##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063886_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2583587 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.217312209730114 32.0 32.0 32.0 32.0 32.0 2 30.68354810579245 32.0 32.0 32.0 32.0 32.0 3 30.713155779155105 32.0 32.0 32.0 32.0 32.0 4 30.758402562019395 32.0 32.0 32.0 32.0 32.0 5 30.59167699791027 32.0 32.0 32.0 32.0 32.0 6 34.2947843444018 36.0 36.0 36.0 32.0 36.0 7 34.228919715109264 36.0 36.0 36.0 32.0 36.0 8 34.171422909311744 36.0 36.0 36.0 32.0 36.0 9 34.37652922080812 36.0 36.0 36.0 32.0 36.0 10 33.96280287832382 36.0 36.0 36.0 32.0 36.0 11 34.36201993584888 36.0 36.0 36.0 32.0 36.0 12 34.11963792974651 36.0 36.0 36.0 32.0 36.0 13 34.231330704172144 36.0 36.0 36.0 32.0 36.0 14 34.1041021649358 36.0 36.0 36.0 32.0 36.0 15 34.01901697136578 36.0 36.0 36.0 32.0 36.0 16 34.025810626853286 36.0 36.0 36.0 32.0 36.0 17 33.9353124164195 36.0 36.0 36.0 32.0 36.0 18 33.932259296861304 36.0 36.0 36.0 32.0 36.0 19 33.962327570157306 36.0 36.0 36.0 32.0 36.0 20 33.943271505856 36.0 36.0 36.0 32.0 36.0 21 33.93605169866546 36.0 36.0 36.0 32.0 36.0 22 33.90504171138808 36.0 36.0 36.0 32.0 36.0 23 33.82890454240558 36.0 36.0 36.0 32.0 36.0 24 33.82301931384544 36.0 36.0 36.0 32.0 36.0 25 33.371770333261466 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 17.0 5 26.0 6 100.0 7 32.0 8 127.0 9 163.0 10 241.0 11 85.0 12 165.0 13 114.0 14 261.0 15 415.0 16 748.0 17 966.0 18 1377.0 19 1921.0 20 2894.0 21 4622.0 22 7223.0 23 11006.0 24 16331.0 25 23514.0 26 33101.0 27 43911.0 28 58076.0 29 77290.0 30 101563.0 31 136741.0 32 190004.0 33 264009.0 34 541776.0 35 1064761.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.64499029260046 16.837982068996492 11.32563504669387 26.191392591709178 2 16.863851386266962 19.487553266969854 37.36373352057657 26.284861826186624 3 18.94083722010412 23.88310657815796 28.031429622031702 29.144626579706216 4 12.90790062949414 15.500969033130598 35.44474304848882 36.146387288886444 5 14.94288646233611 36.425930076415895 33.403087370996644 15.22809609025135 6 34.487024793740346 34.805380615985996 17.114412607571865 13.593181982701791 7 30.53194112848808 30.044222931891728 20.85473407589248 18.56910186372771 8 28.423112485035084 32.63098267399954 19.2361273516015 19.709777489363876 9 27.727823317657702 14.307848039306803 18.038710446910414 39.925618196125086 10 15.940259317780464 26.717709204696842 31.516017597670164 25.82601387985253 11 37.082664010546 20.839032581368222 22.638536262708097 19.439767145377683 12 25.385189184415978 23.068360768372152 28.63266069656674 22.913789350645125 13 29.809090324614612 19.484506695316803 24.86779392661527 25.838609053453315 14 23.96892352847082 19.191723579131402 25.0491791087843 31.79017378361347 15 25.440794143993596 26.789385852838443 21.955454105009835 25.814365898158126 16 25.976598810187767 25.31910361281527 23.392088058499102 25.312209518497863 17 24.536191795953048 25.453622277975857 24.869887381612816 25.140298544458272 18 25.153518243425143 24.73932015424453 25.52750894304534 24.57965265928498 19 26.023954141542553 24.57075481381719 24.810443420048085 24.594847624592177 20 26.194524971219536 24.191203015790133 24.48671605183118 25.127555961159153 21 26.821745361583453 23.944765077274663 24.08506023163032 25.14842932951156 22 26.204778675227647 24.10653554567724 24.297693400618833 25.390992378476284 23 24.83659801581783 23.979117704822396 24.969775523461593 26.21450875589818 24 25.29724784288085 24.54510311873955 24.66386281202502 25.49378622635458 25 25.330839288259753 24.16490291352393 24.846220351903614 25.658037446312697 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 147.0 1 147.0 2 380.0 3 613.0 4 613.0 5 613.0 6 1649.5 7 2686.0 