##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063886_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2583587 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.320405699517764 32.0 32.0 32.0 32.0 32.0 2 31.382808862252364 32.0 32.0 32.0 32.0 32.0 3 31.478903942464488 32.0 32.0 32.0 32.0 32.0 4 31.57016969043427 32.0 32.0 32.0 32.0 32.0 5 31.51390257034116 32.0 32.0 32.0 32.0 32.0 6 35.11895670631568 36.0 36.0 36.0 36.0 36.0 7 35.133936654736225 36.0 36.0 36.0 36.0 36.0 8 35.08575596641413 36.0 36.0 36.0 36.0 36.0 9 35.18937508200808 36.0 36.0 36.0 36.0 36.0 10 35.049840396317215 36.0 36.0 36.0 36.0 36.0 11 35.19246381097288 36.0 36.0 36.0 36.0 36.0 12 35.10210571581294 36.0 36.0 36.0 36.0 36.0 13 35.14268611817601 36.0 36.0 36.0 36.0 36.0 14 35.089122603574026 36.0 36.0 36.0 36.0 36.0 15 35.0567915847231 36.0 36.0 36.0 36.0 36.0 16 35.073169202353164 36.0 36.0 36.0 36.0 36.0 17 35.04004122949991 36.0 36.0 36.0 36.0 36.0 18 35.037056232284804 36.0 36.0 36.0 36.0 36.0 19 35.03727375931215 36.0 36.0 36.0 36.0 36.0 20 35.02872014760873 36.0 36.0 36.0 36.0 36.0 21 35.021811535667275 36.0 36.0 36.0 36.0 36.0 22 35.005612352129035 36.0 36.0 36.0 36.0 36.0 23 34.954200884274464 36.0 36.0 36.0 36.0 36.0 24 34.928744029134684 36.0 36.0 36.0 36.0 36.0 25 34.90351940925542 36.0 36.0 36.0 32.0 36.0 26 34.84358839086897 36.0 36.0 36.0 32.0 36.0 27 34.83191353726428 36.0 36.0 36.0 32.0 36.0 28 34.81233455656806 36.0 36.0 36.0 32.0 36.0 29 34.792387095925164 36.0 36.0 36.0 32.0 36.0 30 34.77079502257907 36.0 36.0 36.0 32.0 36.0 31 34.764864121084365 36.0 36.0 36.0 32.0 36.0 32 34.72701480538492 36.0 36.0 36.0 32.0 36.0 33 34.70649024011965 36.0 36.0 36.0 32.0 36.0 34 34.69736649085167 36.0 36.0 36.0 32.0 36.0 35 34.66252539589338 36.0 36.0 36.0 32.0 36.0 36 34.63462310346042 36.0 36.0 36.0 32.0 36.0 37 34.630932498112124 36.0 36.0 36.0 32.0 36.0 38 34.59168435202685 36.0 36.0 36.0 32.0 36.0 39 34.59360145410238 36.0 36.0 36.0 32.0 36.0 40 34.571870039599986 36.0 36.0 36.0 32.0 36.0 41 34.558462323893096 36.0 36.0 36.0 32.0 36.0 42 34.5017017038714 36.0 36.0 36.0 32.0 36.0 43 34.49348522035449 36.0 36.0 36.0 32.0 36.0 44 34.44238301245517 36.0 36.0 36.0 32.0 36.0 45 34.414315058869704 36.0 36.0 36.0 32.0 36.0 46 34.40242732294287 36.0 36.0 36.0 32.0 36.0 47 34.36783239736072 36.0 36.0 36.0 32.0 36.0 48 34.33917224386096 36.0 36.0 36.0 32.0 36.0 49 34.32680029741596 36.0 36.0 36.0 32.0 36.0 50 33.72518672682592 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 4.0 19 4.0 20 20.0 21 84.0 22 240.0 23 710.0 24 2004.0 25 4517.0 26 9223.0 27 16570.0 28 27419.0 29 42194.0 30 61764.0 31 88143.0 32 129342.0 33 211145.0 34 446932.0 35 1543272.