##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063894_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1611726 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.227170747385102 32.0 32.0 32.0 32.0 32.0 2 31.21769395046056 32.0 32.0 32.0 32.0 32.0 3 31.36682599896012 32.0 32.0 32.0 32.0 32.0 4 31.486865013035715 32.0 32.0 32.0 32.0 32.0 5 31.38442142150713 32.0 32.0 32.0 32.0 32.0 6 34.99620655123762 36.0 36.0 36.0 36.0 36.0 7 35.014815793751545 36.0 36.0 36.0 36.0 36.0 8 34.94437143782504 36.0 36.0 36.0 36.0 36.0 9 35.10929773423026 36.0 36.0 36.0 36.0 36.0 10 34.89340123569391 36.0 36.0 36.0 32.0 36.0 11 35.10977424202377 36.0 36.0 36.0 36.0 36.0 12 34.994508992223246 36.0 36.0 36.0 36.0 36.0 13 35.05788142649557 36.0 36.0 36.0 36.0 36.0 14 34.99164063866935 36.0 36.0 36.0 36.0 36.0 15 34.94718270971617 36.0 36.0 36.0 36.0 36.0 16 34.97772698337062 36.0 36.0 36.0 36.0 36.0 17 34.93413892932173 36.0 36.0 36.0 36.0 36.0 18 34.93870794415428 36.0 36.0 36.0 36.0 36.0 19 34.932640535674174 36.0 36.0 36.0 36.0 36.0 20 34.93410108169751 36.0 36.0 36.0 36.0 36.0 21 34.931880480925415 36.0 36.0 36.0 36.0 36.0 22 34.91047113467177 36.0 36.0 36.0 32.0 36.0 23 34.852556824174826 36.0 36.0 36.0 32.0 36.0 24 34.82903359504035 36.0 36.0 36.0 32.0 36.0 25 34.80249868774221 36.0 36.0 36.0 32.0 36.0 26 34.745503888378046 36.0 36.0 36.0 32.0 36.0 27 34.736498635624166 36.0 36.0 36.0 32.0 36.0 28 34.72119144321057 36.0 36.0 36.0 32.0 36.0 29 34.692502323595946 36.0 36.0 36.0 32.0 36.0 30 34.677880111135515 36.0 36.0 36.0 32.0 36.0 31 34.66903617612423 36.0 36.0 36.0 32.0 36.0 32 34.62167887097435 36.0 36.0 36.0 32.0 36.0 33 34.606510039547665 36.0 36.0 36.0 32.0 36.0 34 34.60136090129464 36.0 36.0 36.0 32.0 36.0 35 34.561868456549064 36.0 36.0 36.0 32.0 36.0 36 34.54507900226217 36.0 36.0 36.0 32.0 36.0 37 34.534793755266094 36.0 36.0 36.0 32.0 36.0 38 34.50182785411416 36.0 36.0 36.0 32.0 36.0 39 34.494221722550854 36.0 36.0 36.0 32.0 36.0 40 34.485951085978634 36.0 36.0 36.0 32.0 36.0 41 34.47103167660012 36.0 36.0 36.0 32.0 36.0 42 34.4109600515224 36.0 36.0 36.0 32.0 36.0 43 34.40053582308656 36.0 36.0 36.0 32.0 36.0 44 34.34816587931199 36.0 36.0 36.0 32.0 36.0 45 34.31806957261966 36.0 36.0 36.0 32.0 36.0 46 34.30906804258292 36.0 36.0 36.0 32.0 36.0 47 34.27899779491055 36.0 36.0 36.0 32.0 36.0 48 34.24149886519172 36.0 36.0 36.0 32.0 36.0 49 34.230131548414555 36.0 36.0 36.0 32.0 36.0 50 33.595611164676875 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 3.0 19 4.0 20 14.0 21 46.0 22 140.0 23 432.0 24 1115.0 25 2760.0 26 5711.0 27 10533.0 28 17489.0 29 27804.0 30 41501.0 31 61055.0 32 91609.0 33 151303.0 34 313571.0 35 886634.