4 0.0 5 0.0 6 2.673877222242648E-4 7 1.336938611121324E-4 8 0.0 9 5.347754444485295E-4 10 6.016223750045957E-4 11 0.0 12 1.336938611121324E-4 13 2.673877222242648E-4 14 1.336938611121324E-4 15 0.004478744347256434 16 0.001002703958340993 17 0.0 18 3.3423465278033097E-4 19 6.68469305560662E-5 20 0.001069550888897059 21 0.0 22 1.336938611121324E-4 23 6.684693055606619E-4 24 2.673877222242648E-4 25 0.0016711732639016548 26 0.004879825930592832 27 0.00614991761115809 28 0.004077662763920038 29 0.002139101777794118 30 0.003810275041695773 31 0.008422713250064339 32 0.003743428111139707 33 0.004679285138924634 34 0.0022727956389062506 35 0.00280757108335478 36 0.007954784736171876 37 0.004077662763920038 38 0.008823794833400737 39 0.004278203555588236 40 0.0029412649444669125 41 0.003542887319471508 42 0.0019385609861259194 43 9.358570277849267E-4 44 0.0013369386111213239 45 0.0016043263333455886 46 0.0011363978194531253 47 0.0018048671250137872 48 0.0018048671250137872 49 7.353162361167281E-4 50 0.0016711732639016548 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1495955.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.39627160559689 #Duplication Level Percentage of deduplicated Percentage of total 1 72.56676521693176 36.57094409412073 2 14.65760970793511 14.773777598598627 3 5.619110120102081 8.495465993832678 4 2.584161244336232 5.209283677689039 5 1.383069423196425 3.4850771150401623 6 0.8440333244133147 2.5521679596784965 7 0.5013620443436464 1.7686744431635801 8 0.3535965484445419 1.4255958155370185 9 0.24014253058938145 1.0892059376074044 >10 1.0859925600417282 9.533340727764866 >50 0.07880845999627963 2.7675473196965736 >100 0.07363177089739703 7.633808499465091 >500 0.008920934860668089 2.9319447202115567 >1k 0.0027961139115526847 1.7631660975941514 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 1657 0.11076536393140168 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 1533 0.10247634454244947 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 1511 0.10100571207021602 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 1497 0.10006985504243109 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.347754444485295E-4 2 0.0 0.0 0.0 0.0 5.347754444485295E-4 3 0.0 0.0 0.0 0.0 5.347754444485295E-4 4 0.0 0.0 0.0 0.0 5.347754444485295E-4 5 0.0 0.0 0.0 0.0 5.347754444485295E-4 6 0.0 0.0 0.0 0.0 7.353162361167281E-4 7 0.0 0.0 0.0 0.0 7.353162361167281E-4 8 0.0 0.0 0.0 0.0 7.353162361167281E-4 9 0.0 0.0 0.0 0.0 7.353162361167281E-4 10 0.0 0.0 0.0 6.68469305560662E-5 7.353162361167281E-4 11 0.0 0.0 0.0 6.68469305560662E-5 7.353162361167281E-4 12 0.0 0.0 0.0 6.68469305560662E-5 0.0012032447500091915 13 0.0 0.0 0.0 6.68469305560662E-5 0.0016711732639016548 14 0.0 0.0 0.0 6.68469305560662E-5 0.001738020194457721 15 0.0 0.0 0.0 6.68469305560662E-5 0.002005407916681986 16 0.0 0.0 0.0 6.68469305560662E-5 0.002139101777794118 17 0.0 0.0 0.0 6.68469305560662E-5 0.0022727956389062506 18 0.0 0.0 0.0 2.0054079166819858E-4 0.002473336430574449 19 0.0 0.0 0.0 2.0054079166819858E-4 0.002473336430574449 20 0.0 0.0 0.0 2.0054079166819858E-4 0.00280757108335478 21 0.0 0.0 0.0 4.0108158333639716E-4 0.0029412649444669125 22 0.0 0.0 0.0 8.690100972288605E-4 0.003074958805579045 23 0.0 0.0 0.0 0.0018717140555698534 0.003074958805579045 24 0.0 0.0 0.0 0.0032754995972472433 0.003074958805579045 25 0.0 0.0 0.0 0.0038771219722518392 0.003074958805579045 26 0.0 0.0 0.0 0.004679285138924633 0.003476040388915442 27 0.0 0.0 0.0 0.0054814483055974274 0.0036765811805836404 28 0.0 0.0 0.0 0.007420009291723348 0.0036765811805836404 29 0.0 0.0 0.0 0.010829202750082723 0.0036765811805836404 30 0.0 0.0 0.0 0.01804867125013787 0.0036765811805836404 31 0.0 0.0 0.0 0.03161859815301931 0.003743428111139707 32 0.0 0.0 0.0 0.04431951495867188 0.003743428111139707 33 0.0 0.0 0.0 0.059226380472674645 0.003943968902807906 34 0.0 0.0 0.0 0.07379901133389707 0.004478744347256435 35 0.0 0.0 0.0 0.09351885584793661 0.004478744347256435 36 0.0 0.0 0.0 0.11865330173701749 0.004478744347256435 37 0.0 0.0 0.0 0.15615442977897062 0.004478744347256435 38 0.0 0.0 0.0 0.2016771894876517 0.005013519791704965 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGCGCTA 60 2.8733662E-4 21.999834 12 TATATGA 110 1.2666897E-7 19.99918 2 GATATAC 270 0.0 19.557367 1 TCCCCGC 455 0.0 18.375328 1 ATAGACT 150 9.606083E-9 17.599277 4 CGTCTTA 140 8.376628E-8 17.285583 15 CGCCCCT 470 0.0 16.850372 5 ATAGCGT 410 0.0 16.633465 6 GTAGGAC 675 0.0 16.62154 3 GATTTCG 305 0.0 16.590036 41 GCATACG 120 6.40904E-6 16.499876 37 CTAGACC 80 0.0019891928 16.499323 3 AATAGCG 430 0.0 16.37142 5 CTAGAAC 175 3.6288839E-9 16.342188 3 GAATTAG 95 3.344615E-4 16.212029 1 GTATCAA 4330 0.0 16.107729 1 TAGCGTA 405 0.0 15.7524395 7 CCAATAG 455 0.0 15.471891 3 CGTCGTA 400 0.0 15.399883 10 TACGCTA 530 0.0 15.358375 9 >>END_MODULE