8 2686.0 9 2686.0 10 2920.5 11 3155.0 12 3155.0 13 3155.0 14 4115.5 15 5076.0 16 5076.0 17 5076.0 18 8811.5 19 12547.0 20 12547.0 21 12547.0 22 21060.5 23 29574.0 24 29574.0 25 29574.0 26 45749.5 27 61925.0 28 61925.0 29 61925.0 30 80579.0 31 99233.0 32 99233.0 33 99233.0 34 125788.0 35 152343.0 36 152343.0 37 152343.0 38 179592.0 39 206841.0 40 206841.0 41 206841.0 42 238485.5 43 270130.0 44 270130.0 45 270130.0 46 304618.0 47 339106.0 48 339106.0 49 339106.0 50 349521.5 51 359937.0 52 359937.0 53 359937.0 54 341449.5 55 322962.0 56 322962.0 57 322962.0 58 295980.0 59 268998.0 60 268998.0 61 268998.0 62 234282.5 63 199567.0 64 199567.0 65 199567.0 66 161908.5 67 124250.0 68 124250.0 69 124250.0 70 93258.0 71 62266.0 72 62266.0 73 62266.0 74 46673.0 75 31080.0 76 31080.0 77 31080.0 78 24292.5 79 17505.0 80 17505.0 81 17505.0 82 12117.0 83 6729.0 84 6729.0 85 6729.0 86 5043.0 87 3357.0 88 3357.0 89 3357.0 90 2446.5 91 1536.0 92 1536.0 93 1536.0 94 1086.0 95 636.0 96 636.0 97 636.0 98 1012.0 99 1388.0 100 1388.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03951870016376457 2 0.005341410991772292 3 0.0014321174398230058 4 0.0032512936471657426 5 0.00867011639244198 6 0.012153645300119562 7 0.020823761692561546 8 0.03402246566498438 9 0.04780175778868682 10 0.05523328612506565 11 0.05322058053396305 12 0.06227775569392477 13 0.06320669673597212 14 0.06572257872485036 15 0.05751693285343207 16 0.06452269654553922 17 0.06165846166589319 18 0.07632798895489101 19 0.07369598933575684 20 0.07644410658514693 21 0.0730379894309733 22 0.07551516554309957 23 0.08012116487658438 24 0.07365728345900487 25 0.07628928307813904 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2583587.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.397743221203314 #Duplication Level Percentage of deduplicated Percentage of total 1 75.13431222934493 37.865997748362425 2 13.634299440171175 13.742758443734862 3 4.557416239229059 6.890504801304247 4 2.03062748505607 4.093561702790947 5 1.1639368498215577 2.932989524150158 6 0.7461327287843587 2.2562043404525904 7 0.47466989048205055 1.674560387874576 8 0.35483132500531017 1.4306158403565572 9 0.26267643880131136 1.1914469741671758 >10 1.4737127554507592 13.366006895814142 >50 0.09280781751454101 3.2451831533047675 >100 0.06446392019445506 6.699907472291759 >500 0.007024977810253682 2.3933308680345946 >1k 0.0030879023341755206 2.21693184736135 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 4264 0.16504185847041342 No Hit TATCAACGCAGAGTACTTTTTTTTT 2679 0.10369304381853602 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.870587675197313E-5 0.0 5 0.0 0.0 0.0 3.870587675197313E-5 0.0 6 0.0 0.0 0.0 3.870587675197313E-5 0.0 7 0.0 0.0 0.0 3.870587675197313E-5 0.0 8 0.0 0.0 0.0 3.870587675197313E-5 0.0 9 0.0 0.0 0.0 3.870587675197313E-5 0.0 10 0.0 0.0 0.0 1.5482350700789252E-4 0.0 11 0.0 0.0 0.0 1.5482350700789252E-4 0.0 12 0.0 0.0 0.0 1.5482350700789252E-4 1.9352938375986564E-4 13 0.0 0.0 0.0 1.5482350700789252E-4 1.9352938375986564E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCTA 95 4.8930815E-9 14.002798 16 CGCATCG 260 0.0 13.155201 13 AACCGCG 175 0.0 12.485065 7 TCGCGTA 85 3.9424813E-6 12.295146 9 GTATCAA 3090 0.0 12.17271 1 ACGCGCG 120 1.0009899E-8 11.876223 13 CGCGGTC 165 7.2759576E-12 11.516561 10 ATCGCCA 290 0.0 11.467808 16 CGTCTTA 135 4.7202775E-9 11.261291 15 GTATTAG 300 0.0 11.08147 1 GGTTCTA 430 0.0 11.047649 13 CGCGTAA 95 1.3592051E-5 11.001347 10 CGTCCAA 105 3.4634286E-6 10.85847 10 CCGATCA 70 0.0014909412 10.85805 9 GTGTTAG 170 1.4006218E-10 10.615862 1 GCATATA 190 9.094947E-12 10.498234 1 ATACCGT 380 0.0 10.4978285 6 CGCGCGC 145 1.4406396E-8 10.48465 14 CGACCCG 245 0.0 10.466614 5 GCGTTAT 165 9.331416E-10 10.361894 1 >>END_MODULE