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.76680229144062 17.68863953164744 11.86024519297208 26.68431298393986 2 16.156791981346785 20.24755610053662 36.8300758328766 26.765576085239996 3 18.189622706141044 24.462306804155315 28.330771645424203 29.017298844279438 4 12.576855356525638 16.176230953321873 35.68306389527428 35.5638497948782 5 14.612049062021134 36.77627267825701 33.168652729712605 15.443025530009248 6 34.4824356261965 35.20550150914505 16.901766617045634 13.410296247612811 7 30.531296628521996 30.12999378770197 20.83720876224316 18.501500821532872 8 28.312845667670565 32.80640442919089 19.113619940029114 19.76712996310943 9 27.733035241859348 14.106575185200812 17.956398703023403 40.20399086991643 10 15.814581789116977 26.80478331298032 31.603656188251506 25.7769787096512 11 37.27066284200997 20.801815460443173 22.608721904855535 19.318799792691323 12 25.381021683090903 23.03706484800161 28.676913430201505 22.905000038705982 13 29.837415209544915 19.44023301046031 24.913424228056087 25.808927551938687 14 23.941866779584785 19.09294185632898 24.976128113553926 31.9890632505323 15 25.38766763835983 26.834562755495238 21.96005903703672 25.81771056910821 16 26.043162905772306 25.39746497179668 23.35838015823896 25.20099196419206 17 24.50410998352291 25.533957246262656 24.821420761135585 25.140512009078854 18 25.196481315260726 24.714940011511164 25.541313039005193 24.547265634222914 19 26.053990869276607 24.62369149844112 24.780411714729727 24.541905917552548 20 26.28785374610712 24.099479710570133 24.520758549630315 25.09190799369243 21 26.871671052687603 23.963388885297842 24.10044639487658 25.064493667137977 22 26.20933796204728 24.04443751178112 24.407963669059598 25.338260857112004 23 24.941969720134775 23.883006620696595 24.961245410895412 26.21377824827322 24 25.35270907665118 24.525057149514588 24.729192970667764 25.393040803166468 25 25.376865166147354 24.03975150471251 24.911071974608582 25.67231135453156 26 25.287406152698015 24.59960548908979 25.030966319482616 25.082022038729573 27 25.642653371680286 24.56733877054923 24.29792949683173 25.492078360938752 28 25.2260025105584 24.23133986635902 24.985939556932504 25.55671806615008 29 25.301777493239857 24.483361111906753 24.735342318985758 25.47951907586763 30 25.20701575653794 24.492209983437192 24.946787283447758 25.353986976577115 31 25.698561246597045 24.236660206230738 24.331573261304698 25.733205285867516 32 25.39158889465623 24.549750668953475 24.21021299292862 25.848447443461676 33 25.007925377969887 24.28753851888524 24.769680194064346 25.93485590908053 34 25.58561710910024 24.173122344217994 24.978536984897314 25.262723561784455 35 26.017459132292043 24.115402286571147 24.792540716751066 25.074597864385744 36 25.31537773717683 24.538768526869525 24.545968313198447 25.599885422755197 37 25.87822721114767 24.354402941745693 24.40959938068512 25.35777046642152 38 25.362778296474875 24.39509854470627 24.72845819998173 25.51366495883713 39 25.774582957065395 24.277226864311686 24.31663097201573 25.631559206607196 40 26.091724184913033 24.378640370841733 24.63321473581862 24.896420708426618 41 25.28374364329857 24.541841397735006 24.883162105272937 25.291252853693486 42 26.01429431265954 24.787104540466682 24.443352060831145 24.755249086042628 43 25.410597502972653 24.1298026902497 24.848309614050734 25.61129019272691 44 25.29425494056842 24.46098579517634 