##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063893_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1457703 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14840540219784 32.0 32.0 32.0 32.0 32.0 2 31.020443121815624 32.0 32.0 32.0 32.0 32.0 3 31.275869638739852 32.0 32.0 32.0 32.0 32.0 4 31.4307283445256 32.0 32.0 32.0 32.0 32.0 5 31.29292935529391 32.0 32.0 32.0 32.0 32.0 6 34.9063197372853 36.0 36.0 36.0 36.0 36.0 7 34.946969307190834 36.0 36.0 36.0 36.0 36.0 8 34.86033574740534 36.0 36.0 36.0 32.0 36.0 9 35.04122101690125 36.0 36.0 36.0 36.0 36.0 10 34.798587915370966 36.0 36.0 36.0 32.0 36.0 11 35.05326325047009 36.0 36.0 36.0 36.0 36.0 12 34.925816850208854 36.0 36.0 36.0 32.0 36.0 13 35.00349865507583 36.0 36.0 36.0 36.0 36.0 14 34.91583402105916 36.0 36.0 36.0 32.0 36.0 15 34.856085910504405 36.0 36.0 36.0 32.0 36.0 16 34.89430563015923 36.0 36.0 36.0 32.0 36.0 17 34.85469948267926 36.0 36.0 36.0 32.0 36.0 18 34.853424188603576 36.0 36.0 36.0 32.0 36.0 19 34.85666558962971 36.0 36.0 36.0 32.0 36.0 20 34.83733654935196 36.0 36.0 36.0 32.0 36.0 21 34.828124796340546 36.0 36.0 36.0 32.0 36.0 22 34.801429372101175 36.0 36.0 36.0 32.0 36.0 23 34.75084636582349 36.0 36.0 36.0 32.0 36.0 24 34.719184223398045 36.0 36.0 36.0 32.0 36.0 25 34.676696830561504 36.0 36.0 36.0 32.0 36.0 26 34.614962718743115 36.0 36.0 36.0 32.0 36.0 27 34.5853757589852 36.0 36.0 36.0 32.0 36.0 28 34.540051711494044 36.0 36.0 36.0 32.0 36.0 29 34.50189441882194 36.0 36.0 36.0 32.0 36.0 30 34.47421799913974 36.0 36.0 36.0 32.0 36.0 31 34.471903398703304 36.0 36.0 36.0 32.0 36.0 32 34.41539943321788 36.0 36.0 36.0 32.0 36.0 33 34.414871890913304 36.0 36.0 36.0 32.0 36.0 34 34.39101792340415 36.0 36.0 36.0 32.0 36.0 35 34.356261186263595 36.0 36.0 36.0 32.0 36.0 36 34.3011580548301 36.0 36.0 36.0 32.0 36.0 37 34.260732124445106 36.0 36.0 36.0 32.0 36.0 38 34.20223255354486 36.0 36.0 36.0 32.0 36.0 39 34.14942412823463 36.0 36.0 36.0 32.0 36.0 40 34.1589212617385 36.0 36.0 36.0 32.0 36.0 41 34.133324826799424 36.0 36.0 36.0 32.0 36.0 42 34.06626109708219 36.0 36.0 36.0 32.0 36.0 43 34.06871495771087 36.0 36.0 36.0 32.0 36.0 44 33.96171373729765 36.0 36.0 36.0 32.0 36.0 45 33.920516730774374 36.0 36.0 36.0 32.0 36.0 46 33.88705655404427 36.0 36.0 36.0 32.0 36.0 47 33.85374455564679 36.0 36.0 36.0 32.0 36.0 48 33.820314563391854 36.0 36.0 36.0 32.0 36.0 49 33.79215930817183 36.0 36.0 36.0 32.0 36.0 50 33.116134082182725 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 3.0 20 18.0 21 47.0 22 156.0 23 451.0 24 1110.0 25 2677.0 26 5507.0 27 10656.0 28 18155.0 29 29017.0 30 43382.0 31 65150.0 32 98894.0 33 164242.0 34 327532.0 35 690705.