##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063895_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1830247 Sequences flagged as poor quality 0 Sequence length 50 %GC 38 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.39391568460432 32.0 32.0 32.0 32.0 32.0 2 31.523881202919608 32.0 32.0 32.0 32.0 32.0 3 31.58383103482754 32.0 32.0 32.0 32.0 32.0 4 31.64491841811515 32.0 32.0 32.0 32.0 32.0 5 31.631363963443185 32.0 32.0 32.0 32.0 32.0 6 35.24553899009259 36.0 36.0 36.0 36.0 36.0 7 35.26903855053444 36.0 36.0 36.0 36.0 36.0 8 35.20153290785342 36.0 36.0 36.0 36.0 36.0 9 35.30169698406827 36.0 36.0 36.0 36.0 36.0 10 35.19840983211556 36.0 36.0 36.0 36.0 36.0 11 35.29086128812122 36.0 36.0 36.0 36.0 36.0 12 35.2548404668878 36.0 36.0 36.0 36.0 36.0 13 35.26074185615384 36.0 36.0 36.0 36.0 36.0 14 35.21605280598739 36.0 36.0 36.0 36.0 36.0 15 35.186984051879335 36.0 36.0 36.0 36.0 36.0 16 35.22161489678715 36.0 36.0 36.0 36.0 36.0 17 35.23565398550032 36.0 36.0 36.0 36.0 36.0 18 35.21764767269117 36.0 36.0 36.0 36.0 36.0 19 35.15546043785347 36.0 36.0 36.0 36.0 36.0 20 35.13221767335229 36.0 36.0 36.0 36.0 36.0 21 35.09527457222987 36.0 36.0 36.0 36.0 36.0 22 35.03488873359716 36.0 36.0 36.0 36.0 36.0 23 35.05546355218722 36.0 36.0 36.0 36.0 36.0 24 35.033352875322294 36.0 36.0 36.0 36.0 36.0 25 34.9551836446119 36.0 36.0 36.0 36.0 36.0 26 34.9314076187531 36.0 36.0 36.0 36.0 36.0 27 34.80934540529229 36.0 36.0 36.0 36.0 36.0 28 34.72675873802825 36.0 36.0 36.0 32.0 36.0 29 34.68594730656572 36.0 36.0 36.0 32.0 36.0 30 34.58359718660924 36.0 36.0 36.0 32.0 36.0 31 34.58049432672202 36.0 36.0 36.0 32.0 36.0 32 34.539852271305456 36.0 36.0 36.0 32.0 36.0 33 34.641364253021585 36.0 36.0 36.0 32.0 36.0 34 34.592011351473325 36.0 36.0 36.0 32.0 36.0 35 34.57049075889757 36.0 36.0 36.0 32.0 36.0 36 34.449446987209924 36.0 36.0 36.0 32.0 36.0 37 34.271285788202356 36.0 36.0 36.0 32.0 36.0 38 34.22525757452409 36.0 36.0 36.0 32.0 36.0 39 33.89338105731085 36.0 36.0 36.0 32.0 36.0 40 34.08582502798802 36.0 36.0 36.0 32.0 36.0 41 34.067172900706844 36.0 36.0 36.0 32.0 36.0 42 34.081712468317114 36.0 36.0 36.0 32.0 36.0 43 34.11337977879489 36.0 36.0 36.0 32.0 36.0 44 33.90765945798572 36.0 36.0 36.0 32.0 36.0 45 33.87209540570207 36.0 36.0 36.0 32.0 36.0 46 33.60106313519432 36.0 36.0 36.0 21.0 36.0 47 33.649446222285846 36.0 36.0 36.0 27.0 36.0 48 33.58683117633849 36.0 36.0 36.0 21.0 36.0 49 33.51107528109594 36.0 36.0 36.0 21.0 36.0 50 33.14973771299721 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 5.0 20 10.0 21 30.0 22 114.0 23 409.0 24 1148.0 25 3011.0 26 6608.0 27 13347.0 28 23161.0 29 35559.0 30 50550.0 31 71601.0 32 102957.0 33 166614.0 34 333743.0 35 1021379.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.316578383984314 21.55060963681885 13.294366555816985 26.83844542337985 2 9.875338480939071 20.620455504098924 51.28327712928824 18.22092888567376 3 18.557129119678294 27.401652242328872 30.819728560188832 23.221490077804006 4 9.84801504933487 18.80287196209036 41.71874069456199 29.630372294012773 5 8.800232974019353 42.61818213607235 37.793314235728836 10.788270654179463 6 28.692084098260338 40.705863711862925 19.432478800594456 11.169573389282279 7 26.110916237489384 31.94679840851995 23.723696158877004 18.218589195113662 8 20.40096227449082 48.04876063176172 19.30651983038355 12.243757263363907 9 