##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063889_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 467400 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.53125588361147 32.0 32.0 32.0 21.0 32.0 2 29.96609328198545 32.0 32.0 32.0 21.0 32.0 3 30.877567394094992 32.0 32.0 32.0 32.0 32.0 4 31.250021394950792 32.0 32.0 32.0 32.0 32.0 5 30.998151476251603 32.0 32.0 32.0 32.0 32.0 6 34.71662173727 36.0 36.0 36.0 32.0 36.0 7 34.760502781343604 36.0 36.0 36.0 32.0 36.0 8 34.6247432605905 36.0 36.0 36.0 32.0 36.0 9 34.9129567821994 36.0 36.0 36.0 32.0 36.0 10 34.52624304664099 36.0 36.0 36.0 32.0 36.0 11 34.97579589216945 36.0 36.0 36.0 36.0 36.0 12 34.76095421480531 36.0 36.0 36.0 32.0 36.0 13 34.894137783483096 36.0 36.0 36.0 32.0 36.0 14 34.78320068463842 36.0 36.0 36.0 32.0 36.0 15 34.68106974753958 36.0 36.0 36.0 32.0 36.0 16 34.74318142918271 36.0 36.0 36.0 32.0 36.0 17 34.68575096277279 36.0 36.0 36.0 32.0 36.0 18 34.7000106974754 36.0 36.0 36.0 32.0 36.0 19 34.713560119811724 36.0 36.0 36.0 32.0 36.0 20 34.71996576807874 36.0 36.0 36.0 32.0 36.0 21 34.732079589216944 36.0 36.0 36.0 32.0 36.0 22 34.695635430038514 36.0 36.0 36.0 32.0 36.0 23 34.63401797175867 36.0 36.0 36.0 32.0 36.0 24 34.632302096705175 36.0 36.0 36.0 32.0 36.0 25 34.57161103979461 36.0 36.0 36.0 32.0 36.0 26 34.492866923406076 36.0 36.0 36.0 32.0 36.0 27 34.480979888746255 36.0 36.0 36.0 32.0 36.0 28 34.46408001711596 36.0 36.0 36.0 32.0 36.0 29 34.424439452289256 36.0 36.0 36.0 32.0 36.0 30 34.40179075738126 36.0 36.0 36.0 32.0 36.0 31 34.40274497218656 36.0 36.0 36.0 32.0 36.0 32 34.34402866923406 36.0 36.0 36.0 32.0 36.0 33 34.32268934531451 36.0 36.0 36.0 32.0 36.0 34 34.3036649550706 36.0 36.0 36.0 32.0 36.0 35 34.28903294822422 36.0 36.0 36.0 32.0 36.0 36 34.22022250748823 36.0 36.0 36.0 32.0 36.0 37 34.210581942661534 36.0 36.0 36.0 32.0 36.0 38 34.171951219512195 36.0 36.0 36.0 32.0 36.0 39 34.149550706033374 36.0 36.0 36.0 32.0 36.0 40 34.15355584082157 36.0 36.0 36.0 32.0 36.0 41 34.124430894308944 36.0 36.0 36.0 32.0 36.0 42 34.040569105691056 36.0 36.0 36.0 32.0 36.0 43 34.043821138211385 36.0 36.0 36.0 32.0 36.0 44 33.96918271287976 36.0 36.0 36.0 32.0 36.0 45 33.912941805733844 36.0 36.0 36.0 32.0 36.0 46 33.8783055198973 36.0 36.0 36.0 32.0 36.0 47 33.893356867779204 36.0 36.0 36.0 32.0 36.0 48 33.824176294394526 36.0 36.0 36.0 32.0 36.0 49 33.80839965768079 36.0 36.0 36.0 32.0 36.0 50 32.989375267436884 36.0 36.0 36.0 14.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 1.0 21 13.0 22 29.0 23 97.0 24 258.0 25 589.0 26 1274.0 27 2634.0 28 4827.0 29 8430.0 30 14134.0 31 23283.0 32 38285.0 33 68904.0 34 129735.0 35 174906.