24.43493645780878 25.80982280644646 45 25.34913119746582 24.64154057430921 24.50947453819464 25.49985369003033 46 25.361544996932533 24.386264715615823 24.58444049211071 25.66774979534093 47 25.5005649245161 24.410738636385627 24.782323107406103 25.306373331692168 48 25.88509336604296 24.839667727355593 24.14631701219373 25.128921894407714 49 25.393292088175457 24.718839314190873 24.333636788699074 25.554231808934592 50 25.40097989352618 25.022585237499158 24.220818982901797 25.35561588607286 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 35.5 2 47.0 3 148.0 4 249.0 5 265.5 6 282.0 7 280.5 8 279.0 9 368.0 10 457.0 11 686.5 12 916.0 13 1610.5 14 2305.0 15 3109.0 16 3913.0 17 4026.5 18 4140.0 19 4275.0 20 4410.0 21 4867.0 22 5324.0 23 6299.0 24 7274.0 25 9012.0 26 10750.0 27 13747.5 28 16745.0 29 20655.0 30 24565.0 31 29139.0 32 33713.0 33 40468.0 34 47223.0 35 55364.0 36 63505.0 37 75475.0 38 87445.0 39 96426.5 40 105408.0 41 117446.0 42 129484.0 43 135312.5 44 141141.0 45 154259.5 46 167378.0 47 179034.0 48 190690.0 49 199134.0 50 207578.0 51 205884.0 52 204190.0 53 202824.0 54 201458.0 55 200207.0 56 198956.0 57 193381.5 58 187807.0 59 171319.0 60 154831.0 61 136378.0 62 117925.0 63 101583.0 64 85241.0 65 72035.5 66 58830.0 67 49673.5 68 40517.0 69 35398.0 70 30279.0 71 23827.5 72 17376.0 73 14700.5 74 12025.0 75 9412.5 76 6800.0 77 5803.0 78 4806.0 79 4029.0 80 3252.0 81 2548.5 82 1845.0 83 1502.5 84 1160.0 85 838.5 86 517.0 87 371.5 88 226.0 89 161.5 90 97.0 91 90.0 92 83.0 93 68.0 94 53.0 95 43.5 96 34.0 97 25.5 98 17.0 99 17.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009057175159961713 2 4.257646442717044E-4 3 1.5482350700789252E-4 4 0.0 5 0.0 6 1.9352938375986567E-4 7 7.741175350394626E-5 8 0.0 9 0.0015482350700789253 10 8.515292885434089E-4 11 0.0 12 2.709411372638119E-4 13 4.644705210236775E-4 14 1.5482350700789252E-4 15 0.004799528717244668 16 0.0010063527955513013 17 0.0 18 3.0964701401578503E-4 19 7.741175350394626E-5 20 9.676469187993282E-4 21 0.0 22 1.5482350700789252E-4 23 8.515292885434089E-4 24 5.031763977756507E-4 25 0.0014321174398230058 26 0.005225293361516372 27 0.006076822650059781 28 0.0037931759216933664 29 0.002361058481870361 30 0.0034061171541736354 31 0.006579999047835432 32 0.0028642348796460116 33 0.004412469949724937 34 0.0028255290028940385 35 0.002631999619134173 36 0.006850940185099244 37 0.0033674112774216623 38 0.007392822459626868 39 0.003870587675197313 40 0.0022836467283664143 41 0.003599646537933501 42 0.0016256468235828713 43 0.0013547056863190594 44 0.0010837645490552475 45 0.001199882179311167 46 8.515292885434089E-4 47 0.002167529098110495 48 0.001780470330590764 49 4.257646442717044E-4 50 0.0015869409468308984 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2583587.