##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063894_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1611726 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.233759336264352 32.0 32.0 32.0 32.0 32.0 2 30.795158110001328 32.0 32.0 32.0 32.0 32.0 3 30.80677546927952 32.0 32.0 32.0 32.0 32.0 4 30.84462681622062 32.0 32.0 32.0 32.0 32.0 5 30.67343146415706 32.0 32.0 32.0 32.0 32.0 6 34.367123816331066 36.0 36.0 36.0 32.0 36.0 7 34.31115772780237 36.0 36.0 36.0 32.0 36.0 8 34.25696241172507 36.0 36.0 36.0 32.0 36.0 9 34.44092544266209 36.0 36.0 36.0 32.0 36.0 10 34.075306224507145 36.0 36.0 36.0 32.0 36.0 11 34.41219847542324 36.0 36.0 36.0 32.0 36.0 12 34.20472276305029 36.0 36.0 36.0 32.0 36.0 13 34.29304857029048 36.0 36.0 36.0 32.0 36.0 14 34.19231618773911 36.0 36.0 36.0 32.0 36.0 15 34.11642177392435 36.0 36.0 36.0 32.0 36.0 16 34.11598869783077 36.0 36.0 36.0 32.0 36.0 17 34.02583503647642 36.0 36.0 36.0 32.0 36.0 18 34.027262078045524 36.0 36.0 36.0 32.0 36.0 19 34.04699185841762 36.0 36.0 36.0 32.0 36.0 20 34.03109399488498 36.0 36.0 36.0 32.0 36.0 21 34.02360016528864 36.0 36.0 36.0 32.0 36.0 22 33.99430176096929 36.0 36.0 36.0 32.0 36.0 23 33.93616222608558 36.0 36.0 36.0 32.0 36.0 24 33.922386931773765 36.0 36.0 36.0 32.0 36.0 25 33.4839687391033 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 15.0 5 24.0 6 65.0 7 29.0 8 78.0 9 116.0 10 138.0 11 42.0 12 97.0 13 83.0 14 148.0 15 260.0 16 402.0 17 593.0 18 771.0 19 1120.0 20 1554.0 21 2203.0 22 3568.0 23 5450.0 24 8387.0 25 12370.0 26 18023.0 27 24195.0 28 34032.0 29 46747.0 30 62798.0 31 85965.0 32 121672.0 33 168871.0 34 344447.0 35 667456.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.65761009224994 17.42960216205748 11.792312877624518 26.120474868068065 2 16.64620075538758 19.70398784331075 37.61189806797247 26.0379133333292 3 18.63966986350412 24.00544271038539 28.59110614464133 28.763781281469157 4 12.813776637198012 15.778615287629618 35.96406429163543 35.44354378353694 5 14.72091707186311 36.577821296578975 33.75621445999042 14.945047171567497 6 33.93175387212073 35.359474285146945 17.279338760921366 13.42943308181096 7 30.207705631305593 30.286768935940728 21.076576596144765 18.428948836608917 8 28.01301920730307 32.775246127319605 19.540169244729565 19.671565420647756 9 27.40388614448333 14.52617517322034 18.398104477222812 39.671834205073516 10 15.759188338354587 26.776441052657063 31.96789955916835 25.496471049819995 11 36.53589959114855 21.178393572601863 22.94596530784292 19.33974152840667 12 24.846544448562668 23.30798453120858 29.0241611396593 22.82130988056946 13 29.36527793730075 19.76885897790098 25.250682154708652 25.615180930089622 14 23.674379649100587 19.34634289897129 25.47233713363644 31.506940318291683 15 25.182736421259133 27.15239106277044 22.23492820293148 25.429944313038945 16 25.75775825245612 25.695051506451964 23.638642752838567 24.908547488253348 17 24.228562630414714 25.727575188098296 25.2107899103945 24.833072271092494 18 24.644564477000465 25.28679177566565 25.750998609739028 24.317645137594855 19 25.554738021837466 24.95791771057444 25.3412064934944 24.146137774093702 20 25.8296925877815 24.49282075609944 24.869727956206734 24.807758699912323 21 26.45790723983305 24.35410744820752 24.5367766034465 24.65120870851293 22 25.81943495808755 24.263893200869298 24.786898478733313 25.129773362309844 23 24.741421759629816 24.344387655306836 25.08219798179505 25.8319926032683 24 24.796946608491453 24.79024077062495 25.108581796009656 25.30423082487394 25 24.939784995644153 24.509726609288293 25.1941813584654 25.356307036602153 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 109.0 1 109.0 2 254.0 3 399.0 4 399.0 5 399.0 6 975.5 7 1552.0 8 1552.0 9 1552.0 10 1812.5 11 2073.0 12 2073.0 13 