##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063888_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3091735 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.072393655989273 32.0 32.0 32.0 32.0 32.0 2 30.879063050358457 32.0 32.0 32.0 32.0 32.0 3 31.19834235469728 32.0 32.0 32.0 32.0 32.0 4 31.385346092080983 32.0 32.0 32.0 32.0 32.0 5 31.22330827189264 32.0 32.0 32.0 32.0 32.0 6 34.84675853525609 36.0 36.0 36.0 32.0 36.0 7 34.885666138915525 36.0 36.0 36.0 32.0 36.0 8 34.805549634752005 36.0 36.0 36.0 32.0 36.0 9 35.00986339385491 36.0 36.0 36.0 36.0 36.0 10 34.735305580847 36.0 36.0 36.0 32.0 36.0 11 35.021583027005875 36.0 36.0 36.0 36.0 36.0 12 34.88661641440809 36.0 36.0 36.0 32.0 36.0 13 34.956455841137746 36.0 36.0 36.0 36.0 36.0 14 34.888395674273504 36.0 36.0 36.0 32.0 36.0 15 34.817690714113596 36.0 36.0 36.0 32.0 36.0 16 34.85009452621263 36.0 36.0 36.0 32.0 36.0 17 34.80827043714937 36.0 36.0 36.0 32.0 36.0 18 34.80880153053221 36.0 36.0 36.0 32.0 36.0 19 34.80689515757334 36.0 36.0 36.0 32.0 36.0 20 34.800307270836605 36.0 36.0 36.0 32.0 36.0 21 34.80129506571553 36.0 36.0 36.0 32.0 36.0 22 34.77245074367629 36.0 36.0 36.0 32.0 36.0 23 34.71645273608508 36.0 36.0 36.0 32.0 36.0 24 34.687329282749005 36.0 36.0 36.0 32.0 36.0 25 34.65841509702481 36.0 36.0 36.0 32.0 36.0 26 34.58850418939527 36.0 36.0 36.0 32.0 36.0 27 34.5684853326692 36.0 36.0 36.0 32.0 36.0 28 34.54256364145051 36.0 36.0 36.0 32.0 36.0 29 34.51032801970415 36.0 36.0 36.0 32.0 36.0 30 34.490946992546256 36.0 36.0 36.0 32.0 36.0 31 34.4807866780303 36.0 36.0 36.0 32.0 36.0 32 34.431127506076685 36.0 36.0 36.0 32.0 36.0 33 34.40729881441973 36.0 36.0 36.0 32.0 36.0 34 34.384061053098016 36.0 36.0 36.0 32.0 36.0 35 34.34620463914275 36.0 36.0 36.0 32.0 36.0 36 34.301282289717584 36.0 36.0 36.0 32.0 36.0 37 34.28112273529264 36.0 36.0 36.0 32.0 36.0 38 34.23724413638297 36.0 36.0 36.0 32.0 36.0 39 34.209676120366076 36.0 36.0 36.0 32.0 36.0 40 34.19158757137983 36.0 36.0 36.0 32.0 36.0 41 34.17018437867411 36.0 36.0 36.0 32.0 36.0 42 34.08927091099334 36.0 36.0 36.0 32.0 36.0 43 34.0880059254755 36.0 36.0 36.0 32.0 36.0 44 34.02349813292536 36.0 36.0 36.0 32.0 36.0 45 33.95737571298963 36.0 36.0 36.0 32.0 36.0 46 33.95333364599489 36.0 36.0 36.0 32.0 36.0 47 33.909779136957084 36.0 36.0 36.0 32.0 36.0 48 33.86308140898233 36.0 36.0 36.0 32.0 36.0 49 33.848942745739855 36.0 36.0 36.0 32.0 36.0 50 33.1214745118841 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 2.0 18 1.0 19 11.0 20 24.0 21 78.0 22 274.0 23 798.0 24 2276.0 25 5427.0 26 11325.0 27 21642.0 28 37446.0 29 60319.0 30 91205.0 31 139914.0 32 215419.0 33 363208.0 34 717362.0 35 1425003.