##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063880_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3151621 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.215564942612072 32.0 32.0 32.0 32.0 32.0 2 31.00073105236956 32.0 32.0 32.0 32.0 32.0 3 31.27166274117351 32.0 32.0 32.0 32.0 32.0 4 31.434935228569678 32.0 32.0 32.0 32.0 32.0 5 31.301463913332217 32.0 32.0 32.0 32.0 32.0 6 34.94377559992144 36.0 36.0 36.0 36.0 36.0 7 34.9790450691882 36.0 36.0 36.0 36.0 36.0 8 34.88570262731464 36.0 36.0 36.0 32.0 36.0 9 35.083966314477536 36.0 36.0 36.0 36.0 36.0 10 34.846124581604194 36.0 36.0 36.0 32.0 36.0 11 35.09200757324564 36.0 36.0 36.0 36.0 36.0 12 34.96828171915342 36.0 36.0 36.0 36.0 36.0 13 35.03121726882769 36.0 36.0 36.0 36.0 36.0 14 34.96248787528703 36.0 36.0 36.0 32.0 36.0 15 34.899469511086515 36.0 36.0 36.0 32.0 36.0 16 34.936367666035984 36.0 36.0 36.0 32.0 36.0 17 34.90072918031705 36.0 36.0 36.0 32.0 36.0 18 34.90750505850799 36.0 36.0 36.0 32.0 36.0 19 34.908765679629624 36.0 36.0 36.0 32.0 36.0 20 34.89528214211036 36.0 36.0 36.0 32.0 36.0 21 34.89977189516125 36.0 36.0 36.0 32.0 36.0 22 34.87268837211073 36.0 36.0 36.0 32.0 36.0 23 34.82258748751833 36.0 36.0 36.0 32.0 36.0 24 34.8032825012906 36.0 36.0 36.0 32.0 36.0 25 34.76495492319667 36.0 36.0 36.0 32.0 36.0 26 34.70472052318473 36.0 36.0 36.0 32.0 36.0 27 34.68634140970631 36.0 36.0 36.0 32.0 36.0 28 34.655867250535515 36.0 36.0 36.0 32.0 36.0 29 34.62993837139681 36.0 36.0 36.0 32.0 36.0 30 34.60181379677315 36.0 36.0 36.0 32.0 36.0 31 34.60065248962359 36.0 36.0 36.0 32.0 36.0 32 34.55436488080261 36.0 36.0 36.0 32.0 36.0 33 34.54631664149972 36.0 36.0 36.0 32.0 36.0 34 34.548231846405386 36.0 36.0 36.0 32.0 36.0 35 34.50536025746751 36.0 36.0 36.0 32.0 36.0 36 34.46509526367542 36.0 36.0 36.0 32.0 36.0 37 34.443069138072126 36.0 36.0 36.0 32.0 36.0 38 34.39809006222512 36.0 36.0 36.0 32.0 36.0 39 34.36485795722265 36.0 36.0 36.0 32.0 36.0 40 34.381717535198554 36.0 36.0 36.0 32.0 36.0 41 34.36528345254712 36.0 36.0 36.0 32.0 36.0 42 34.30596191610603 36.0 36.0 36.0 32.0 36.0 43 34.30752714238165 36.0 36.0 36.0 32.0 36.0 44 34.232574919382756 36.0 36.0 36.0 32.0 36.0 45 34.20398233163188 36.0 36.0 36.0 32.0 36.0 46 34.17241508417414 36.0 36.0 36.0 32.0 36.0 47 34.158787811097845 36.0 36.0 36.0 32.0 36.0 48 34.110468549359204 36.0 36.0 36.0 32.0 36.0 49 34.09414456877905 36.0 36.0 36.0 32.0 36.0 50 33.422126899141745 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 2.0 18 3.0 19 7.0 20 26.0 21 63.0 22 211.0 23 691.0 24 1829.0 25 4302.0 26 9140.0 27 17700.0 28 31477.0 29 52287.0 30 81817.0 31 126838.0 32 198145.0 33 345079.0 34 716537.0 35 1565467.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.58716569530838 19.115836022325112 12.906589359937984 26.39040892242852 2 15.202190629853678 20.322470614179124 38.85797871243382 25.617360043533377 3 18.197890734219694 24.339942213808907 29.19801828774934 28.264148764222057 4 12.201784415067674 16.682431041042054 36.68493134168099 34.43085320220928 5 14.029066312224725 37.040113643106196 33.7174108181155 15.213409226553573 6 33.74765001435772 36.08292891105037 17.003092065496578 13.166329009095337 7 30.074383991212134 30.65040539481454 20.883044555829876 18.39216605814345 8 27.088568073381918 35.005985808572795 19.105216014235214 18.80023010381007 9 27.08536405820057 