##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063889_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 467400 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.52124518613607 32.0 32.0 32.0 14.0 32.0 2 27.423095849379546 32.0 21.0 32.0 14.0 32.0 3 27.679328198545143 32.0 21.0 32.0 14.0 32.0 4 27.459738981600342 32.0 21.0 32.0 14.0 32.0 5 27.49783269148481 32.0 21.0 32.0 14.0 32.0 6 30.783403936670947 36.0 21.0 36.0 21.0 36.0 7 30.752282841249464 36.0 21.0 36.0 21.0 36.0 8 30.394197689345315 36.0 21.0 36.0 14.0 36.0 9 31.109067180145487 36.0 32.0 36.0 14.0 36.0 10 29.447488232777065 32.0 21.0 36.0 14.0 36.0 11 31.501014120667524 36.0 32.0 36.0 21.0 36.0 12 30.36280915703894 36.0 21.0 36.0 14.0 36.0 13 30.90241762943945 36.0 32.0 36.0 14.0 36.0 14 30.147693624304665 36.0 21.0 36.0 14.0 36.0 15 29.883893881044074 36.0 21.0 36.0 14.0 36.0 16 30.08188703465982 36.0 21.0 36.0 14.0 36.0 17 29.786416345742406 36.0 21.0 36.0 14.0 36.0 18 29.902441163885324 36.0 21.0 36.0 14.0 36.0 19 29.930246041934105 36.0 21.0 36.0 14.0 36.0 20 29.87025246041934 36.0 21.0 36.0 14.0 36.0 21 29.857948224219083 36.0 21.0 36.0 14.0 36.0 22 29.70995507060334 36.0 21.0 36.0 14.0 36.0 23 29.55703465982028 36.0 21.0 36.0 14.0 36.0 24 29.551444159178434 36.0 21.0 36.0 14.0 36.0 25 28.415265297389816 32.0 21.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 2.0 4 6.0 5 5.0 6 16.0 7 15.0 8 19.0 9 28.0 10 23.0 11 20.0 12 22.0 13 18.0 14 323.0 15 649.0 16 1017.0 17 1537.0 18 2484.0 19 3871.0 20 5973.0 21 8601.0 22 11064.0 23 14330.0 24 17837.0 25 21705.0 26 26024.0 27 30443.0 28 34614.0 29 37811.0 30 40566.0 31 43237.0 32 46375.0 33 44463.0 34 46870.0 35 27432.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.62148430644906 18.752220381713045 12.256721068693794 26.369574243144108 2 15.635751330811495 20.162649983739282 39.08584803929959 25.115750646149632 3 17.940286053552136 24.693888466928403 29.195220316862613 28.17060516265685 4 12.005391642953423 16.006333040929416 37.201480562271335 34.786794753845825 5 13.851522666147451 37.1443671087851 34.32476555028018 14.679344674787268 6 32.86894786843434 36.800212257893335 17.178981333287688 13.15185854038463 7 29.309909485802322 30.873044743543105 21.66499047782081 18.152055292833758 8 26.99944358842664 33.99268104776579 19.72693032015066 19.280945043656907 9 26.8927346896844 14.417829181951655 19.29397261329441 39.39546351506954 10 15.354007966490228 26.756448426500455 32.358462094960046 25.531081512049266 11 35.91213316581302 21.142876712035562 24.079904624716665 18.865085497434755 12 24.93262638305888 23.645089271380286 29.584884335714335 21.8374000098465 13 28.99478329369607 20.150571654254602 25.83008136520583 25.0245636868435 14 22.8051623343958 20.779915787761183 25.769287578159616 30.6456342996834 15 24.08681003722326 28.89629501199749 22.529597736209304 24.487297214569942 16 24.6873648744108 26.234807067416167 25.142029035144425 23.93579902302861 17 22.976614758923315 26.6955637609033 26.4594637983625 23.868357681810885 18 23.692706214810215 25.07696259981589 27.989766864336023 23.240564321037873 19 25.038962818339073 25.016056106458407 26.122000719313572 23.82298035588895 20 25.041157945892017 24.966656176474995 25.822570182593562 24.169615695039422 21 25.560236682337024 24.549370188643703 25.099331226826283 24.791061902192993 22 24.858169237817542 25.326799484485317 25.635722940831418 24.17930833686572 23 22.955533194887494 25.179729816523583 26.640690231004733 25.22404675758419 24 24.257805141203267 25.347228168724634 26.267318593618878 24.127648096453218 25 23.78339495481686 25.108167647543667 26.665653319745918 24.44278407789355 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 20.0 2 78.5 3 137.0 4 137.0 5 137.0 6 467.0 7 797.0 8 797.0 9 797.0 10 864.0 11 931.0 12 931.0 13 931.0 