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.179187951684895 19.054979493660117 12.61795090278664 26.14788165186835 2 14.867747045171878 20.747424536889987 39.34008324077879 25.044745177159346 3 18.03617085353363 25.3236449650235 29.218086387188524 27.422097794254345 4 11.633576935768122 16.88684183266413 37.399456542244884 34.08012468932286 5 13.557014014514618 38.023794970580425 33.9340043890971 14.485186625807863 6 33.420205227131476 36.95309466543916 17.093411410562652 12.533288696866713 7 29.5661175592492 30.75566354919637 21.268451168588303 18.409767722966127 8 27.033558962285188 35.35830001035876 19.040778539935776 18.567362487420276 9 27.162833071387947 14.118021545150764 18.71723824727324 40.001907136188045 10 15.552198648410398 27.467755511970644 32.46106342153447 24.51898241808449 11 36.662637493808745 20.55406386216113 23.97280102517524 18.810497618854882 12 25.24583213853037 23.500002058033807 29.99440214803849 21.259763655397332 13 30.09788728384568 20.342499161348346 25.241185239456488 24.318428315349486 14 22.591068121012555 21.04150373876655 25.660355354325308 30.70707278589559 15 24.101284545661606 30.092286414440917 22.093375849663428 23.713053190234053 16 24.325064108104993 25.94392238700303 26.121874687005644 23.609138817886333 17 22.891288554664428 27.299045141568616 26.278809881025143 23.530856422741806 18 23.638644935659002 25.161452752345813 28.736600484872767 22.463301827122418 19 25.611801580980487 24.947605925212475 25.688497588329035 23.752094905478003 20 25.80093915393824 25.1361224398794 25.928880870140876 23.134057536041492 21 25.788380760689932 24.546152405531167 24.730963714830796 24.934503118948097 22 25.379724127617216 26.084051415137377 25.2179627811701 23.318261676075306 23 23.1051235718882 26.066101664684084 26.28144178407814 24.547332979349576 24 24.819355958457873 25.487599994786308 26.18513673243004 23.507907314325777 25 24.194778805137503 25.663831556301343 26.283174427203885 23.858215211357273 26 22.98897730492464 26.84139791400967 26.8506595299627 23.31896525110299 27 24.005134435915256 26.395144376852777 25.67190515426291 23.92781603296906 28 23.15295741544043 26.18422505953112 25.98280372190409 24.68001380312436 29 23.8123594064181 25.481817077931122 25.750878634852185 24.954944880798596 30 23.32651411934036 25.65828740311434 26.659010486771134 24.356187990774167 31 24.935321362439804 25.0254015015186 25.63586081417901 24.40341632186258 32 23.77879280159379 26.25749833980034 25.604051984830438 24.35965687377543 33 22.96917191719172 26.133825272771176 26.735554653026277 24.161448157010824 34 23.96784986358282 26.07362068409596 26.771588181339833 23.186941270981386 35 24.231044434946718 26.1537849387271 26.333662399779374 23.281508226546812 36 23.10898858597702 26.297189956318395 26.5287360737874 24.065085383917186 37 24.23320017370437 25.9927458530826 25.24819075099698 24.52586322221605 38 23.926585766112876 26.578425238338298 25.518800871574488 23.976188123974335 39 24.91506842548661 25.32195789918526 25.451070357371208 24.311903317956922 40 25.592333502782182 25.352223793225747 26.071180866411876 22.98426183758019 41 24.505489303695736 25.2829034070523 26.87443445044877 23.3371728388032 42 24.995506552201515 26.73731784385852 25.881298887683013 22.38587671625695 43 23.44914308921449 26.197623892245065 26.503315547054974 23.849917471485472 44 23.28813359329015 26.4469244922404 25.83060182015507 24.434340094314383 45 23.511575226969946 26.80934524814054 25.650930724259474 24.028148800630042 46 23.696344007535213 25.340041668696134 26.036966732958817 24.926647590809836 47 24.91107426405164 