14.718408267080935 18.833354909785047 39.36287276493344 10 15.67277127915101 27.108591619637735 32.26075848313526 24.95787861807599 11 36.37160051922487 20.76924858667968 24.03870896913049 18.82044192496496 12 25.29281019413856 23.231993755582454 29.61954426540044 21.855651784878546 13 29.377623458210127 20.142289043737286 25.556437290999877 24.923650207052706 14 22.745988961215122 20.742127448942842 25.425186769323027 31.086696820519006 15 24.08335015084995 29.583344439240534 22.07432326947754 24.258982140431975 16 24.55919966924705 26.148171863344206 25.429805904752417 23.86282256265633 17 23.134031661801973 27.149203536846596 25.97323726425227 23.743527537099162 18 23.80795091780045 25.431850567852443 27.955321897277297 22.804876617069812 19 25.41289876317576 25.0200214492864 25.765574529924294 23.801505257613545 20 25.57334260691216 25.349710591996587 25.68268368571452 23.39426311537673 21 25.553072529977435 24.742727631272924 24.972165117569656 24.73203472117999 22 25.33173415576751 25.82874838971703 25.270495808504833 23.569021646010626 23 23.397617022194737 25.80693063180864 26.20165039822592 24.593801947770704 24 24.811969239868358 25.304098347131564 26.045560176823795 23.83837223617628 25 24.284006290210193 25.47103596817326 26.327816918837758 23.917140822778784 26 23.508304981592786 26.332722192289214 26.574418003974003 23.584554822143993 27 24.175698993925987 26.069171792865397 25.552395113626776 24.202734099581843 28 23.529841063641495 26.058309135961043 25.699751198868608 24.712098601528854 29 24.146726950402993 25.479884285179853 25.47928140550924 24.894107358907913 30 23.6057503753749 25.610150797267096 26.249811201973905 24.534287625384103 31 24.920694103106392 24.96695918169832 25.507479997017203 24.60486671817808 32 24.021307766044842 25.940472666107574 25.422184230057365 24.616035337790223 33 23.423316223955158 25.900876030624264 26.38740810690061 24.288399638519962 34 24.335508035270344 25.68827396611755 26.370035249400054 23.606182749212053 35 24.49444541222558 25.861364876017717 26.044291376371987 23.59989833538471 36 23.602707385335947 25.750052358014585 26.237743464767817 24.40949679188165 37 24.369184744997412 25.687248394979306 25.151093901762227 24.79247295826105 38 24.13216678745908 26.10943919741373 25.495111397684596 24.263282617442595 39 25.036244656907712 25.12759800970903 25.239005311440682 24.597152021942573 40 25.39705002768475 25.224690668574716 25.949761308306535 23.428497995434 41 24.6494633550424 24.95471240113913 26.591919784866057 23.803904458952413 42 24.8670108545796 26.196791253129785 25.79473805620241 23.141459836088202 43 23.760629195714277 25.807285808161563 26.195852935940998 24.236232060183166 44 23.61726674586494 25.866897407779703 25.702186583000803 24.813649263354552 45 23.754370823523438 26.222656572258995 25.73794731531486 24.28502528890271 46 24.122546358331395 25.167288521892594 25.801222303274756 24.908942816501252 47 24.899565516346364 25.191738559702394 25.790744067138878 24.117951856812365 48 24.3619700111944 25.89164913046679 25.218652509093864 24.52772834924495 49 24.471230074054283 25.532022235005826 25.43676924185027 24.559978449089623 50 23.918772145645086 26.536348922238663 25.15364520451494 24.391233727601307 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 15.0 1 23.5 2 32.0 3 86.0 4 140.0 5 186.5 6 233.0 7 232.0 8 231.0 9 301.0 10 371.0 