##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063888_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3091735 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15653734877019 32.0 32.0 32.0 32.0 32.0 2 30.658396660774613 32.0 32.0 32.0 32.0 32.0 3 30.678782625289685 32.0 32.0 32.0 32.0 32.0 4 30.659283864884927 32.0 32.0 32.0 32.0 32.0 5 30.61594282821781 32.0 32.0 32.0 32.0 32.0 6 34.02952096476574 36.0 36.0 36.0 32.0 36.0 7 34.007817940412096 36.0 36.0 36.0 32.0 36.0 8 33.9503796412047 36.0 36.0 36.0 32.0 36.0 9 34.16879777859357 36.0 36.0 36.0 32.0 36.0 10 33.74471421386374 36.0 36.0 36.0 32.0 36.0 11 34.1772593705476 36.0 36.0 36.0 32.0 36.0 12 33.905525538249556 36.0 36.0 36.0 32.0 36.0 13 34.04986682235056 36.0 36.0 36.0 32.0 36.0 14 33.89505277780923 36.0 36.0 36.0 32.0 36.0 15 33.79610251201995 36.0 36.0 36.0 32.0 36.0 16 33.80941898319229 36.0 36.0 36.0 32.0 36.0 17 33.728866154440794 36.0 36.0 36.0 32.0 36.0 18 33.74152118470697 36.0 36.0 36.0 32.0 36.0 19 33.71887014896167 36.0 36.0 36.0 32.0 36.0 20 33.692997944519824 36.0 36.0 36.0 27.0 36.0 21 33.65090410400633 36.0 36.0 36.0 27.0 36.0 22 33.61556439992432 36.0 36.0 36.0 27.0 36.0 23 33.56383551630395 36.0 36.0 36.0 27.0 36.0 24 33.53461664728704 36.0 36.0 36.0 27.0 36.0 25 32.76427151744894 36.0 32.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 6.0 4 29.0 5 33.0 6 120.0 7 52.0 8 166.0 9 163.0 10 222.0 11 91.0 12 188.0 13 135.0 14 607.0 15 1301.0 16 2100.0 17 2660.0 18 3213.0 19 3980.0 20 5196.0 21 6590.0 22 8918.0 23 11930.0 24 17035.0 25 23159.0 26 33225.0 27 45994.0 28 65525.0 29 92197.0 30 132267.0 31 197116.0 32 303064.0 33 448316.0 34 831367.0 35 854769.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.684580405393596 18.39886158985267 12.440295267042988 25.47626273771074 2 15.684237356335966 20.455183549683852 38.8152302311951 25.045348862785076 3 17.919805051669137 25.37876521295304 29.148740931742534 27.552688803635295 4 12.251005938595696 16.771551668370186 36.88372514264274 34.09371725039138 5 13.924622229697931 37.144294265395864 34.21396444115226 14.717119063753945 6 32.16036561242767 36.381095575702744 18.190887444073987 13.267651367795608 7 29.077090007033064 31.19920520563137 21.849307401797542 17.87439738553803 8 27.36303937139838 33.476155179392244 20.063368768637993 19.097436680571388 9 27.076077681677525 15.292322338125691 19.27483985119112 38.356760129005664 10 15.52333415745783 27.33228311394794 32.22716193528595 24.91722079330828 11 35.23938687602481 21.774949056810758 23.803939347752433 19.181724719412 12 24.72735769492412 24.096602335445343 29.578736974691466 21.597302994939067 13 28.781138386933495 20.588715033030024 25.87180363479137 24.75834294524511 14 23.218498833919448 20.543827864114558 26.187101071318303 30.050572230647692 15 24.419932628464007 28.099801005103835 23.181724184465583 24.298542181966575 16 24.737671991440315 26.487863102030722 24.81884140054126 23.9556235059877 17 23.12353800885706 26.608368252834012 26.28224794851979 23.98584578978914 18 23.725276123144624 25.636443496997707 27.462742027523788 23.175538352333877 19 24.75012526104142 25.804292407821467 26.18486587682082 23.260716454316295 20 24.949675394561417 25.1300315299554 26.19640498303416 23.723888092449027 21 25.62881682230649 25.079815847426794 25.183841854575917 24.1075254756908 22 24.753355593908076 25.556989099741443 25.469595412543516 24.22005989380696 23 23.386444691745016 25.433374830628242 26.155175282372582 25.025005195254156 24 23.898717411752063 25.99780419959774 25.954011187447684 24.149467201202512 25 24.018431646344403 25.455604183113667 26.034214941143606 24.491749229398323 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 289.0 1 289.0 2 883.5 3 1478.0 4 1478.0 5 1478.0 6 3789.0 7 6100.0 8 6100.0 9 6100.0 10 6283.0 11 6466.0 12 6466.0 13 6466.0 