26.278707504588226 14.71451355487598 21.729435747587594 37.277343192948194 10 15.761214319316675 29.632225947928863 36.17392815208168 18.43263158067278 11 32.10852530206322 18.819492024569374 33.152592602305916 15.919390071061484 12 28.26712081401213 22.50280427243814 35.62592508207926 13.604149831470465 13 31.81139679407114 24.291593315390273 26.182881533181003 17.714128357357584 14 16.735728647609058 28.669955852784334 27.2901914503016 27.304124049305013 15 17.372598431392262 45.68408847760685 21.058837542988094 15.884475548012794 16 15.503271987774234 27.653910731584446 38.827351490220096 18.01546579042122 17 16.518917938398477 34.69575417962712 32.22346492030857 16.56186296166583 18 16.738187341550834 26.521439811172304 42.485466386921935 14.254906460354928 19 25.416146244821736 24.199260645836677 28.054152283354263 22.330440825987328 20 24.86664280816398 30.081874731933333 30.729496485424 14.321985974478688 21 19.370390990942752 26.483146810239273 27.254299556289396 26.89216264252858 22 23.51810823141164 35.4780370933946 26.934317536723224 14.069537138470533 23 16.072626699507605 35.73009163845537 31.916703638219335 16.280578023817693 24 24.933492365213105 27.493592373900487 32.740824842192914 14.832090418693495 25 19.464924790051416 32.275859054425446 32.85551931199152 15.403696843531616 26 13.8003405211416 34.79730468118216 34.67031958280696 16.732035214869278 27 16.477663286571527 34.124863533986186 31.48635667708125 17.91111650236104 28 15.25682572830626 34.443776018743606 28.747368415301082 21.55202983764905 29 19.96688877414702 29.321957496332356 27.36812197607359 23.34303175344704 30 15.779005838814623 29.95733720329194 32.00436463140502 22.259292326488417 31 23.28529768061728 26.58899873722678 30.580039659056695 19.545663923099244 32 17.784540907066773 33.587915975707375 30.841035195895493 17.786507921330358 33 14.851512739071019 34.89001216835496 35.176490322961364 15.08198476961266 34 18.11414012432596 33.00353132927801 34.047194032966 14.835134513430035 35 15.971253132202154 34.898605712437345 32.71248433215931 16.41765682320119 36 14.571969999158508 31.816060701105197 35.787358162093284 17.82461113764301 37 16.19399861652801 32.09649553212857 27.947281630529925 23.762224220813494 38 18.469554916118515 36.70950263430819 28.011804935516547 16.809137514056747 39 22.818568619297842 28.780496600576015 29.359133585369175 19.041801194756967 40 24.391852426170193 28.383024922562644 32.31562423334421 14.90949841792296 41 23.735341589725152 25.994192914568963 34.024777917776305 16.24568757792958 42 19.031531900710846 34.642964468558255 32.127460783188816 14.198042847542085 43 14.691919045665077 35.91989365195493 33.32604822269709 16.0621390796829 44 14.458558078136885 34.67335145861927 31.401893975819352 19.46619648742449 45 15.225530017669989 35.177645116275514 30.77675822932956 18.820066636724945 46 18.01642859016164 28.33150477755728 31.946144297091507 21.705922335189573 47 23.79144619944006 28.641069520119068 29.8788550347393 17.688629245701573 48 15.86280978550096 31.691252080353273 29.777163157612918 22.66877497653285 49 21.243334207535625 28.81731357636157 29.856302998513858 20.08304921758895 50 16.273135816634568 36.99976778811349 27.857831687360846 18.869264707891105 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 24.0 1 18.0 2 12.0 3 50.5 4 89.0 5 98.0 6 107.0 7 134.0 8 161.0 9 206.5 10 252.0 11 405.5 12 559.0 13 