##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063890_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 692499 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.31784017016631 32.0 32.0 32.0 32.0 32.0 2 30.95423675702059 32.0 32.0 32.0 32.0 32.0 3 30.953137838466194 32.0 32.0 32.0 32.0 32.0 4 30.99253139715725 32.0 32.0 32.0 32.0 32.0 5 30.91465836051749 32.0 32.0 32.0 32.0 32.0 6 34.57716762045866 36.0 36.0 36.0 32.0 36.0 7 34.523732164234175 36.0 36.0 36.0 32.0 36.0 8 34.49165558361817 36.0 36.0 36.0 32.0 36.0 9 34.624307038710526 36.0 36.0 36.0 32.0 36.0 10 34.36308355679936 36.0 36.0 36.0 32.0 36.0 11 34.58957197050104 36.0 36.0 36.0 32.0 36.0 12 34.43958475030289 36.0 36.0 36.0 32.0 36.0 13 34.491427424443934 36.0 36.0 36.0 32.0 36.0 14 34.41338110235538 36.0 36.0 36.0 32.0 36.0 15 34.35552109100519 36.0 36.0 36.0 32.0 36.0 16 34.35155718636417 36.0 36.0 36.0 32.0 36.0 17 34.31091308435102 36.0 36.0 36.0 32.0 36.0 18 34.28628344589667 36.0 36.0 36.0 32.0 36.0 19 34.301096463677204 36.0 36.0 36.0 32.0 36.0 20 34.28496358839507 36.0 36.0 36.0 32.0 36.0 21 34.27446826638017 36.0 36.0 36.0 32.0 36.0 22 34.24126677439246 36.0 36.0 36.0 32.0 36.0 23 34.189971393460496 36.0 36.0 36.0 32.0 36.0 24 34.183184380049646 36.0 36.0 36.0 32.0 36.0 25 33.79388562293953 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 5.0 5 9.0 6 35.0 7 14.0 8 27.0 9 51.0 10 48.0 11 18.0 12 30.0 13 41.0 14 44.0 15 92.0 16 175.0 17 249.0 18 301.0 19 434.0 20 570.0 21 857.0 22 1273.0 23 2015.0 24 2974.0 25 4571.0 26 6694.0 27 9000.0 28 12420.0 29 17169.0 30 22922.0 31 31508.0 32 44917.0 33 64519.0 34 142014.0 35 327501.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.1862144881644 17.399607647125105 12.154704911922847 26.259472952787643 2 16.28358355525004 19.742162633655475 37.936492348928155 26.03776146216633 3 18.855633599426994 23.31910444657525 28.69565970818267 29.12960224581509 4 13.215909287830915 16.168069362692712 35.6932225809992 34.92279876847718 5 14.95922325610279 36.207900015741686 33.74873091681602 15.084145811339503 6 33.88888327241059 35.08846675438001 17.341679099142556 13.680970874066842 7 30.356095686813745 30.47308988910105 20.589390792411844 18.581423631673363 8 27.792062960095226 33.31912840484913 19.475968150142723 19.412840484912923 9 27.498078512277296 14.842842530469305 18.376357321590586 39.28272163566281 10 15.979141621971518 27.276129323099685 31.899331884594044 24.845397170334753 11 36.5051248190348 21.29826822438819 22.795403122570875 19.401203834006143 12 24.536600872756697 23.545212842817097 29.047336936103807 22.870849348322402 13 29.75685102718448 20.05545553587271 24.86006074389599 25.32763269304682 14 23.63356828473914 19.430163367810213 25.588751231833168 31.347517115617478 15 25.223381997665033 26.938626301857564 22.30265515367988 25.535336546797517 16 25.47710599288766 25.90164976728123 23.73919313562714 24.882051104203967 17 24.065460734973897 25.89892194388213 25.227900283060173 24.8077170380838 18 24.507695642748754 25.915600838210857 25.655466435436086 23.921237083604307 19 25.56222560702446 25.149642620761814 25.30716116893214 23.980970603281587 20 25.875456859064126 24.833767611384012 24.97582928320276 24.314946246349102 21 26.160431455062543 24.764878956738883 24.565596892413698 24.509092695784872 22 26.01440845141664 24.54711650324082 24.93139004704063 24.507084998301913 23 25.146006974804852 24.842214189811234 