14 8367.0 15 10268.0 16 10268.0 17 10268.0 18 17831.5 19 25395.0 20 25395.0 21 25395.0 22 41076.0 23 56757.0 24 56757.0 25 56757.0 26 84333.5 27 111910.0 28 111910.0 29 111910.0 30 139949.5 31 167989.0 32 167989.0 33 167989.0 34 199674.5 35 231360.0 36 231360.0 37 231360.0 38 257092.0 39 282824.0 40 282824.0 41 282824.0 42 314023.0 43 345222.0 44 345222.0 45 345222.0 46 386115.5 47 427009.0 48 427009.0 49 427009.0 50 416569.0 51 406129.0 52 406129.0 53 406129.0 54 369067.0 55 332005.0 56 332005.0 57 332005.0 58 295956.5 59 259908.0 60 259908.0 61 259908.0 62 223386.0 63 186864.0 64 186864.0 65 186864.0 66 151017.0 67 115170.0 68 115170.0 69 115170.0 70 86417.0 71 57664.0 72 57664.0 73 57664.0 74 43628.5 75 29593.0 76 29593.0 77 29593.0 78 23846.0 79 18099.0 80 18099.0 81 18099.0 82 12360.5 83 6622.0 84 6622.0 85 6622.0 86 5084.0 87 3546.0 88 3546.0 89 3546.0 90 2476.0 91 1406.0 92 1406.0 93 1406.0 94 902.5 95 399.0 96 399.0 97 399.0 98 831.0 99 1263.0 100 1263.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03586982713589619 2 0.004754611892675149 3 0.0014231491379435818 4 0.0030727083660145515 5 0.007762631661510446 6 0.012096767672520447 7 0.02008580942415828 8 0.030338952077069995 9 0.04295322852702447 10 0.051330401861737825 11 0.04942208824494984 12 0.05786395017684245 13 0.05883427913453126 14 0.061357134424522154 15 0.05517937339390342 16 0.06148651161888066 17 0.05728175280222917 18 0.07316280340973597 19 0.07073698101551394 20 0.07413313236742476 21 0.06866694590577782 22 0.0733245249026841 23 0.07688239774754305 24 0.07118980119576872 25 0.07329218060409447 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3091735.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.6445501882656 #Duplication Level Percentage of deduplicated Percentage of total 1 73.54991727384615 35.042527248965456 2 14.626800743256121 13.937746842116535 3 5.076853595564738 7.256532177970825 4 2.2222160102837787 4.235059289245314 5 1.2133450605755152 2.8904639817137148 6 0.7192773097745383 2.0561786330900187 7 0.4612335924078106 1.5382686929391578 8 0.3418841084913004 1.303113165246736 9 0.25279451600580416 1.0839852904641163 >10 1.3375210873493675 11.376143236179152 >50 0.1010723577987835 3.3492369629807937 >100 0.08050637550151964 7.988982679026399 >500 0.011597756191767051 3.764788588060329 >1k 0.004843768762218752 3.762188259093826 >5k 1.3644419048503524E-4 0.4147849529076531 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 7490 0.2422587964363052 No Hit TATCAACGCAGAGTACTTTTTTTTT 5271 0.1704867978659232 No Hit GTACATGGAAGCAGTGGTATCAACG 4835 0.15638468368084588 No Hit TCCATGTACTCTGCGTTGATACCAC 4589 0.14842798622779768 No Hit GTACTTTTTTTTTTTTTTTTTTTTT 3887 0.1257222886178796 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.468859717925372E-5 0.0 5 0.0 0.0 0.0 6.468859717925372E-5 0.0 6 0.0 0.0 0.0 6.468859717925372E-5 0.0 7 0.0 0.0 0.0 6.468859717925372E-5 0.0 8 0.0 0.0 0.0 6.468859717925372E-5 0.0 9 0.0 0.0 0.0 9.703289576888058E-5 0.0 10 0.0 0.0 0.0 1.2937719435850744E-4 0.0 11 0.0 0.0 0.0 1.2937719435850744E-4 0.0 12 0.0 0.0 0.0 1.2937719435850744E-4 6.468859717925372E-5 13 0.0 0.0 0.0 1.2937719435850744E-4 9.703289576888058E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACCAT 290 0.0 13.432053 10 ACCGTCG 360 0.0 11.875516 8 CGTCGTA 365 0.0 11.713216 10 CGAGACT 205 0.0 11.58212 4 CCGTCGT 385 0.0 10.857614 9 CCGACCA 335 0.0 10.7765875 9 TTTGCGC 300 0.0 10.768877 17 TATACTG 285 0.0 10.664196 5 TACCGTC 410 0.0 10.658827 7 GTCTAGG 205 0.0 10.656585 1 CGTCTTA 340 0.0 10.619655 15 ATACCGT 445 0.0 10.460283 6 GTCGTAG 415 0.0 10.30232 11 TTGCGCG 335 0.0 10.210887 18 ATTTGCG 330 0.0 10.077662 16 GCATCGC 315 0.0 9.953619 14 ATCGCCA 325 0.0 9.940342 16 CGACCCG 335 0.0 9.923074 5 AACTATC 115 1.0248852E-5 9.914919 19 GCACCGT 115 1.027649E-5 9.912672 6 >>END_MODULE