Basic Statistics
Measure | Value |
---|---|
Filename | SRR4063886_2.fastq |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 2583587 |
Sequences flagged as poor quality | 0 |
Sequence length | 25 |
%GC | 50 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GTATCAACGCAGAGTACTTTTTTTT | 4264 | 0.16504185847041342 | No Hit |
TATCAACGCAGAGTACTTTTTTTTT | 2679 | 0.10369304381853602 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGCTA | 95 | 4.8930815E-9 | 14.002798 | 16 |
CGCATCG | 260 | 0.0 | 13.155201 | 13 |
AACCGCG | 175 | 0.0 | 12.485065 | 7 |
TCGCGTA | 85 | 3.9424813E-6 | 12.295146 | 9 |
GTATCAA | 3090 | 0.0 | 12.17271 | 1 |
ACGCGCG | 120 | 1.0009899E-8 | 11.876223 | 13 |
CGCGGTC | 165 | 7.2759576E-12 | 11.516561 | 10 |
ATCGCCA | 290 | 0.0 | 11.467808 | 16 |
CGTCTTA | 135 | 4.7202775E-9 | 11.261291 | 15 |
GTATTAG | 300 | 0.0 | 11.08147 | 1 |
GGTTCTA | 430 | 0.0 | 11.047649 | 13 |
CGCGTAA | 95 | 1.3592051E-5 | 11.001347 | 10 |
CGTCCAA | 105 | 3.4634286E-6 | 10.85847 | 10 |
CCGATCA | 70 | 0.0014909412 | 10.85805 | 9 |
GTGTTAG | 170 | 1.4006218E-10 | 10.615862 | 1 |
GCATATA | 190 | 9.094947E-12 | 10.498234 | 1 |
ATACCGT | 380 | 0.0 | 10.4978285 | 6 |
CGCGCGC | 145 | 1.4406396E-8 | 10.48465 | 14 |
CGACCCG | 245 | 0.0 | 10.466614 | 5 |
GCGTTAT | 165 | 9.331416E-10 | 10.361894 | 1 |