14 1129.0 15 1327.0 16 1327.0 17 1327.0 18 2385.5 19 3444.0 20 3444.0 21 3444.0 22 5924.0 23 8404.0 24 8404.0 25 8404.0 26 12938.0 27 17472.0 28 17472.0 29 17472.0 30 22114.5 31 26757.0 32 26757.0 33 26757.0 34 31496.5 35 36236.0 36 36236.0 37 36236.0 38 39768.0 39 43300.0 40 43300.0 41 43300.0 42 47371.0 43 51442.0 44 51442.0 45 51442.0 46 55779.5 47 60117.0 48 60117.0 49 60117.0 50 59802.0 51 59487.0 52 59487.0 53 59487.0 54 54123.5 55 48760.0 56 48760.0 57 48760.0 58 43993.5 59 39227.0 60 39227.0 61 39227.0 62 34315.0 63 29403.0 64 29403.0 65 29403.0 66 24215.0 67 19027.0 68 19027.0 69 19027.0 70 14222.5 71 9418.0 72 9418.0 73 9418.0 74 7312.5 75 5207.0 76 5207.0 77 5207.0 78 4498.5 79 3790.0 80 3790.0 81 3790.0 82 2623.0 83 1456.0 84 1456.0 85 1456.0 86 1094.0 87 732.0 88 732.0 89 732.0 90 495.5 91 259.0 92 259.0 93 259.0 94 155.5 95 52.0 96 52.0 97 52.0 98 125.0 99 198.0 100 198.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.029525032092426188 2 0.0034231921266581087 3 0.0010697475395806588 4 0.0021394950791613176 5 0.0062045357295678226 6 0.009413778348309799 7 0.014976465554129226 8 0.025673940949935817 9 0.03551561831407788 10 0.04129225502781343 11 0.04129225502781343 12 0.04899443731279418 13 0.052845528455284556 14 0.052845528455284556 15 0.04685494223363286 16 0.0517757809157039 17 0.04813863928112966 18 0.06204535729567821 19 0.06161745827984596 20 0.06354300385109114 21 0.059050064184852376 22 0.06290115532734275 23 0.06632434745400086 24 0.058194266153187846 25 0.06439880188275567 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 467400.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.11311618124877 #Duplication Level Percentage of deduplicated Percentage of total 1 87.12057699709604 54.984510977951516 2 7.680444106033084 9.694735223753067 3 2.0745506473107707 3.927940680828286 4 0.8840528038260532 2.231813092729297 5 0.4975749016632689 1.5701751288773664 6 0.32199123206189034 1.2193122023079312 7 0.2142768142421727 0.9466574230549876 8 0.16243745757621167 0.8201547305755292 9 0.11524708458679421 0.6546242375168895 >10 0.7476335856407479 9.285486181580051 >50 0.10330912688148934 4.602378509658932 >100 0.07621165084062197 9.150885513343725 >500 0.001016155344541626 0.34417898604128855 >1k 6.774368963610841E-4 0.5671471117810799 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 1584 0.33889602053915274 No Hit TATCAACGCAGAGTACTTTTTTTTT 1069 0.22871202396234488 No Hit CTATTGGAGCTGGAATTACCGCGGC 554 0.11852802738553701 No Hit GTCCTAAAGTGTGTATTTCTCATTT 535 0.1144629867351305 No Hit GTATCTGATCGTCTTCGAACCTCCG 521 0.11146769362430466 No Hit CTTTAGGACGTGAAATATGGCGAGG 495 0.10590500641848523 No Hit CTGTAGGACGTGGAATATGGCAAGA 481 0.10290971330765938 No Hit GAATAGGACCGCGGTTCTATTTTGT 479 0.10248181429182712 No Hit GTCCTACAGTGGACATTTCTAAATT 474 0.10141206675224647 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 470 0.10055626872058193 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 2.139495079161318E-4 13 0.0 0.0 0.0 0.0 4.278990158322636E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGGA 35 9.918565E-5 19.000536 14 TGTCGAG 25 0.0060249227 19.000536 18 GCGTAAC 25 0.0060249227 19.000536 11 TCTTATA 40 1.2853117E-5 18.994434 2 AGATAGT 35 0.0021667369 16.286173 1 AACGGAC 35 0.0021667369 16.286173 15 GGGTAAT 60 2.5600033E-5 14.2504015 11 GTATAGG 40 0.0052708066 14.2504015 1 GCTCGTA 40 0.0052708066 14.2504015 9 TATGTCG 40 0.0052708066 14.2504015 16 TTGCGCG 55 1.9550702E-4 13.81857 18 TTTGCGC 55 1.9550702E-4 13.81857 17 ATTTGCG 55 1.9550702E-4 13.81857 16 TAGGACA 85 2.687957E-7 13.410707 4 ATAAGAC 50 0.0014977013 13.298951 3 ATCCCCG 65 5.4351414E-5 13.154217 12 CCGTCGT 80 1.990249E-6 13.062868 9 CGTCGTA 80 1.990249E-6 13.062868 10 GTCGTAG 90 5.3760596E-7 12.667024 11 GTCCTAC 270 0.0 12.667023 1 >>END_MODULE