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.58770209829783 18.55786079851476 12.47586237707807 26.37857472610934 2 15.88794324568985 20.685739883937586 36.98001946989519 26.44629740047738 3 17.896076370490693 24.72188131700132 28.9115616713056 28.47048064120239 4 12.503924364315026 16.57049647396642 36.193869181238 34.73170998048055 5 14.447182709716166 37.04202823556857 33.36938164427452 15.141407410440733 6 34.0379829536465 35.746341027583526 16.949562672990336 13.26611334577964 7 30.08482831449018 30.647020647430146 20.985887179334455 18.28226385874522 8 28.03511765344584 33.07865795963952 19.313344398082798 19.572879988831843 9 27.47296656714492 14.336716080083987 18.210556750974742 39.97976060179636 10 15.58046638836908 27.085866883745403 32.00457404089088 25.329092686994635 11 36.82735154734738 21.136843359231037 22.858537989707926 19.177267103713657 12 24.865128809354957 23.464577970283976 28.908379417555004 22.761913802806067 13 29.502504786829427 19.758716496847455 25.161349966557346 25.57742874976578 14 23.67792272254882 19.26525927189812 25.413206347236656 31.643611658316402 15 25.211864143862854 27.171537670183156 22.192032245294563 25.424565940659427 16 25.815888600237386 25.779901955005524 23.574603107632957 24.829606337124133 17 24.231863376196312 25.92135755169151 25.114271975678232 24.732507096433945 18 24.77907183802676 25.256325063301823 25.762615536292525 24.201987562378896 19 25.682452878069 24.97085417283243 25.228528723608214 24.11816422549036 20 25.999429181247365 24.4255205618842 24.788486833941377 24.78656342292706 21 26.533542301855277 24.38330088364896 24.49008082018904 24.593075994306723 22 25.77413998922892 24.359381631098127 24.78836326815261 25.078115111520333 23 24.790533816131376 24.242050088228943 25.139726850139848 25.82768924549983 24 24.960228823865187 24.81293276747822 25.006328642692278 25.220509765964312 25 25.043106523836556 24.42072215448857 25.188790752650142 25.34738056902473 26 25.070906341580248 24.92614633728647 25.21665912772945 24.786288193403834 27 25.275682598303835 24.94353563707934 24.635277444782815 25.145504319834007 28 24.874570474454323 24.715790283570623 25.215833096517752 25.193806145457298 29 24.96883688521488 24.826314884893474 25.06308630554061 25.141761924351037 30 24.989482906465497 24.868489795006646 25.126608432785535 25.015418865742323 31 25.438022262085518 24.60147218418249 24.63913617300367 25.321369380728324 32 25.12203188123616 24.809126439734214 24.559509427804343 25.50933225122528 33 24.864377532741432 24.527888620494736 25.00051189996792 25.60722194679591 34 25.360385933888658 24.49172444816728 25.132734577380678 25.015155040563393 35 25.695270879842948 24.526734314755963 24.98383668161179 24.794158123789302 36 25.081487392335188 24.849729988663434 24.821683309557773 25.247099309443605 37 25.631273019686486 24.613753238888503 24.734311866493265 25.020661874931747 38 25.10899174107558 24.604955354649753 24.98011280784815 25.30594009642651 39 25.376135791101305 24.633047332798892 24.683120177308748 25.307696698791055 40 25.643116144355844 24.731150771491187 24.884654808262663 24.74107827589031 41 24.926147803668876 24.877440411003526 25.143128379657064 25.053283405670534 42 25.748042293047064 24.99951914336787 24.71907114630637 24.533367417278697 43 25.20147842882502 24.361935855745852 25.086011077668392 25.350574637760744 