##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063891_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1768061 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.314627153701146 32.0 32.0 32.0 32.0 32.0 2 31.399343687802627 32.0 32.0 32.0 32.0 32.0 3 31.484626944432346 32.0 32.0 32.0 32.0 32.0 4 31.572425951367062 32.0 32.0 32.0 32.0 32.0 5 31.5195335455055 32.0 32.0 32.0 32.0 32.0 6 35.11097354672718 36.0 36.0 36.0 36.0 36.0 7 35.130621058888806 36.0 36.0 36.0 36.0 36.0 8 35.07399179100721 36.0 36.0 36.0 36.0 36.0 9 35.18458752271556 36.0 36.0 36.0 36.0 36.0 10 35.04415854430362 36.0 36.0 36.0 36.0 36.0 11 35.181455843435266 36.0 36.0 36.0 36.0 36.0 12 35.09660639536758 36.0 36.0 36.0 36.0 36.0 13 35.12948252351022 36.0 36.0 36.0 36.0 36.0 14 35.07837851748328 36.0 36.0 36.0 36.0 36.0 15 35.05237658655442 36.0 36.0 36.0 36.0 36.0 16 35.06453057897889 36.0 36.0 36.0 36.0 36.0 17 35.03986174685149 36.0 36.0 36.0 36.0 36.0 18 35.03399713018951 36.0 36.0 36.0 36.0 36.0 19 35.01996084976706 36.0 36.0 36.0 36.0 36.0 20 35.013961056773496 36.0 36.0 36.0 36.0 36.0 21 34.99769238731017 36.0 36.0 36.0 36.0 36.0 22 34.97824000416275 36.0 36.0 36.0 36.0 36.0 23 34.935945083342716 36.0 36.0 36.0 36.0 36.0 24 34.9078798751853 36.0 36.0 36.0 36.0 36.0 25 34.87604613189251 36.0 36.0 36.0 32.0 36.0 26 34.818763606006804 36.0 36.0 36.0 32.0 36.0 27 34.79740687679893 36.0 36.0 36.0 32.0 36.0 28 34.76025205012723 36.0 36.0 36.0 32.0 36.0 29 34.731819207595215 36.0 36.0 36.0 32.0 36.0 30 34.697578873127114 36.0 36.0 36.0 32.0 36.0 31 34.696759896858765 36.0 36.0 36.0 32.0 36.0 32 34.650930595720396 36.0 36.0 36.0 32.0 36.0 33 34.645284297317794 36.0 36.0 36.0 32.0 36.0 34 34.63160094589497 36.0 36.0 36.0 32.0 36.0 35 34.60136499815334 36.0 36.0 36.0 32.0 36.0 36 34.55585355935118 36.0 36.0 36.0 32.0 36.0 37 34.51678194360941 36.0 36.0 36.0 32.0 36.0 38 34.472283478907116 36.0 36.0 36.0 32.0 36.0 39 34.41151691033284 36.0 36.0 36.0 32.0 36.0 40 34.430581863408555 36.0 36.0 36.0 32.0 36.0 41 34.4156315873717 36.0 36.0 36.0 32.0 36.0 42 34.36216284392903 36.0 36.0 36.0 32.0 36.0 43 34.36473741573396 36.0 36.0 36.0 32.0 36.0 44 34.26854390204863 36.0 36.0 36.0 32.0 36.0 45 34.24149449594782 36.0 36.0 36.0 32.0 36.0 46 34.17379038392906 36.0 36.0 36.0 32.0 36.0 47 34.15421470186832 36.0 36.0 36.0 32.0 36.0 48 34.11337674435441 36.0 36.0 36.0 32.0 36.0 49 34.084237478231806 36.0 36.0 36.0 32.0 36.0 50 33.51459593305887 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 1.0 18 1.0 19 6.0 20 19.0 21 46.0 22 181.0 23 543.0 24 1471.0 25 3359.0 26 6921.0 27 12406.0 28 20490.0 29 31875.0 30 45458.0 31 64135.0 32 93632.0 33 150662.0 34 312856.0 35 1023998.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.1031986116799 18.465324804908896 11.923805300323775 26.50767128308743 2 15.131486294261206 20.371029181784504 39.244367398073024 25.253117125881264 3 18.207105313912393 24.991841326382577 28.949406042904723 27.851647316800303 4 11.803382349364643 16.457633531874748 37.04436668191878 34.69461743684183 5 13.524646491269248 37.92244724588122 33.927223099203026 14.625683163646503 6 33.453125919088535 36.61959802178212 17.118462311148516 12.808813747980832 