24.93861275669551 25.073166078688402 24 24.9782865995442 24.713390339740656 25.13349586469914 25.174827196016007 25 24.918385308054816 24.68643917158378 25.22938100007081 25.16579452029059 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 19.0 2 65.5 3 112.0 4 112.0 5 112.0 6 235.5 7 359.0 8 359.0 9 359.0 10 512.0 11 665.0 12 665.0 13 665.0 14 1183.5 15 1702.0 16 1702.0 17 1702.0 18 3090.0 19 4478.0 20 4478.0 21 4478.0 22 6939.5 23 9401.0 24 9401.0 25 9401.0 26 13721.5 27 18042.0 28 18042.0 29 18042.0 30 23929.0 31 29816.0 32 29816.0 33 29816.0 34 36412.5 35 43009.0 36 43009.0 37 43009.0 38 51084.5 39 59160.0 40 59160.0 41 59160.0 42 67390.5 43 75621.0 44 75621.0 45 75621.0 46 83580.0 47 91539.0 48 91539.0 49 91539.0 50 94600.0 51 97661.0 52 97661.0 53 97661.0 54 91912.0 55 86163.0 56 86163.0 57 86163.0 58 77528.5 59 68894.0 60 68894.0 61 68894.0 62 58510.5 63 48127.0 64 48127.0 65 48127.0 66 38901.0 67 29675.0 68 29675.0 69 29675.0 70 22221.5 71 14768.0 72 14768.0 73 14768.0 74 11029.0 75 7290.0 76 7290.0 77 7290.0 78 5417.5 79 3545.0 80 3545.0 81 3545.0 82 2401.5 83 1258.0 84 1258.0 85 1258.0 86 884.5 87 511.0 88 511.0 89 511.0 90 372.0 91 233.0 92 233.0 93 233.0 94 166.0 95 99.0 96 99.0 97 99.0 98 225.5 99 352.0 100 352.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.038267203273939746 2 0.00678701341084969 3 0.0015884499472201405 4 0.0033213044350966572 5 0.010108317845946348 6 0.013285217740386629 7 0.022671512883051095 8 0.036245539704750473 9 0.04722028479463508 10 0.05819502988451969 11 0.0544405118274539 12 0.06339359334814924 13 0.05963907529108345 14 0.06368240242946199 15 0.059350266209770706 16 0.0667148977832459 17 0.06064990707567809 18 0.07927809282035064 19 0.0746571475193466 20 0.07884487919838151 21 0.07436833843803384 22 0.07855607011706876 23 0.08375463358069832 24 0.07653440654787949 25 0.07624559746656674 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 692499.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.174569731096234 #Duplication Level Percentage of deduplicated Percentage of total 1 60.896099787557354 27.509551062048043 2 17.280263494226645 15.612569363833165 3 8.385855825753147 11.364822862662153 4 4.4277211248465855 8.000815868169198 5 2.6903905243576864 6.076861717323842 6 1.7076054053256777 4.6284203673649005 7 1.1287530792761125 3.5693654282263836 8 0.777720727577244 2.8106559391405685 9 0.5764677491834421 2.343751427989395 >10 2.049736379340927 14.437435777614862 >50 0.053673903162877026 1.6814602850557123 >100 0.02506919940749288 1.7489715531313188 >500 6.427999847980852E-4 0.21531834744047046 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 911 0.1315525365379589 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTAGT 25 0.006031289 18.998627 1 GGACCGA 50 8.7189226E-5 15.196706 6 CGAACCT 40 0.005270132 14.25206 16 TTTAACC 40 0.005282781 14.246911 3 GTATCAA 630 0.0 14.022797 1 CTAGACC 55 1.961283E-4 13.815187 4 TTAGAGC 50 0.0015005314 13.297117 3 GTCCTAA 75 1.4768757E-5 12.665751 1 GTCTATA 85 3.937572E-6 12.293229 1 TCAAGAC 70 1.0914213E-4 12.211638 3 TCCTAAA 70 1.09363194E-4 12.208992 2 GTTCTAT 110 3.803507E-8 12.090035 1 GTCTTTA 55 0.0030671482 12.090035 1 CTAACAC 80 2.8673356E-5 11.872426 3 GGTATCA 210 0.0 11.761055 1 GGATAGT 65 8.028146E-4 11.689773 6 TATGATG 65 8.042757E-4 11.687241 2 GTCTTAA 90 7.449722E-6 11.610272 1 GTAGGAC 90 7.4617183E-6 11.608595 3 TTATACA 90 7.4617183E-6 11.608595 4 >>END_MODULE