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.32563657642662 19.61474850390365 13.300227008684526 25.75938791098521 2 16.164237605798938 20.857474176073392 37.52706484437179 25.451223373755873 3 18.391994848084828 24.939933547140665 29.68341823581137 26.984653368963134 4 12.51155327342747 17.031236628155753 37.72999572100984 32.72721437740693 5 15.435387248609327 36.05477107402653 33.139281129653405 15.37056054771074 6 33.73833975181857 36.952289259734705 16.619383825417202 12.689987163029526 7 29.645271715875054 30.924475823705606 21.278562259306806 18.15169020111254 8 27.16837826273 33.96191698759093 19.35066324347454 19.519041506204534 9 26.98161730096107 13.968027111913667 18.655059093359807 40.39529649376546 10 15.159424816912317 26.482726749522357 32.726214647442546 25.631633786122777 11 36.96640992725717 20.453359007274283 23.848951647411212 18.73127941805734 12 24.81685922122379 23.29589216944801 29.834617030380826 22.05263157894737 13 29.106457451679297 19.660974159067862 25.841146089628108 25.391422299624733 14 22.973519412750136 20.18896060967182 25.75465501637787 31.082864961200173 15 24.212424901151945 28.70851377026171 22.537356862879346 24.541704465707 16 24.86927573192753 25.957004338933153 25.19961659920068 23.97410332993864 17 23.121737270004278 26.875053487376977 26.11510483525888 23.888104407359865 18 23.834403080872914 25.303380402225073 27.880188275566965 22.982028241335044 19 25.16923406076166 25.263157894736842 26.174796747967477 23.39281129653402 20 25.49898480741294 24.80535901873988 25.6787027785682 24.016953395278982 21 26.016474112109545 24.619169875909286 25.09028669234061 24.274069319640564 22 25.05990586221652 25.489302524604195 25.64270432178006 23.80808729139923 23 23.284587982327583 25.40506423902695 26.472897656158068 24.837450122487404 24 24.43153129252283 25.582161593167253 25.952725312155007 24.03358180215492 25 24.29128315725063 25.39506283777712 26.181551325006314 24.13210267996594 26 23.56158052838327 26.116845105137486 26.577704177257438 23.743870189221802 27 24.489660558212183 25.696588465611864 25.474715705467656 24.339035270708305 28 23.756228751639426 25.622554232127843 25.93364413796645 24.687572878266284 29 24.276254559847665 25.214647139999357 25.766428823586047 24.74266947656693 30 23.83175470539529 25.365594825723324 26.46938631418369 24.33326415469769 31 24.973682859196877 25.061406661873953 25.401389887371195 24.563520591557975 32 24.300957018671813 25.72717800376132 25.07418873786075 24.89767623970611 33 23.537139299384453 25.62512168664646 26.20558036239621 24.632158651572887 34 24.409437026228463 25.388912542549846 26.269114000423627 23.932536430798066 35 25.059050569538467 25.43517702333781 25.612328731953205 23.89344367517052 36 23.809299658516128 25.69366585931549 25.895432332274932 24.60160214989345 37 24.81707003970971 25.432185403258934 25.06268827878954 24.688056278241817 38 24.199787751189618 25.56806511245764 25.6326811817466 24.599465954606142 39 25.06675396030707 25.076595890352344 24.813645194142765 25.043004955197823 40 25.41587058428346 25.395972982051507 25.673469649738013 23.514686783927015 41 24.435967162537736 25.27508969967458 26.264834946180194 24.02410819160749 42 25.199886176670066 26.15026819087231 25.341951385456717 23.307894247000903 43 24.202499796747098 25.622060856058432 25.891210488705557 24.28422885848891 44 24.009242717615724 25.62821596294355 25.371045903357974 24.991495416082756 45 24.312042413531938 25.913461332739978 