7 29.738057680136603 30.59685157921588 21.231676961371807 18.433413779275714 8 27.089280290668704 35.3596963000711 19.04725006659838 18.50377334266182 9 27.661252007873127 13.734983371416936 18.6706183118029 39.933146308907034 10 16.045668624200456 27.087437451959538 32.033306919918715 24.83358700392129 11 36.73617595772997 20.328257905128837 24.217546792785996 18.7180193443552 12 25.60013483697678 23.266109031306044 29.81147143678866 21.322284694928513 13 30.285172930629788 20.065835242216 25.284522496535732 24.364469330618476 14 22.848923988310332 20.894631790717156 25.24686704105128 31.009577179921237 15 24.21747737556561 30.054468325791856 21.816742081447966 23.91131221719457 16 24.36848505415571 25.704137326433074 25.975170385452902 23.952207233958315 17 23.018606258494476 27.189107163157832 26.02291436777351 23.769372210574183 18 23.708498250623002 24.792229666673833 28.738480298723236 22.760791783979936 19 26.14892811956149 24.306344634036947 25.353310773779864 24.1914164726217 20 26.119744032650882 24.774128157878962 25.570830491199846 23.53529731827031 21 26.17568059020588 24.11166809289951 24.42670247236945 25.28594884452516 22 25.873118487561786 25.79048549850429 24.850358500479906 23.48603751345402 23 23.311667230377488 25.736943495814025 26.375444982766282 24.5759442910422 24 25.29375533425751 24.957283520346955 26.0727478192113 23.676213326184225 25 24.391484085969083 25.41081010457396 26.298860144420544 23.89884566503642 26 23.405727136618346 26.316128846150583 26.6605918995186 23.61755211771247 27 24.226281649543314 25.988882076250768 25.51398337967687 24.27085289452905 28 23.39796978604529 25.914385310784954 25.777393663203036 24.91025123996672 29 24.31432236520606 25.113346364771676 25.347109102097697 25.22522216792456 30 23.51322872225198 25.375719241248206 26.448621019463136 24.662431017036678 31 25.416425569992136 24.667371432546947 25.33384465625129 24.582358341209627 32 24.138463487639168 26.014194538021407 25.284162253026576 24.563179721312846 33 23.233227639397782 25.924407154306735 26.610380780973735 24.23198442532175 34 24.414046260919733 25.604647019397458 26.510974171599223 23.470332548083586 35 24.567976439140573 25.739062463765904 26.339396057843334 23.35356503925019 36 23.377731120005247 25.92332614612581 26.380520782191414 24.31842195167753 37 24.40000271491984 25.75191967457161 24.916063728218425 24.932013882290125 38 24.185732652540615 26.452552944417203 25.4032520352795 23.95846236776269 39 25.385270631195638 24.92712013384782 25.1650755835197 24.522533651436838 40 25.998191200001358 25.025126935565883 25.821779467801043 23.15490239663172 41 24.959248152450936 24.960096560102897 26.444527148479256 23.63612813896691 42 25.155299703116402 26.526880437186414 25.756250024745015 22.561569834952174 43 23.716598530799146 26.03470743808384 26.235325525045873 24.013368506071142 44 23.33312971849117 26.261563626244595 25.612541316845057 24.79276533841918 45 23.70329647332839 26.406118410149993 25.580967862170617 24.309617254351 46 24.074276221982537 25.16044521390527 25.807372985703452 24.95790557840874 47 25.19593874980416 25.07795412626617 25.696722957285157 24.029384166644512 48 24.33865396547443 26.188120855893843 