44 25.115979517368853 24.64436774177937 24.729308739119453 25.510344001732328 45 25.071880355350167 24.900571195987357 24.806943698168276 25.220604750494196 46 25.10381849802725 24.72788168072733 24.75896673526888 25.40933308597654 47 25.166842878557745 24.759507996545256 25.02792089823391 25.045728226663094 48 25.567367107629902 25.027874311518467 24.514689157218562 24.890069423633072 49 25.183019103229658 24.855852485268816 24.71606367619129 25.24506473531023 50 25.162095320114215 25.129645233063595 24.61944051830793 25.088818928514257 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 30.0 1 26.5 2 23.0 3 68.5 4 114.0 5 141.5 6 169.0 7 160.5 8 152.0 9 204.5 10 257.0 11 404.5 12 552.0 13 1046.0 14 1540.0 15 2007.0 16 2474.0 17 2497.5 18 2521.0 19 2621.0 20 2721.0 21 3105.0 22 3489.0 23 4351.0 24 5213.0 25 6591.5 26 7970.0 27 10359.0 28 12748.0 29 15379.5 30 18011.0 31 21122.0 32 24233.0 33 28506.5 34 32780.0 35 38321.0 36 43862.0 37 51097.0 38 58332.0 39 64736.0 40 71140.0 41 78425.5 42 85711.0 43 89561.5 44 93412.0 45 101325.0 46 109238.0 47 115759.5 48 122281.0 49 125444.0 50 128607.0 51 127177.0 52 125747.0 53 124364.5 54 122982.0 55 120730.0 56 118478.0 57 113246.0 58 108014.0 59 98418.0 60 88822.0 61 78372.5 62 67923.0 63 58590.5 64 49258.0 65 41726.5 66 34195.0 67 28872.0 68 23549.0 69 20561.0 70 17573.0 71 13728.5 72 9884.0 73 8385.5 74 6887.0 75 5329.5 76 3772.0 77 3313.0 78 2854.0 79 2304.0 80 1754.0 81 1435.5 82 1117.0 83 892.0 84 667.0 85 494.0 86 321.0 87 230.5 88 140.0 89 100.0 90 60.0 91 53.0 92 46.0 93 40.5 94 35.0 95 32.5 96 30.0 97 27.0 98 24.0 99 19.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008314068272150477 2 4.3431699929144285E-4 3 2.4818114245225305E-4 4 0.0 5 0.0 6 1.861358568391898E-4 7 0.0 8 6.204528561306326E-5 9 0.0011168151410351388 10 0.0013649962834873918 11 0.0 12 1.861358568391898E-4 13 7.445434273567592E-4 14 6.204528561306326E-5 15 0.004963622849045061 16 0.0010547698554220753 17 6.204528561306326E-5 18 1.861358568391898E-4 19 1.861358568391898E-4 20 3.722717136783796E-4 21 0.0 22 1.2409057122612653E-4 23 6.204528561306326E-4 24 3.722717136783796E-4 25 0.0013029509978743285 26 0.005770211562014883 27 0.005584075705175694 28 0.003970898279236049 29 0.002792037852587847 30 0.003970898279236049 31 0.00663884556059777 32 0.003536581279944606 33 0.005149758705884251 34 0.0031643095662662263 35 0.00322635485187929 36 0.007879751272859035 37 0.0038468077080099227 38 0.008438158843376602 39 0.004591351135366681 40 0.002605901995748657 41 0.003784762422396859 42 0.0011788604266482021 43 9.306792841959489E-4 44 0.0011788604266482021 45 0.0012409057122612652 46 0.0011788604266482021 47 0.0018613585683918978 48 0.0016752227115527081 49 5.584075705175694E-4 50 0.0012409057122612652 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1611726.