11 614.0 12 857.0 13 1538.0 14 2219.0 15 2866.0 16 3513.0 17 3836.0 18 4159.0 19 4405.0 20 4651.0 21 5770.5 22 6890.0 23 8490.0 24 10090.0 25 14586.0 26 19082.0 27 26897.0 28 34712.0 29 43627.5 30 52543.0 31 63614.5 32 74686.0 33 91974.0 34 109262.0 35 129190.5 36 149119.0 37 159815.5 38 170512.0 39 170838.5 40 171165.0 41 173602.5 42 176040.0 43 174045.0 44 172050.0 45 183578.5 46 195107.0 47 204108.0 48 213109.0 49 217804.5 50 222500.0 51 218187.0 52 213874.0 53 211301.0 54 208728.0 55 206546.0 56 204364.0 57 196691.5 58 189019.0 59 172636.0 60 156253.0 61 137734.5 62 119216.0 63 103397.0 64 87578.0 65 74098.5 66 60619.0 67 50794.5 68 40970.0 69 35985.0 70 31000.0 71 24054.0 72 17108.0 73 14353.5 74 11599.0 75 8953.0 76 6307.0 77 5399.5 78 4492.0 79 3734.0 80 2976.0 81 2397.5 82 1819.0 83 1508.0 84 1197.0 85 888.5 86 580.0 87 408.0 88 236.0 89 188.5 90 141.0 91 120.0 92 99.0 93 77.0 94 55.0 95 54.0 96 53.0 97 40.0 98 27.0 99 25.0 100 23.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.006092103079653296 2 5.076752566377747E-4 3 9.518911061958275E-5 4 0.0 5 0.0 6 1.903782212391655E-4 7 6.345940707972184E-5 8 0.0 9 0.001173999030974854 10 4.7594555309791374E-4 11 0.0 12 1.903782212391655E-4 13 2.5383762831888735E-4 14 1.903782212391655E-4 15 0.004600807013279833 16 7.61512884956662E-4 17 0.0 18 3.1729703539860914E-4 19 3.172970353986092E-5 20 4.7594555309791374E-4 21 0.0 22 3.172970353986092E-5 23 5.711346637174965E-4 24 2.8556733185874824E-4 25 0.0018085931017720724 26 0.0044104287920406675 27 0.005171941676997329 28 0.0034268079823049787 29 0.002538376283188873 30 0.0033316188716853963 31 0.006853615964609957 32 0.0029825921327469264 33 0.004220050570801502 34 0.002474916876109151 35 0.002601835690268595 36 0.007646858553106481 37 0.0032998891681455355 38 0.0066315080398309315 39 0.003871023831863032 40 0.0020941604336308203 41 0.003046051539826648 42 0.001523025769913324 43 0.0013326475486741584 44 0.001173999030974854 45 0.0013009178451342976 46 9.518911061958275E-4 47 0.0020307010265510988 48 0.0014278366592937412 49 4.442158495580528E-4 50 0.0013326475486741584 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3151621.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.40467369725958 #Duplication Level Percentage of deduplicated Percentage of total 1 85.07342884561085 51.38832709726153 2 8.681596814955677 10.488180455571312 3 2.3908904483072386 4.332628721276802 4 1.0809427211252818 2.61175969420002 5 0.6127526774266325 1.8506562768538946 6 0.41389576835943775 1.5000743299457024 7 0.27800321291338514 1.1754885353975966 8 0.2200632011560735 1.0634276686885613 9 0.1732358730859508 0.9417830747775058 >10 0.9467294042375918 10.356336199122417 >50 0.06804035659831772 2.8369229731454766 >100 0.05143513448179771 6.5194021622064335 >500 0.006395591475499421 2.6538197499827216 >1k 0.0025899502662490004 2.2811930615700984 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.172970353986092E-5 6.345940707972184E-5 2 0.0 0.0 0.0 3.172970353986092E-5 6.345940707972184E-5 3 0.0 0.0 0.0 3.172970353986092E-5 6.345940707972184E-5 4 0.0 0.0 0.0 3.172970353986092E-5 6.345940707972184E-5 5 0.0 0.0 0.0 3.172970353986092E-5 9.518911061958275E-5 6 0.0 0.0 0.0 3.172970353986092E-5 9.518911061958275E-5 7 3.172970353986092E-5 3.172970353986092E-5 0.0 6.345940707972184E-5 9.518911061958275E-5 8 