25.343680390100136 26.09123969164637 23.654005654201857 48 24.18876061020377 26.271320738407756 25.17100839211979 24.368910259268688 49 24.331840798408997 25.894371883358637 25.505539895410507 24.268247422821858 50 23.748934949968376 27.16299484522645 24.859948493425847 24.22812171137933 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 14.5 2 18.0 3 61.5 4 105.0 5 121.5 6 138.0 7 138.0 8 138.0 9 200.5 10 263.0 11 416.0 12 569.0 13 1000.0 14 1431.0 15 2031.0 16 2631.0 17 2983.0 18 3335.0 19 3620.5 20 3906.0 21 4371.0 22 4836.0 23 5699.0 24 6562.0 25 8091.0 26 9620.0 27 13199.5 28 16779.0 29 21498.0 30 26217.0 31 31711.0 32 37205.0 33 45629.5 34 54054.0 35 63746.0 36 73438.0 37 77894.5 38 82351.0 39 81189.0 40 80027.0 41 80805.0 42 81583.0 43 79923.0 44 78263.0 45 83832.0 46 89401.0 47 94631.0 48 99861.0 49 101118.5 50 102376.0 51 97826.0 52 93276.0 53 91189.5 54 89103.0 55 89118.5 56 89134.0 57 86633.5 58 84133.0 59 76162.5 60 68192.0 61 60116.0 62 52040.0 63 45127.0 64 38214.0 65 32755.0 66 27296.0 67 23385.5 68 19475.0 69 17693.0 70 15911.0 71 12511.5 72 9112.0 73 7792.0 74 6472.0 75 4991.5 76 3511.0 77 3054.5 78 2598.0 79 2135.5 80 1673.0 81 1364.0 82 1055.0 83 871.5 84 688.0 85 481.0 86 274.0 87 222.0 88 170.0 89 127.0 90 84.0 91 65.5 92 47.0 93 44.5 94 42.0 95 43.0 96 44.0 97 32.0 98 20.0 99 20.5 100 21.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007203113391411008 2 2.744043196728003E-4 3 6.860107991820007E-4 4 0.0 5 0.0 6 6.860107991820007E-5 7 2.744043196728003E-4 8 0.0 9 0.0013720215983640013 10 8.232129590184009E-4 11 6.860107991820007E-5 12 6.860107991820007E-5 13 4.1160647950920043E-4 14 2.0580323975460021E-4 15 0.0045962723545194045 16 6.174097192638006E-4 17 0.0 18 6.860107991820007E-5 19 0.0 20 5.488086393456006E-4 21 0.0 22 0.0 23 6.174097192638006E-4 24 1.3720215983640014E-4 25 0.001989431317627802 26 0.0050764799139468055 27 0.006448501512310806 28 0.004253266954928404 29 0.0030184475164008033 30 0.003910261555337404 31 0.0076833209508384084 32 0.003224250756155403 33 0.0048706766741922055 34 0.002881245356564403 35 0.0030184475164008033 36 0.007546118791002008 37 0.0037044583155828037 38 0.007614719870920207 39 0.004047463715173804 40 0.0024696388770552025 41 0.0034300539959100035 42 0.0017150269979550018 43 0.0017150269979550018 44 0.0017150269979550018 45 0.0014406226782822016 46 9.604151188548011E-4 47 0.0017836280778732018 48 0.0017836280778732018 49 2.744043196728003E-4 50 0.0017150269979550018 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1457703.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.0366737390115 #Duplication Level Percentage of deduplicated Percentage of total 1 76.90879559088481 43.86621881777623 2 13.763984796435686 15.701038203660337 3 4.4359545428029 7.590362759368048 4 1.8791746840387042 4.287274934085024 5 0.9580573141247861 2.732220122450454 6 0.5208194648053546 1.7823485934617758 7 0.32537098487941446 1.2990655096095607 8 0.23158629534589936 1.0567129576056336 9 0.15688145206521995 0.8053196577431689 >10 0.6787024963332133 7.116301851405367 >50 0.06700218174167023 2.6779011252838267 >100 0.06557864380678277 7.591771647795861 >500 0.0066423194097598665 2.5052012315769985 >1k 0.001449233325765789 0.9882625881777117 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1476 0.1012551939592633 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.860107991820007E-5 2 0.0 0.0 0.0 0.0 6.860107991820007E-5 3 0.0 0.0 0.0 0.0 6.860107991820007E-5 4 0.0 0.0 0.0 0.0 6.860107991820007E-5 5 0.0 0.0 0.0 0.0 1.3720215983640014E-4 6 0.0 0.0 0.0 0.0 1.3720215983640014E-4 7 0.0 0.0 0.0 0.0 1.3720215983640014E-4 8 0.0 0.0 0.0 0.0 1.3720215983640014E-4 9 0.0 0.0 0.0 0.0 1.3720215983640014E-4 10 0.0 0.0 0.0 0.0 1.3720215983640014E-4 11 0.0 0.0 0.0 0.0 1.3720215983640014E-4 12 0.0 0.0 0.0 0.0 0.001029016198773001 13 0.0 0.0 0.0 0.0 0.0013034205184458013 14 0.0 0.0 0.0 0.0 0.0013034205184458013 15 0.0 0.0 0.0 0.0 0.0017150269979550018 16 6.860107991820007E-5 0.0 0.0 0.0 0.0017150269979550018 17 6.860107991820007E-5 0.0 0.0 0.0 0.0017150269979550018 18 6.860107991820007E-5 0.0 0.0 6.860107991820007E-5 0.0017836280778732018 19 6.860107991820007E-5 0.0 0.0 6.860107991820007E-5 0.0018522291577914018 20 6.860107991820007E-5 0.0 0.0 1.3720215983640014E-4 0.002126633477464202 21 6.860107991820007E-5 0.0 0.0 2.0580323975460021E-4 0.0022638356373006025 22 6.860107991820007E-5 0.0 0.0 4.8020755942740053E-4 0.0024010377971370026 23 6.860107991820007E-5 0.0 0.0 0.001029016198773001 0.0024010377971370026 24 6.860107991820007E-5 0.0 0.0 0.0024696388770552025 0.0024010377971370026 25 6.860107991820007E-5 0.0 0.0 0.0031556496762372033 0.0024010377971370026 26 6.860107991820007E-5 0.0 0.0 0.0039102615553374045 0.0024010377971370026 27 6.860107991820007E-5 0.0 0.0 0.004390469114764805 0.0024010377971370026 28 6.860107991820007E-5 0.0 0.0 0.006105496112719807 0.0024010377971370026 29 6.860107991820007E-5 0.0 0.0 0.008163528510265809 0.0024010377971370026 30 6.860107991820007E-5 0.0 0.0 0.013445811663967215 0.0024010377971370026 31 6.860107991820007E-5 0.0 0.0 0.023735973651697224 0.0024010377971370026 32 6.860107991820007E-5 0.0 0.0 0.03505515183820024 0.0024696388770552025 33 6.860107991820007E-5 0.0 0.0 0.04465930302674825 0.0024696388770552025 34 6.860107991820007E-5 0.0 0.0 0.05721330065177886 0.0025382399569734027 35 6.860107991820007E-5 0.0 0.0 0.07189393175427368 0.0025382399569734027 36 6.860107991820007E-5 0.0 0.0 0.0937090751682613 0.0025382399569734027 37 6.860107991820007E-5 0.0 0.0 0.12725500324826114 0.0025382399569734027 38 6.860107991820007E-5 0.0 0.0 0.1747955516315738 0.0025382399569734027 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTAGGA 2375 0.0 20.377485 2 GCATTCG 425 0.0 20.187479 22 TTAGGAC 1430 0.0 19.999252 3 CTGTAGG 2285 0.0 19.640404 1 GTCCTAA 1210 0.0 19.453817 1 GATATAC 650 0.0 19.291586 1 TAGGACG 2270 0.0 19.091797 4 GTAGGAC 2490 0.0 18.906923 3 TAGGACC 1415 0.0 18.812017 4 AGGACCT 1575 0.0 18.577084 5 AGGACGT 2295 0.0 18.500397 5 GGACGTG 2290 0.0 18.444725 6 TAGGACA 835 0.0 18.442423 4 TTCGTAT 490 0.0 18.407475 25 GGCGAGA 1470 0.0 18.407475 19 GCGAGAA 1460 0.0 18.382874 20 CGCCTAA 60 0.0074144145 18.332647 39 TTTAGGA 1590 0.0 18.26284 2 TATGGCG 2635 0.0 18.116348 16 TGGCGAG 2675 0.0 18.092161 18 >>END_MODULE