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.359894784101684 19.55677220602753 13.26995408125638 25.813378928614405 2 15.137790347527563 21.398047563076418 37.828837354927316 25.635324734468707 3 17.42439262949631 25.947390602475185 29.616631988120563 27.011584779907942 4 12.1380713418194 17.66978735240892 37.14729755299209 33.04484375277959 5 14.086039068678266 37.284566756206466 33.54569521643996 15.083698958675306 6 32.46750684406908 36.897359664239545 17.586346535012133 13.048786956679242 7 29.042343228751243 31.391510395137484 21.700120385518286 17.86602599059298 8 27.43084384657805 33.68377302711908 19.728275547548545 19.157107578754324 9 27.089645241515292 15.029454583209482 18.998327462254693 38.88257271302054 10 15.413835028785105 27.512345137938542 32.21415511127686 24.859664721999494 11 35.60605006965349 21.661475942456867 23.615363939900373 19.117110047989268 12 24.682952894056502 24.09965543596423 29.52007822150231 21.697313448476955 13 29.03566779063468 20.49920351907107 25.78683421067527 24.678294479618984 14 23.329470338441695 20.36724434774199 26.045361673031497 30.257923640784817 15 24.59889986550749 28.121581486999382 23.02713591765099 24.252382729842132 16 24.879508544292435 26.4306874538484 24.77031341524909 23.919490586610078 17 23.3260612568671 26.620683855505078 26.084803516472142 23.968451371155677 18 23.874608470872563 25.599277296421025 27.354123459920743 23.17199077278567 19 24.83586077073229 25.761166464784335 26.176467258675146 23.22650550580823 20 25.157630805914383 25.026118164722654 26.157236850191385 23.65901417917158 21 25.765144813510858 25.005603649730652 25.21179855323952 24.017452983518965 22 24.903363196862855 25.467707248787168 25.45716299380509 24.171766560544885 23 23.598642307378814 25.239543347448475 26.139302575010127 25.02251177016259 24 24.191309320424903 25.91122240457272 25.786340704189183 24.111127570813196 25 24.35198620296163 25.20213942072881 26.034308876927025 24.411565499382537 26 23.851830527607916 25.807584758029435 26.419501907591386 23.921082806771263 27 24.56393501163972 25.91273233752829 25.470141536546652 24.053191114285337 28 23.860170622245583 25.376137144705453 26.206186067197674 24.557506165851294 29 24.18015129696979 25.415309793936476 26.11434992373049 24.29018898536324 30 24.241049075635036 25.456295631180385 26.300476511465128 24.00217878171945 31 24.506211275555508 25.17749158594946 25.748466386656553 24.567830751838475 32 23.983615189847214 25.72728296013383 25.604791496045472 24.684310353973483 33 23.64354023497112 25.61988657057446 26.12428330315492 24.612289891299497 34 24.148210058913218 25.510744045443463 26.424587908266933 23.916457987376386 35 24.79830382109259 25.510511360420228 25.883580153671737 23.807604664815447 36 24.065793980907184 25.804286487365964 25.834433382316647 24.295486149410213 37 24.785760539572276 25.56605988936595 25.486328588700992 24.161850982360782 38 24.14485092690141 25.708053955039194 25.795971388988715 24.351123729070686 39 24.554463964280135 25.459169695560213 25.487601455939018 24.49876488422063 40 24.938787286386226 25.482893108532 25.786546981930204 23.79177262315157 41 24.008825035361273 25.607740051538673 26.169347913207762 24.214086999892288 42 24.90410562790558 26.083657347794066 25.631411758579386 23.38082526572097 43 24.188190133398972 25.43763097554972 25.860860503094894 24.513318387956414 44 23.98029302354015 25.65338712040669 25.814269638971737 24.55205021708143 45 24.197843449730037 25.82041513123699 25.69009835051753 24.291643068515448 46 24.06123987656026 25.512216374687025 25.83873460359005 24.587809145162662 47 