1072.0 14 1585.0 15 2323.0 16 3061.0 17 3659.5 18 4258.0 19 4671.5 20 5085.0 21 5991.0 22 6897.0 23 8398.5 24 9900.0 25 14630.5 26 19361.0 27 32941.5 28 46522.0 29 65723.0 30 84924.0 31 112912.0 32 140900.0 33 185782.0 34 230664.0 35 273253.5 36 315843.0 37 302172.5 38 288502.0 39 246319.0 40 204136.0 41 167748.0 42 131360.0 43 105318.0 44 79276.0 45 69120.0 46 58964.0 47 53315.0 48 47666.0 49 42572.0 50 37478.0 51 34459.0 52 31440.0 53 27775.0 54 24110.0 55 21201.5 56 18293.0 57 16124.0 58 13955.0 59 11552.5 60 9150.0 61 7589.0 62 6028.0 63 4874.5 64 3721.0 65 3064.5 66 2408.0 67 1867.0 68 1326.0 69 1077.0 70 828.0 71 709.5 72 591.0 73 483.0 74 375.0 75 303.5 76 232.0 77 166.5 78 101.0 79 73.0 80 45.0 81 33.0 82 21.0 83 15.0 84 9.0 85 8.5 86 8.0 87 6.0 88 4.0 89 5.5 90 7.0 91 4.0 92 1.0 93 1.5 94 2.0 95 3.0 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0077038782197157 2 6.010117760061892E-4 3 3.82462039276666E-4 4 0.0 5 0.0 6 3.82462039276666E-4 7 5.463743418238084E-5 8 0.0 9 0.001092748683647617 10 0.001092748683647617 11 5.463743418238084E-5 12 2.1854973672952337E-4 13 7.10286644370951E-4 14 3.82462039276666E-4 15 0.004862731642231896 16 7.64924078553332E-4 17 0.0 18 3.82462039276666E-4 19 5.463743418238084E-5 20 6.556492101885701E-4 21 0.0 22 1.0927486836476169E-4 23 6.010117760061892E-4 24 3.2782460509428506E-4 25 0.0020215850647480912 26 0.006064755194244274 27 0.006611129536068083 28 0.004152444997860945 29 0.002841146577483804 30 0.004425632168772849 31 0.008086340258992365 32 0.003387520919307613 33 0.004917369076414276 34 0.003168971182578089 35 0.003551433221854755 36 0.00901517664009284 37 0.003769982958584278 38 0.00901517664009284 39 0.004589544471319991 40 0.003168971182578089 41 0.003769982958584278 42 0.0020215850647480912 43 0.0016391230254714255 44 0.0012566609861947595 45 0.0013659358545595212 46 0.0012566609861947595 47 0.0023494096698423767 48 0.0015844855912890445 49 3.82462039276666E-4 50 0.0012020235520123785 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1830247.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.20802877055728 #Duplication Level Percentage of deduplicated Percentage of total 1 77.95006261650877 39.13718986516414 2 12.724487931819478 12.777429123428027 3 3.952378160335891 5.953233491588001 4 1.7412490467127335 3.496987289362335 5 0.902757894610794 2.2662847172733227 6 0.5637478317122105 1.6982800412367574 7 0.375246115673283 1.3188257440234838 8 0.2750263787208055 1.1046825868381107 9 0.19727392725688192 0.8914261513854916 >10 1.11822789213191 10.624392930051982 >50 0.11003643888579981 3.867536989866955 >100 0.07668849236447835 7.667412000355883 >500 0.007887552779747349 2.6423232819483755 >1k 0.004272424422363147 3.978280613239884 >5k 5.477467208157881E-4 1.986142666760113 >10k+ 1.0954934416315761E-4 0.5895725074771989 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 10719 0.5856586570009403 No Hit GTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAGTTTTCTCGCCA 8857 0.48392375455334713 No Hit CTTTAGGACGTGAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTA 8730 0.4769848004121848 No Hit GTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGC 7627 0.41671971050901874 No Hit CTGAAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 5762 0.31482089575887845 No Hit ATTTAGAAATGTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAA 5134 0.2805085870923433 No Hit TTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATATTTCACGTCCT 3651 0.19948127219987247 No Hit GTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATTTCGTCA 3498 0.1911217447699682 No Hit GTCCTACAGTGTGCATTTCTCATTTTTCACGTTTTTCAGTGATTTCGTCA 3206 0.175167613988713 No Hit CTGTAGGACCTGGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGA 2902 0.15855783399726922 No Hit GAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGAAACATCCACTTG 2562 0.13998110637525973 No Hit GGAATATGGCGAGAAAACTGAAAATCACGGAAAATGAGAAATACACACTT 2555 0.13959864433598307 No Hit GATATACACTGTTCTACAAATCCCGTTTCCAACGAATGTGTTTTTCAGTG 2375 0.1297639061831545 No Hit CTGTAGGACATGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 2339 0.1277969585525888 No Hit GCCATATTCCACGTCCTACAGTGGACATTTCTAAATTTTCCACCTTTTTC 2334 0.1275237713816769 No Hit CCATATTTCACGTCCTAAAGTGTGTATTTCTCATTTTCCGTGATTTTCAG 2214 0.12096727927979119 No Hit GTCCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAA 2163 0.11818077013648978 No Hit ATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGAT 2002 0.10938414323312647 No Hit ACAGTGGACATTTCTAAATTTTCCACCTTTTTCAGTTTTCCTCGCCATAT 1976 0.10796356994438455 No Hit GAAATATGGCGAGGAAAACTGAAAAAGGTGGAAAATTTAGAAATGTCCAC 1932 0.1055595228403598 No Hit CCACTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATG 1876 0.10249982652614648 No Hit TTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAGTGATT 1873 0.10233591422359933 No Hit CCATATTCCAGGTCCTTCAGTGTGCATTTCTCATTTTTCACGTTTTTTAG 1861 0.10168026501341076 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 5.463743418238085E-5 0.0 11 0.0 0.0 0.0 5.463743418238085E-5 0.0 12 0.0 0.0 0.0 5.463743418238085E-5 0.0 13 0.0 0.0 0.0 5.463743418238085E-5 0.0 14 0.0 0.0 0.0 5.463743418238085E-5 0.0 15 0.0 0.0 0.0 1.092748683647617E-4 0.0 16 0.0 0.0 0.0 1.092748683647617E-4 0.0 17 0.0 0.0 0.0 1.092748683647617E-4 0.0 18 0.0 0.0 0.0 1.092748683647617E-4 0.0 19 0.0 0.0 0.0 1.092748683647617E-4 0.0 20 0.0 0.0 0.0 1.092748683647617E-4 0.0 21 0.0 0.0 0.0 3.278246050942851E-4 0.0 22 0.0 0.0 0.0 4.370994734590468E-4 0.0 23 0.0 0.0 0.0 0.0010381112494652362 0.0 24 0.0 0.0 0.0 0.0017483978938361872 0.0 25 0.0 0.0 0.0 0.0020762224989304724 0.0 26 0.0 0.0 0.0 0.0024040471040247574 0.0 27 0.0 0.0 0.0 0.0031689711825780894 0.0 28 0.0 0.0 0.0 0.004753456773867134 0.0 29 0.0 0.0 0.0 0.006665766970250463 0.0 30 0.0 0.0 0.0 0.011255311441570454 0.0 31 0.0 0.0 0.0 0.023275546961694243 0.0 32 0.0 0.0 0.0 0.03775446702002517 0.0 33 0.0 0.0 0.0 0.051741650170714665 0.0 34 0.0 0.0 0.0 0.06709476917596369 0.0 35 0.0 0.0 0.0 0.08496121015360222 0.0 36 0.0 0.0 0.0 0.10911095606221455 0.0 37 0.0 0.0 0.0 0.15189206702701877 0.0 38 0.0 0.0 0.0 0.2011203952253439 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGGACC 4490 0.0 27.632582 4 TATAGGA 770 0.0 25.140892 2 GACCGGG 80 1.3115823E-7 24.748064 7 GTATCAA 3370 0.0 24.611368 1 GCGAGGG 45 0.0013984578 24.444536 20 ATAGGAC 780 0.0 24.254513 3 TACGACT 65 1.8151499E-5 23.690454 4 GTCCTAT 665 0.0 23.48881 1 AGGACCG 85 2.3558096E-7 23.292295 5 ACTGTTC 1890 0.0 22.347458 8 AGGACCT 8815 0.0 22.310223 5 GGACCTG 8590 0.0 22.22876 6 TCCTATA 720 0.0 21.692747 2 CGGTAGG 155 1.8189894E-12 21.290401 1 CTAGGAC 820 0.0 21.193464 3 GACCTAG 315 0.0 20.950743 7 TGTAGGA 14425 0.0 20.862146 2 TTAGGAC 8665 0.0 20.817759 3 GATATAC 2250 0.0 20.728966 1 CGAGGAG 85 6.1146166E-6 20.706526 21 >>END_MODULE