25.242298854509432 24.532197399218653 46 24.245393627673323 25.408433105974375 25.478609145136033 24.867564121216272 47 25.047765147381956 25.252946676337373 25.507551493289345 24.191736682991326 48 25.266693767517488 25.977877147564133 24.599157020903313 24.156272064015063 49 24.64109816473327 25.712347934736563 25.20036457152149 24.446189329008682 50 24.607290637021443 26.09062161687998 24.78337334240491 24.51871440369367 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 5.5 2 7.0 3 13.0 4 19.0 5 25.0 6 31.0 7 42.0 8 53.0 9 76.5 10 100.0 11 119.5 12 139.0 13 254.5 14 370.0 15 464.5 16 559.0 17 654.0 18 749.0 19 787.5 20 826.0 21 1033.0 22 1240.0 23 1525.5 24 1811.0 25 2426.0 26 3041.0 27 4122.0 28 5203.0 29 6340.0 30 7477.0 31 8736.5 32 9996.0 33 12018.0 34 14040.0 35 16423.0 36 18806.0 37 21112.5 38 23419.0 39 24134.0 40 24849.0 41 26132.5 42 27416.0 43 27140.5 44 26865.0 45 28987.0 46 31109.0 47 32719.0 48 34329.0 49 34304.5 50 34280.0 51 32930.0 52 31580.0 53 30951.0 54 30322.0 55 30212.5 56 30103.0 57 28962.0 58 27821.0 59 25044.0 60 22267.0 61 19652.0 62 17037.0 63 14775.5 64 12514.0 65 10645.5 66 8777.0 67 7464.5 68 6152.0 69 5671.0 70 5190.0 71 4165.0 72 3140.0 73 2679.0 74 2218.0 75 1705.0 76 1192.0 77 1059.5 78 927.0 79 754.0 80 581.0 81 460.5 82 340.0 83 298.5 84 257.0 85 185.0 86 113.0 87 82.0 88 51.0 89 38.0 90 25.0 91 22.5 92 20.0 93 17.5 94 15.0 95 11.0 96 7.0 97 7.0 98 7.0 99 6.5 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0036371416345742404 2 8.557980316645272E-4 3 2.139495079161318E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 8.557980316645272E-4 10 2.139495079161318E-4 11 0.0 12 0.0 13 4.278990158322636E-4 14 2.139495079161318E-4 15 0.0034231921266581087 16 8.557980316645272E-4 17 0.0 18 0.0 19 0.0 20 2.139495079161318E-4 21 0.0 22 0.0 23 0.0010697475395806588 24 8.557980316645272E-4 25 0.0012836970474967909 26 0.0025673940949935818 27 0.003209242618741977 28 0.0023534445870774497 29 0.0010697475395806588 30 0.0023534445870774497 31 0.0051347881899871635 32 0.0023534445870774497 33 0.0023534445870774497 34 0.0014976465554129225 35 8.557980316645272E-4 36 0.00599058622165169 37 0.0017115960633290544 38 0.0051347881899871635 39 0.0025673940949935818 40 0.0014976465554129225 41 0.0014976465554129225 42 0.0019255455712451862 43 4.278990158322636E-4 44 0.0010697475395806588 45 4.278990158322636E-4 46 8.557980316645272E-4 47 0.0019255455712451862 48 0.0021394950791613176 49 4.278990158322636E-4 50 0.0012836970474967909 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 467400.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.93298422744903 #Duplication Level Percentage of deduplicated Percentage of total 1 88.59602098609537 61.071881172492546 2 7.028405938994589 9.68977991473646 3 1.7732845128534145 3.667133800659122 4 0.7847455634387549 2.1637941418833715 5 0.4323265207128812 1.4900778616704478 6 0.2751796728301956 1.1381373628151077 7 0.17125700951142717 0.8263679714843906 8 0.11476706274682597 0.6328988900926085 9 0.10005841271688781 0.6207592487073132 >10 0.5932755321655426 