2073.0 14 2938.5 15 3804.0 16 3804.0 17 3804.0 18 6452.0 19 9100.0 20 9100.0 21 9100.0 22 15214.5 23 21329.0 24 21329.0 25 21329.0 26 32162.5 27 42996.0 28 42996.0 29 42996.0 30 54935.0 31 66874.0 32 66874.0 33 66874.0 34 84350.5 35 101827.0 36 101827.0 37 101827.0 38 119435.5 39 137044.0 40 137044.0 41 137044.0 42 156441.5 43 175839.0 44 175839.0 45 175839.0 46 193884.5 47 211930.0 48 211930.0 49 211930.0 50 217212.5 51 222495.0 52 222495.0 53 222495.0 54 209463.0 55 196431.0 56 196431.0 57 196431.0 58 178043.5 59 159656.0 60 159656.0 61 159656.0 62 137423.0 63 115190.0 64 115190.0 65 115190.0 66 93392.0 67 71594.0 68 71594.0 69 71594.0 70 53751.5 71 35909.0 72 35909.0 73 35909.0 74 26949.5 75 17990.0 76 17990.0 77 17990.0 78 13883.0 79 9776.0 80 9776.0 81 9776.0 82 6811.5 83 3847.0 84 3847.0 85 3847.0 86 2907.5 87 1968.0 88 1968.0 89 1968.0 90 1410.0 91 852.0 92 852.0 93 852.0 94 590.5 95 329.0 96 329.0 97 329.0 98 571.0 99 813.0 100 813.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04144625078952626 2 0.006390664418145516 3 0.0017993132827788345 4 0.004343169992914429 5 0.010051336269316247 6 0.012781328836291033 7 0.02227425753508971 8 0.03524172222821993 9 0.047898960493284834 10 0.056275074051048375 11 0.05410348905459117 12 0.061983240327450194 13 0.0633482366109376 14 0.06607822917791237 15 0.058074387333827214 16 0.06539573103616868 17 0.061983240327450194 18 0.07675001830335926 19 0.07389593516515834 20 0.07755660701632908 21 0.07222071245360563 22 0.07606752016161555 23 0.07972819201278629 24 0.07377184459393223 25 0.07737047115948989 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 1611726.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.6496648256924 #Duplication Level Percentage of deduplicated Percentage of total 1 80.42045074794585 47.970529322460735 2 11.583686196289039 13.819259981092818 3 3.3380235623754646 5.973359600278805 4 1.4606925286716324 3.485192789946238 5 0.7924881630038824 2.363582665075513 6 0.509813022808594 1.824610556058342 7 0.3523924418591385 1.4714063730803437 8 0.23795133304788768 1.135497380890656 9 0.18223557257238995 0.9783261740935082 >10 1.007067484853582 10.541878613241309 >50 0.061160146359325054 2.5134834233569854 >100 0.04933544327185144 5.7917251349630945 >500 0.004285280768884234 1.7485351315056692 >1k 4.180761725740716E-4 0.38261285395601125 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 2395 0.14859845904328653 No Hit TATCAACGCAGAGTACTTTTTTTTT 1663 0.10318130997452421 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.204528561306326E-5 2 0.0 0.0 0.0 0.0 6.204528561306326E-5 3 0.0 0.0 0.0 0.0 6.204528561306326E-5 4 0.0 0.0 0.0 0.0 6.204528561306326E-5 5 0.0 0.0 0.0 0.0 1.2409057122612653E-4 6 0.0 0.0 0.0 0.0 1.8613585683918978E-4 7 0.0 0.0 0.0 0.0 1.8613585683918978E-4 8 0.0 0.0 0.0 0.0 1.8613585683918978E-4 9 0.0 0.0 0.0 0.0 1.8613585683918978E-4 10 0.0 0.0 0.0 0.0 2.4818114245225305E-4 11 0.0 0.0 0.0 0.0 2.4818114245225305E-4 12 0.0 0.0 0.0 0.0 4.963622849045061E-4 13 0.0 0.0 0.0 0.0 6.204528561306326E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCG 110 1.8553692E-10 13.818317 7 TATAACG 55 1.968852E-4 13.811027 2 CGTTATT 90 5.439415E-7 12.660109 2 GTATCAA 1730 0.0 12.627437 1 CTATACT 175 0.0 11.940008 4 GGTATCA 595 0.0 11.333782 1 TAGAACC 220 0.0 11.224594 4 TAGGACG 170 1.0913936E-11 11.173804 4 CGGTCCA 205 0.0 11.122407 10 GCGTTAT 95 1.3633009E-5 10.997718 1 CCGATAA 70 0.0014905587 10.8579235 9 GTTATTC 140 8.403731E-9 10.852531 3 TCGCACG 160 5.4205884E-10 10.69026 18 TAACGAA 80 3.7683302E-4 10.688269 13 CTAGGAC 170 1.4006218E-10 10.613138 3 CGCGGTC 135 5.682159E-8 10.555987 10 AGAACCG 190 9.094947E-12 10.498147 5 ATTTGCG 100 2.3933364E-5 10.452048 16 TATGGGT 100 2.4048453E-5 10.447507 4 TGTAGGA 275 0.0 10.358271 2 >>END_MODULE