24.545498358014065 25.42010290188224 25.933480243608415 24.100918496495275 48 24.638360869001293 26.23506195808308 25.09054118350273 24.0360359894129 49 24.148841132752384 25.799213772501183 25.742319985664963 24.309625109081466 50 24.045917943234265 26.33731918055147 25.149683554846558 24.467079321367706 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 50.0 1 51.5 2 53.0 3 203.5 4 354.0 5 393.0 6 432.0 7 454.0 8 476.0 9 664.5 10 853.0 11 1245.5 12 1638.0 13 3072.5 14 4507.0 15 6015.0 16 7523.0 17 8304.0 18 9085.0 19 9497.5 20 9910.0 21 11268.0 22 12626.0 23 14618.0 24 16610.0 25 20403.0 26 24196.0 27 30525.0 28 36854.0 29 44445.5 30 52037.0 31 59031.5 32 66026.0 33 77300.0 34 88574.0 35 101282.0 36 113990.0 37 127573.5 38 141157.0 39 149110.0 40 157063.0 41 167564.5 42 178066.0 43 180470.0 44 182874.0 45 197279.0 46 211684.0 47 223923.5 48 236163.0 49 236235.0 50 236307.0 51 226381.0 52 216455.0 53 209804.5 54 203154.0 55 199459.0 56 195764.0 57 188219.5 58 180675.0 59 162831.0 60 144987.0 61 128059.5 62 111132.0 63 95428.5 64 79725.0 65 66935.5 66 54146.0 67 45969.5 68 37793.0 69 33877.5 70 29962.0 71 23426.5 72 16891.0 73 14408.5 74 11926.0 75 9266.5 76 6607.0 77 5832.5 78 5058.0 79 4227.5 80 3397.0 81 2749.5 82 2102.0 83 1737.0 84 1372.0 85 1008.5 86 645.0 87 472.5 88 300.0 89 239.0 90 178.0 91 144.0 92 110.0 93 86.0 94 62.0 95 71.5 96 81.0 97 71.0 98 61.0 99 52.5 100 44.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0060483838362602235 2 2.910986873066417E-4 3 1.9406579153776116E-4 4 0.0 5 0.0 6 2.2641009012738802E-4 7 3.234429858962686E-5 8 0.0 9 8.409517633302983E-4 10 0.0010350175548680595 11 6.468859717925372E-5 12 6.468859717925372E-5 13 3.234429858962686E-4 14 1.9406579153776116E-4 15 0.003654905740627835 16 7.115745689717909E-4 17 0.0 18 3.5578728448589544E-4 19 0.0 20 5.498530760236565E-4 21 0.0 22 1.2937719435850744E-4 23 6.145416732029103E-4 24 2.910986873066417E-4 25 0.0018436250196087309 26 0.004528201802547761 27 0.005369153565878059 28 0.0035578728448589546 29 0.0021670680055049995 30 0.0032020855603730595 31 0.005821973746132835 32 0.0029433311716560444 33 0.00391366012934485 34 0.0022317566026842533 35 0.002587543887170149 36 0.006662925509463133 37 0.003266774157552313 38 0.006404171120746119 39 0.003946004427934477 40 0.0018436250196087309 41 0.0024581666928116413 42 0.0016819035266605966 43 0.0010350175548680595 44 0.0012290833464058206 45 0.0012290833464058206 46 7.762631661510447E-4 47 0.0016819035266605966 48 0.0015525263323020893 49 2.910986873066417E-4 50 0.0014878377351228355 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3091735.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.02048969677392 #Duplication Level Percentage of deduplicated Percentage of total 1 76.13620678108863 40.36778967188159 2 13.481570665685066 14.295989571525695 3 4.47905659467811 7.12445322088194 4 2.0024581055101605 4.246852374056916 5 1.0537301334752784 2.7934643842553113 6 0.6414140530706439 2.0404852315318847 7 0.4183843233086833 1.5528059192295842 8 0.2955600548206354 1.253659107311635 9 0.21961664235246098 1.0479763730779867 >10 1.1224784066411664 10.554488953531264 >50 