24.922356779295292 24.550868399336434 49 24.651778366623212 25.641905936184113 25.12812101433496 24.578194682857717 50 23.929702828617273 27.2734676932666 24.578218668500714 24.21861080961541 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 19.0 1 21.0 2 23.0 3 90.0 4 157.0 5 161.5 6 166.0 7 179.0 8 192.0 9 295.5 10 399.0 11 559.0 12 719.0 13 1312.0 14 1905.0 15 2681.0 16 3457.0 17 3791.5 18 4126.0 19 4320.0 20 4514.0 21 4912.0 22 5310.0 23 6078.0 24 6846.0 25 8175.0 26 9504.0 27 13031.0 28 16558.0 29 21775.5 30 26993.0 31 33894.5 32 40796.0 33 51293.5 34 61791.0 35 73877.0 36 85963.0 37 91234.0 38 96505.0 39 94031.5 40 91558.0 41 92562.5 42 93567.0 43 92732.5 44 91898.0 45 98155.0 46 104412.0 47 111144.5 48 117877.0 49 122525.5 50 127174.0 51 124795.0 52 122416.0 53 119766.5 54 117117.0 55 116991.5 56 116866.0 57 113088.5 58 109311.0 59 99460.0 60 89609.0 61 78278.0 62 66947.0 63 57057.0 64 47167.0 65 40383.0 66 33599.0 67 28737.0 68 23875.0 69 21481.5 70 19088.0 71 14937.0 72 10786.0 73 8998.5 74 7211.0 75 5602.0 76 3993.0 77 3491.5 78 2990.0 79 2462.5 80 1935.0 81 1560.0 82 1185.0 83 1003.0 84 821.0 85 594.0 86 367.0 87 246.0 88 125.0 89 101.5 90 78.0 91 69.0 92 60.0 93 42.0 94 24.0 95 26.5 96 29.0 97 22.0 98 15.0 99 16.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009558493739752191 2 3.3935480732848015E-4 3 2.2623653821898681E-4 4 0.0 5 0.0 6 2.8279567277373344E-4 7 0.0 8 0.0 9 0.0011877418256496805 10 0.0011311826910949338 11 0.0 12 0.0 13 6.221504801022137E-4 14 2.2623653821898681E-4 15 0.0034501072078395485 16 6.221504801022137E-4 17 0.0 18 1.6967740366424008E-4 19 0.0 20 0.001300860094759174 21 0.0 22 1.1311826910949341E-4 23 8.483870183212005E-4 24 4.5247307643797363E-4 25 0.001696774036642401 26 0.005203440379036696 27 0.0059387091282484036 28 0.003959139418832269 29 0.001640214902087654 30 0.0029410749968468283 31 0.005542795186365176 32 0.0032238706696205615 33 0.0035632254769490416 34 0.002601720189518348 35 0.0024886019204088546 36 0.0059387091282484036 37 0.002997634131401575 38 0.006900214415679097 39 0.004694408168043976 40 0.0021492471130803745 41 0.002432042785854108 42 0.0015836557675329075 43 0.0014139783638686674 44 9.615052874306938E-4 45 0.0011311826910949338 46 6.787096146569603E-4 47 0.0019230105748613876 48 0.0021492471130803745 49 3.3935480732848015E-4 50 0.0013574192293139206 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 1768061.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.134282275126985 #Duplication Level Percentage of deduplicated Percentage of total 1 74.21745777337532 37.950564355260916 2 14.483398561514694 14.811963806953212 3 4.926855916497901 7.557937234892494 4 2.237186089286375 4.575876199662279 5 1.1534734998830705 2.9491019769949793 6 0.7005134583476083 2.1492151750003208 7 0.44983988989959384 1.6101567936116514 8 0.29788930047430395 1.2185884461754544 9 0.2294169883281984 1.0557965735895247 >10 1.1238375868713064 10.268504519231895 >50 0.09426723819539254 3.357283475328301 >100 0.07548017932516367 8.045562006220942 >500 0.007815551183764058 2.7486847135193195 >1k 0.002567966817522476 1.7007647235588434 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTAGGACGTGGAATATGGCAAGAAAACTGAAAATCATGGAAAATGAGA 