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.7067068494585 #Duplication Level Percentage of deduplicated Percentage of total 1 75.45713296260887 39.77096986760837 2 13.632864374416492 14.370867722015932 3 4.519786084387135 7.1466912051616385 4 2.0501202321148657 4.322203443208881 5 1.1289542015794198 2.975172907455548 6 0.6849831671786892 2.1661924193580475 7 0.4591948013248194 1.6941852046155816 8 0.3383348225100975 1.4266011445602627 9 0.24108366917324356 1.1436053649575386 >10 1.344249454223167 12.642042927291833 >50 0.08091965306425279 2.9307935491916854 >100 0.05437718573205473 5.815530347746555 >500 0.005925475323665244 2.1384022552992805 >1k 0.0020739163632791696 1.456741641528857 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.870587675197313E-5 0.0 5 0.0 0.0 0.0 3.870587675197313E-5 0.0 6 0.0 0.0 0.0 3.870587675197313E-5 0.0 7 0.0 0.0 0.0 3.870587675197313E-5 0.0 8 0.0 0.0 0.0 3.870587675197313E-5 0.0 9 0.0 0.0 0.0 3.870587675197313E-5 0.0 10 0.0 0.0 0.0 1.5482350700789252E-4 0.0 11 0.0 0.0 0.0 1.5482350700789252E-4 0.0 12 0.0 0.0 0.0 1.5482350700789252E-4 0.0 13 0.0 0.0 0.0 1.5482350700789252E-4 3.870587675197313E-5 14 0.0 0.0 0.0 1.5482350700789252E-4 7.741175350394626E-5 15 0.0 0.0 0.0 2.3223526051183876E-4 7.741175350394626E-5 16 0.0 0.0 0.0 2.709411372638119E-4 1.1611763025591938E-4 17 0.0 0.0 0.0 3.0964701401578503E-4 1.1611763025591938E-4 18 0.0 0.0 0.0 4.257646442717044E-4 1.1611763025591938E-4 19 0.0 0.0 0.0 4.257646442717044E-4 1.1611763025591938E-4 20 0.0 0.0 0.0 5.418822745276238E-4 1.1611763025591938E-4 21 0.0 0.0 0.0 6.579999047835432E-4 1.5482350700789252E-4 22 0.0 0.0 0.0 8.902351652953819E-4 1.5482350700789252E-4 23 0.0 0.0 0.0 0.001470823316574979 1.5482350700789252E-4 24 0.0 0.0 0.0 0.002090117344606549 1.5482350700789252E-4 25 0.0 0.0 0.0 0.0024771761121262803 1.5482350700789252E-4 26 0.0 0.0 0.0 0.003057764263405877 1.5482350700789252E-4 27 0.0 0.0 0.0 0.0035222347844295547 1.5482350700789252E-4 28 0.0 0.0 0.0 0.004373764072972963 1.5482350700789252E-4 29 0.0 0.0 0.0 0.006541293171083459 1.5482350700789252E-4 30 0.0 0.0 0.0 0.010489292599784717 1.5482350700789252E-4 31 0.0 0.0 0.0 0.020320585294785892 1.5482350700789252E-4 32 0.0 0.0 0.0 0.03142917192260218 1.5482350700789252E-4 33 0.0 0.0 0.0 0.04358281722272174 1.5482350700789252E-4 34 0.0 0.0 0.0 0.056355756550872875 1.5482350700789252E-4 35 0.0 3.870587675197313E-5 0.0 0.07125751910038253 1.5482350700789252E-4 36 0.0 3.870587675197313E-5 0.0 0.09301022183499143 1.5482350700789252E-4 37 0.0 3.870587675197313E-5 0.0 0.12765198152800739 1.5482350700789252E-4 38 0.0 3.870587675197313E-5 0.0 0.17483444528866263 2.709411372638119E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3440 0.0 24.55799 1 AACGCAG 4650 0.0 18.403833 6 TCAACGC 4845 0.0 17.66312 4 CAACGCA 4975 0.0 17.20157 5 TATCAAC 4990 0.0 17.061357 2 ATCAACG 5025 0.0 17.03041 3 ATACCGT 520 0.0 16.49958 6 TAATACC 350 0.0 16.34244 4 TAGGACG 500 0.0 16.279585 4 GGTATCA 1660 0.0 15.638457 1 CGACGGT 510 0.0 15.529015 7 TACGGGT 115 8.2250925E-5 15.303958 4 ACCGTCG 475 0.0 15.283822 8 ACGCAGA 5605 0.0 15.268121 7 GTACATG 8010 0.0 15.160954 1 TTAACGG 160 3.8277358E-7 15.125199 35 AGAGTAC 5775 0.0 14.8192425 11 ACGGTAT 535 0.0 14.803648 9 TACGACG 550 0.0 14.7996235 5 ACATGGG 7955 0.0 14.795349 3 >>END_MODULE