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 9.518911061958275E-5 9 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 9.518911061958275E-5 10 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 9.518911061958275E-5 11 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 9.518911061958275E-5 12 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 3.1729703539860914E-4 13 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 3.490267389384701E-4 14 3.172970353986092E-5 3.172970353986092E-5 0.0 9.518911061958275E-5 3.490267389384701E-4 15 3.172970353986092E-5 3.172970353986092E-5 0.0 1.2691881415944367E-4 4.7594555309791374E-4 16 6.345940707972184E-5 3.172970353986092E-5 0.0 1.2691881415944367E-4 5.394049601776356E-4 17 6.345940707972184E-5 3.172970353986092E-5 0.0 1.2691881415944367E-4 5.394049601776356E-4 18 6.345940707972184E-5 3.172970353986092E-5 0.0 1.2691881415944367E-4 5.394049601776356E-4 19 6.345940707972184E-5 3.172970353986092E-5 0.0 1.2691881415944367E-4 5.394049601776356E-4 20 6.345940707972184E-5 3.172970353986092E-5 0.0 1.2691881415944367E-4 6.345940707972183E-4 21 6.345940707972184E-5 3.172970353986092E-5 0.0 1.5864851769930457E-4 6.663237743370793E-4 22 6.345940707972184E-5 3.172970353986092E-5 0.0 2.2210792477902642E-4 6.663237743370793E-4 23 6.345940707972184E-5 3.172970353986092E-5 0.0 2.5383762831888735E-4 6.663237743370793E-4 24 6.345940707972184E-5 3.172970353986092E-5 0.0 3.1729703539860914E-4 6.980534778769402E-4 25 6.345940707972184E-5 3.172970353986092E-5 0.0 3.80756442478331E-4 6.980534778769402E-4 26 6.345940707972184E-5 3.172970353986092E-5 0.0 4.124861460181919E-4 7.61512884956662E-4 27 6.345940707972184E-5 3.172970353986092E-5 0.0 5.076752566377747E-4 7.932425884965229E-4 28 6.345940707972184E-5 3.172970353986092E-5 0.0 9.836208097356884E-4 7.932425884965229E-4 29 6.345940707972184E-5 3.172970353986092E-5 0.0 0.0025066465796490123 7.932425884965229E-4 30 6.345940707972184E-5 3.172970353986092E-5 0.0 0.005711346637174965 7.932425884965229E-4 31 6.345940707972184E-5 3.172970353986092E-5 0.0 0.015737932955771014 8.249722920363838E-4 32 6.345940707972184E-5 3.172970353986092E-5 0.0 0.02697024800888178 9.201614026559666E-4 33 6.345940707972184E-5 3.172970353986092E-5 0.0 0.039027535354028926 9.518911061958275E-4 34 6.345940707972184E-5 3.172970353986092E-5 0.0 0.05394049601776356 0.0010788099203552712 35 6.345940707972184E-5 3.172970353986092E-5 0.0 0.07034475274787165 0.0010788099203552712 36 6.345940707972184E-5 3.172970353986092E-5 0.0 0.09366608484966943 0.0010788099203552712 37 6.345940707972184E-5 3.172970353986092E-5 0.0 0.13158308057980322 0.0010788099203552712 38 6.345940707972184E-5 3.172970353986092E-5 0.0 0.18476206371261011 0.001110539623895132 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 3415 0.0 29.309776 1 GGTATCA 1250 0.0 24.286274 1 AATTGCG 75 5.4785392E-5 20.5322 43 ATTACGC 65 4.9364177E-4 20.306572 3 TCAACGC 5185 0.0 19.00763 4 TAGGACC 2455 0.0 18.817698 4 CAACGCA 5265 0.0 18.80238 5 TATCAAC 5335 0.0 18.555384 2 CGTCGTA 635 0.0 18.362066 10 TGTAGGA 4040 0.0 18.350182 2 AACGCAG 5415 0.0 18.322166 6 ACCGTCG 625 0.0 18.30299 8 ATACCGT 690 0.0 18.17291 6 ATCAACG 5425 0.0 18.166739 3 CCGTCGT 645 0.0 18.077383 9 GTAGGAC 4175 0.0 17.440954 3 TAGGACG 4130 0.0 17.417925 4 CTGTAGG 4070 0.0 17.242018 1 GTCCTAC 3655 0.0 17.21355 1 CGCAATA 670 0.0 17.075853 36 >>END_MODULE