1948 0.11017719411264656 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.131182691094934E-4 2 0.0 0.0 0.0 0.0 1.131182691094934E-4 3 0.0 0.0 0.0 0.0 1.131182691094934E-4 4 0.0 0.0 0.0 0.0 1.131182691094934E-4 5 5.65591345547467E-5 0.0 0.0 0.0 1.131182691094934E-4 6 5.65591345547467E-5 0.0 0.0 0.0 1.696774036642401E-4 7 5.65591345547467E-5 0.0 0.0 0.0 1.696774036642401E-4 8 5.65591345547467E-5 0.0 0.0 0.0 1.696774036642401E-4 9 5.65591345547467E-5 0.0 0.0 0.0 1.696774036642401E-4 10 5.65591345547467E-5 0.0 0.0 0.0 1.696774036642401E-4 11 5.65591345547467E-5 0.0 0.0 0.0 2.262365382189868E-4 12 5.65591345547467E-5 0.0 0.0 0.0 6.787096146569604E-4 13 5.65591345547467E-5 0.0 0.0 0.0 8.483870183212005E-4 14 5.65591345547467E-5 0.0 0.0 0.0 8.483870183212005E-4 15 5.65591345547467E-5 0.0 0.0 0.0 0.0010746235565401872 16 5.65591345547467E-5 0.0 0.0 1.131182691094934E-4 0.001131182691094934 17 5.65591345547467E-5 0.0 0.0 2.262365382189868E-4 0.0011877418256496805 18 5.65591345547467E-5 0.0 0.0 2.827956727737335E-4 0.001300860094759174 19 5.65591345547467E-5 0.0 0.0 3.393548073284802E-4 0.001300860094759174 20 5.65591345547467E-5 0.0 0.0 5.090322109927202E-4 0.001527096632978161 21 5.65591345547467E-5 0.0 0.0 5.65591345547467E-4 0.001527096632978161 22 5.65591345547467E-5 0.0 0.0 7.918278837664537E-4 0.0016402149020876542 23 5.65591345547467E-5 0.0 0.0 0.0019795697094161344 0.0016402149020876542 24 5.65591345547467E-5 0.0 0.0 0.0028845158622920817 0.0016402149020876542 25 1.131182691094934E-4 0.0 0.0 0.0036197846115037886 0.0016402149020876542 26 1.131182691094934E-4 0.0 0.0 0.004128816822496509 0.0016402149020876542 27 1.131182691094934E-4 0.0 0.0 0.004864085571708216 0.0017533331711971475 28 1.131182691094934E-4 0.0 0.0 0.006221504801022137 0.0017533331711971475 29 1.131182691094934E-4 0.0 0.0 0.009445375470642699 0.0017533331711971475 30 1.131182691094934E-4 0.0 0.0 0.015384084598891101 0.0017533331711971475 31 1.131182691094934E-4 0.0 0.0 0.02980666391035151 0.0018098923057518943 32 1.131182691094934E-4 0.0 0.0 0.04519074850924261 0.0018098923057518943 33 1.131182691094934E-4 0.0 0.0 0.0599526826280315 0.001866451440306641 34 1.131182691094934E-4 0.0 0.0 0.07725977780178399 0.0019795697094161344 35 1.131182691094934E-4 0.0 0.0 0.09648988355039786 0.0019795697094161344 36 1.131182691094934E-4 0.0 0.0 0.12397762294400476 0.0019795697094161344 37 1.131182691094934E-4 0.0 0.0 0.1675281565511597 0.0019795697094161344 38 1.131182691094934E-4 0.0 0.0 0.22646277475720578 0.002036128843970881 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAC 465 0.0 22.235474 1 GTATCAA 3305 0.0 22.231895 1 TGTAGGA 2935 0.0 20.837141 2 TTAGGAC 1755 0.0 20.80869 3 ACCGTCG 350 0.0 20.741844 8 GTATTAG 400 0.0 20.349005 1 TAGGACG 2915 0.0 20.300894 4 GTAGGAC 2975 0.0 20.18782 3 CTGTAGG 2870 0.0 20.005991 1 TACCGTC 365 0.0 19.889439 7 AGGACGT 2915 0.0 19.848087 5 GGACGTG 2925 0.0 19.78023 6 GTCCTAC 2410 0.0 19.716879 1 AAATTTA 1320 0.0 19.4996 44 TAGGACA 905 0.0 19.446564 4 TAGGACC 1730 0.0 19.074213 4 TCCTACA 2640 0.0 18.999073 2 CTTTAGG 1895 0.0 18.92256 1 CGTCGTA 375 0.0 18.772417 10 ATACCGT 375 0.0 18.772417 6 >>END_MODULE