8.038322848876838 >50 0.07809613303979988 3.7490766220023626 >100 0.051338095015166514 6.434127510929613 >500 0.0012445598791555516 0.4776426536497965 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 620 0.1326486949080017 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGGCGTTATT 584 0.12494651262302096 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 512 0.10954214805305948 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 511 0.10932819854514335 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 488 0.10440735986307231 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 2.139495079161318E-4 0.0 7 0.0 0.0 0.0 4.278990158322636E-4 0.0 8 0.0 0.0 0.0 8.557980316645272E-4 0.0 9 0.0 0.0 0.0 0.001069747539580659 0.0 10 0.0 0.0 0.0 0.001069747539580659 0.0 11 0.0 0.0 0.0 0.001069747539580659 0.0 12 0.0 0.0 0.0 0.001069747539580659 0.0 13 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 14 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 15 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 16 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 17 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 18 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 19 0.0 0.0 0.0 0.001069747539580659 2.139495079161318E-4 20 0.0 0.0 0.0 0.001069747539580659 6.418485237483953E-4 21 0.0 0.0 0.0 0.001069747539580659 6.418485237483953E-4 22 0.0 0.0 0.0 0.001069747539580659 6.418485237483953E-4 23 0.0 0.0 0.0 0.001069747539580659 8.557980316645272E-4 24 0.0 0.0 0.0 0.001069747539580659 8.557980316645272E-4 25 0.0 0.0 0.0 0.001069747539580659 8.557980316645272E-4 26 0.0 0.0 0.0 0.001069747539580659 8.557980316645272E-4 27 0.0 0.0 0.0 0.001069747539580659 8.557980316645272E-4 28 0.0 0.0 0.0 0.0012836970474967907 8.557980316645272E-4 29 0.0 0.0 0.0 0.002139495079161318 8.557980316645272E-4 30 0.0 0.0 0.0 0.0023534445870774497 8.557980316645272E-4 31 0.0 0.0 0.0 0.004920838682071031 8.557980316645272E-4 32 0.0 0.0 0.0 0.006632434745400086 8.557980316645272E-4 33 0.0 0.0 0.0 0.008985879332477536 8.557980316645272E-4 34 0.0 0.0 0.0 0.012836970474967908 8.557980316645272E-4 35 0.0 0.0 0.0 0.017543859649122806 8.557980316645272E-4 36 0.0 0.0 0.0 0.024390243902439025 8.557980316645272E-4 37 0.0 0.0 0.0 0.03423192126658109 8.557980316645272E-4 38 0.0 0.0 0.0 0.045785194694052206 8.557980316645272E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CATTAAC 35 3.2174803E-4 31.424215 2 GTACTAC 75 2.1609594E-9 29.332405 1 ATACCGT 185 0.0 28.536585 6 ACCGTCG 170 0.0 28.466642 8 GTATAGC 55 4.953725E-6 27.999115 1 GCATAAG 40 7.0269336E-4 27.499132 1 ATAGGGG 40 7.03133E-4 27.49619 3 CGTCGTA 180 0.0 26.890917 10 CCGTCGT 180 0.0 26.888039 9 TACCGTC 190 0.0 26.627888 7 GTATCAA 615 0.0 26.470707 1 GGCGTAC 45 0.0013963188 24.446287 13 GCGTACT 45 0.0013963188 24.446287 14 GTCGTAG 200 0.0 24.201824 11 TACGAAT 100 1.7389539E-9 24.199234 41 TCAGATA 200 0.0 24.196648 2 CGAATGC 105 3.0595402E-9 23.04689 43 ATACGAA 105 3.0595402E-9 23.04689 40 CTAGCGG 110 5.2350515E-9 21.999306 29 CGGGTAA 50 0.0025785654 21.999304 44 >>END_MODULE