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.365676949282324 #Duplication Level Percentage of deduplicated Percentage of total 1 81.14456108596363 50.60635482878513 2 11.427934122696866 14.25421695387586 3 3.1530260173336924 5.899218060291458 4 1.3762595844353986 3.433254425650064 5 0.7486116920863383 2.3343837474556093 6 0.4412485367710826 1.6511258219165315 7 0.3207333528808376 1.400192687083854 8 0.22821837278073323 1.1386394648587275 9 0.1699545090590061 0.9539395207243065 >10 0.8944598976018462 9.735908481696358 >50 0.05099901410122635 2.1847306343951063 >100 0.04059449234719311 4.938307166429421 >500 0.003199361827979837 1.3411558271126467 >1k 1.999601142487398E-4 0.12857237972505822 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 6.204528561306326E-5 0.0 8 0.0 0.0 0.0 6.204528561306326E-5 0.0 9 0.0 0.0 0.0 6.204528561306326E-5 0.0 10 0.0 0.0 0.0 6.204528561306326E-5 0.0 11 0.0 0.0 0.0 6.204528561306326E-5 0.0 12 0.0 0.0 0.0 6.204528561306326E-5 1.8613585683918978E-4 13 0.0 0.0 0.0 6.204528561306326E-5 1.8613585683918978E-4 14 0.0 0.0 0.0 6.204528561306326E-5 1.8613585683918978E-4 15 0.0 0.0 0.0 1.2409057122612653E-4 3.102264280653163E-4 16 0.0 0.0 0.0 1.2409057122612653E-4 3.102264280653163E-4 17 0.0 0.0 0.0 1.8613585683918978E-4 3.102264280653163E-4 18 0.0 0.0 0.0 1.8613585683918978E-4 3.102264280653163E-4 19 0.0 0.0 0.0 2.4818114245225305E-4 3.102264280653163E-4 20 0.0 0.0 0.0 2.4818114245225305E-4 3.102264280653163E-4 21 0.0 0.0 0.0 2.4818114245225305E-4 3.102264280653163E-4 22 0.0 0.0 0.0 4.3431699929144285E-4 3.102264280653163E-4 23 0.0 0.0 0.0 6.204528561306326E-4 3.7227171367837955E-4 24 0.0 0.0 0.0 7.445434273567591E-4 3.7227171367837955E-4 25 0.0 0.0 0.0 0.001178860426648202 3.7227171367837955E-4 26 0.0 0.0 0.0 0.0013649962834873918 4.963622849045061E-4 27 0.0 0.0 0.0 0.0016752227115527081 4.963622849045061E-4 28 0.0 0.0 0.0 0.0026679472813617203 5.584075705175694E-4 29 0.0 0.0 0.0 0.003288400137492353 5.584075705175694E-4 30 0.0 0.0 0.0 0.006824981417436959 5.584075705175694E-4 31 0.0 0.0 0.0 0.018241313970240598 5.584075705175694E-4 32 0.0 0.0 0.0 0.03021605409356181 5.584075705175694E-4 33 0.0 0.0 0.0 0.03995716393481274 5.584075705175694E-4 34 0.0 0.0 0.0 0.05385530791213891 6.204528561306326E-4 35 0.0 0.0 0.0 0.06887026703050023 6.204528561306326E-4 36 0.0 0.0 0.0 0.09114452456558993 6.204528561306326E-4 37 0.0 0.0 0.0 0.12880601293271934 6.204528561306326E-4 38 0.0 0.0 0.0 0.17571224885619516 6.204528561306326E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 1855 0.0 23.71884 1 GCGAATT 50 0.0025808713 21.999907 13 GGTATCA 900 0.0 19.554865 1 TAGTACG 75 0.00129116 17.599926 4 CGTCTTA 145 1.2500459E-7 16.689585 15 GTTATAT 185 4.2382453E-10 16.648062 1 TCTAGAT 280 0.0 16.498394 2 CGAGCCG 415 0.0 16.433666 15 TTAGTAC 95 3.3480785E-4 16.209955 3 GTCCTAT 465 0.0 15.612352 1 TGTCGAC 115 8.220537E-5 15.304284 12 GTGTCGA 145 2.2867043E-6 15.17235 11 GTACTAA 145 2.2874428E-6 15.17188 1 AACGCAG 2775 0.0 15.142279 6 TCAACGC 2840 0.0 14.873177 4 TTAACGG 135 1.9545583E-5 14.668425 35 CCGTCGT 255 1.2732926E-11 14.667971 9 GCCCGTT 105 7.1592024E-4 14.66706 27 GGCGTAA 90 0.004359967 14.666605 6 ATAGCGC 90 0.004359967 14.666605 8 >>END_MODULE