0.07517276269487741 2.7606732597796833 >100 0.06366591418500034 6.956282787233647 >500 0.008167700063978772 2.976328291429633 >1k 0.002517862425459601 2.028750854273183 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 3.234429858962686E-5 0.0 4 0.0 0.0 0.0 3.234429858962686E-5 0.0 5 0.0 0.0 0.0 3.234429858962686E-5 0.0 6 0.0 0.0 0.0 3.234429858962686E-5 0.0 7 0.0 0.0 0.0 3.234429858962686E-5 0.0 8 0.0 0.0 0.0 3.234429858962686E-5 0.0 9 0.0 0.0 0.0 6.468859717925372E-5 0.0 10 0.0 0.0 0.0 9.703289576888058E-5 0.0 11 0.0 0.0 0.0 9.703289576888058E-5 0.0 12 0.0 0.0 0.0 9.703289576888058E-5 1.617214929481343E-4 13 0.0 0.0 0.0 9.703289576888058E-5 2.2641009012738802E-4 14 0.0 0.0 0.0 9.703289576888058E-5 2.2641009012738802E-4 15 0.0 3.234429858962686E-5 0.0 1.2937719435850744E-4 2.587543887170149E-4 16 0.0 3.234429858962686E-5 0.0 1.2937719435850744E-4 2.910986873066417E-4 17 0.0 3.234429858962686E-5 0.0 1.2937719435850744E-4 3.234429858962686E-4 18 0.0 3.234429858962686E-5 0.0 1.2937719435850744E-4 3.5578728448589544E-4 19 0.0 3.234429858962686E-5 0.0 1.617214929481343E-4 3.5578728448589544E-4 20 0.0 3.234429858962686E-5 0.0 2.910986873066417E-4 3.5578728448589544E-4 21 0.0 3.234429858962686E-5 0.0 4.2047588166514916E-4 3.5578728448589544E-4 22 0.0 3.234429858962686E-5 0.0 6.468859717925372E-4 3.8813158307552233E-4 23 0.0 3.234429858962686E-5 0.0 0.0013261162421747013 3.8813158307552233E-4 24 0.0 3.234429858962686E-5 0.0 0.0023287894984531337 3.8813158307552233E-4 25 0.0 3.234429858962686E-5 0.0 0.0026198881857597755 3.8813158307552233E-4 26 0.0 3.234429858962686E-5 0.0 0.0031373969631938053 4.851644788444029E-4 27 0.0 3.234429858962686E-5 0.0 0.004107725920882611 5.821973746132834E-4 28 0.0 6.468859717925372E-5 0.0 0.005821973746132835 5.821973746132834E-4 29 0.0 9.703289576888058E-5 0.0 0.008409517633302983 5.821973746132834E-4 30 0.0 9.703289576888058E-5 0.0 0.015169476038534998 5.821973746132834E-4 31 0.0 9.703289576888058E-5 0.0 0.029400967417970814 5.821973746132834E-4 32 0.0 9.703289576888058E-5 0.0 0.04748143032957223 5.821973746132834E-4 33 0.0 9.703289576888058E-5 0.0 0.06410639980464043 5.821973746132834E-4 34 0.0 1.2937719435850744E-4 0.0 0.0852595710822564 7.115745689717909E-4 35 0.0 1.2937719435850744E-4 0.0 0.10883856475409438 7.115745689717909E-4 36 0.0 1.2937719435850744E-4 0.0 0.1424442909887167 7.115745689717909E-4 37 0.0 1.2937719435850744E-4 0.0 0.1928043638927657 7.115745689717909E-4 38 0.0 1.2937719435850744E-4 0.0 0.26363837780404853 7.115745689717909E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAC 480 0.0 18.79155 1 TAACGGC 380 0.0 17.369997 36 TAGGACG 1410 0.0 16.850414 4 AGGACGT 1480 0.0 16.053434 5 CGTCGTA 565 0.0 15.965018 10 TTAGGAC 1040 0.0 15.652737 3 GTAGGAC 1525 0.0 15.579223 3 TAGGACC 1575 0.0 15.504164 4 ATACCGT 640 0.0 15.468154 6 ACCGTCG 630 0.0 15.364487 8 AACGAAT 280 0.0 14.929687 31 GGACGTG 1565 0.0 14.900384 6 TTAACGG 460 0.0 14.827434 35 GTATTAG 950 0.0 14.82096 1 GTATCAA 9115 0.0 14.674621 1 CCGTCGT 630 0.0 14.667049 9 GTATAGA 435 0.0 14.666575 1 GTCCTAC 1385 0.0 14.6136265 1 ATTTCGT 575 0.0 14.538334 42 TGTAGGA 1675 0.0 14.446503 2 >>END_MODULE