##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063879_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2746974 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.28552217822229 32.0 32.0 32.0 32.0 32.0 2 30.8382048756195 32.0 32.0 32.0 32.0 32.0 3 30.85639325308503 32.0 32.0 32.0 32.0 32.0 4 30.888546451477154 32.0 32.0 32.0 32.0 32.0 5 30.778722332282722 32.0 32.0 32.0 32.0 32.0 6 34.46977656140903 36.0 36.0 36.0 32.0 36.0 7 34.412486612541656 36.0 36.0 36.0 32.0 36.0 8 34.36443300883081 36.0 36.0 36.0 32.0 36.0 9 34.533531442234256 36.0 36.0 36.0 32.0 36.0 10 34.18460313057204 36.0 36.0 36.0 32.0 36.0 11 34.504541724821564 36.0 36.0 36.0 32.0 36.0 12 34.303132465032434 36.0 36.0 36.0 32.0 36.0 13 34.38835933649172 36.0 36.0 36.0 32.0 36.0 14 34.28402635044962 36.0 36.0 36.0 32.0 36.0 15 34.21324446463636 36.0 36.0 36.0 32.0 36.0 16 34.210519284128644 36.0 36.0 36.0 32.0 36.0 17 34.143019191299224 36.0 36.0 36.0 32.0 36.0 18 34.138191333445455 36.0 36.0 36.0 32.0 36.0 19 34.15468948741415 36.0 36.0 36.0 32.0 36.0 20 34.13828525497511 36.0 36.0 36.0 32.0 36.0 21 34.1290540063357 36.0 36.0 36.0 32.0 36.0 22 34.10811423770301 36.0 36.0 36.0 32.0 36.0 23 34.04890035362548 36.0 36.0 36.0 32.0 36.0 24 34.03235815118745 36.0 36.0 36.0 32.0 36.0 25 33.61899748596092 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 6.0 4 26.0 5 34.0 6 112.0 7 45.0 8 153.0 9 183.0 10 248.0 11 85.0 12 150.0 13 143.0 14 241.0 15 377.0 16 733.0 17 938.0 18 1250.0 19 1658.0 20 2575.0 21 3904.0 22 6147.0 23 9673.0 24 14403.0 25 21175.0 26 30395.0 27 40429.0 28 54655.0 29 73746.0 30 96648.0 31 132326.0 32 187715.0 33 267674.0 34 572613.0 35 1226514.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.791003248503216 16.545151281192187 11.014465308025114 26.649380162279492 2 16.874105334282792 19.24101038431126 37.512505297003536 26.372378984402417 3 19.2647989276725 23.057880784383393 28.27943421764433 29.397886070299776 4 13.06189137346229 15.246639709836064 35.22642754766259 36.46504136903906 5 14.872595452835979 36.16360295523065 33.6398683085262 15.323933283407174 6 34.75670007755014 34.57068895838871 16.890057197781992 13.78255376627916 7 30.737350797910977 30.01166271416082 20.443940504500684 18.80704598342751 8 28.096333031558203 33.308108525426675 19.092496869963078 19.503061573052037 9 27.600485276533686 14.32844159727511 18.03299108298906 40.03808204320214 10 15.893520388631712 26.654323717221402 31.854316286683275 25.597839607463612 11 37.0635748544521 20.707794024231756 22.7691397667737 19.459491354542436 12 25.03934053605123 23.056067549157458 28.917588862257126 22.987003052534185 13 29.88466933820286 19.495293120411826 24.788169473163883 25.831868068221432 14 23.551592180348145 19.338211053372603 24.953854728455976 32.15634203782328 15 25.25167091566798 27.15343138272665 21.864854439377698 25.73004326222767 16 25.743018965798615 25.455639614855567 23.648745133238524 25.152596286107293 17 24.273718658092452 25.70883325088898 25.05735285868212 24.96009523233645 18 24.845284844563505 24.904558773543354 25.83993561838519 24.410220763507954 19 25.893513861864783 24.605233486473658 24.938933914564675 24.562318737096884 20 25.987681487839602 24.46389770956991 24.686754502676322 24.861666299914166 21 26.32338229797441 24.15622151612365 24.28707885757752 25.23331732832442 22 26.039134679840288 24.439319751683133 24.43793535600828 25.083610212468304 23 24.85401987741568 24.398199745475228 24.979715621576386 25.76806475553271 24 25.216903756483433 24.52255671557346 24.954342282962358 25.306197244980748 25 25.146500936476613 24.3392111008819 25.09972264553823 25.41456531710326 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 87.0 1 87.0 2 281.0 3 475.0 4 475.0 5 475.0 6 1335.0 7 2195.0 8 2195.0 9 2195.0 10 2651.5 11 3108.0 12 3108.0 13 3108.0 14 4425.5 15 5743.0 16 5743.0 17 5743.0 18 9894.5 19 14046.0 20 14046.0 21 14046.0 22 23340.5 23 32635.0 24 32635.0 25 32635.0 26 50250.5 27 67866.0 28 67866.0 29 67866.0 30 89401.0 31 110936.0 32 110936.0 33 110936.0 34 137510.5 35 164085.0 36 164085.0 37 164085.0 38 192201.5 39 220318.0 40 220318.0 41 220318.0 42 253884.0 43 287450.0 44 287450.0 45 287450.0 46 321402.0 47 355354.0 48 355354.0 49 355354.0 50 367115.5 51 378877.0 52 378877.0 53 378877.0 54 361289.0 55 343701.0 56 343701.0 57 343701.0 58 315359.0 59 287017.0 60 287017.0 61 287017.0 62 249191.5 63 211366.0 64 211366.0 65 211366.0 66 171469.0 67 131572.0 68 131572.0 69 131572.0 70 99407.5 71 67243.0 72 67243.0 73 67243.0 74 50141.5 75 33040.0 76 33040.0 77 33040.0 78 25098.5 79 17157.0 80 17157.0 81 17157.0 82 11802.0 83 6447.0 84 6447.0 85 6447.0 86 4759.5 87 3072.0 88 3072.0 89 3072.0 90 2216.5 91 1361.0 92 1361.0 93 1361.0 94 952.5 95 544.0 96 544.0 97 544.0 98 911.5 99 1279.0 100 1279.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.03982564086882511 2 0.005023709725683607 3 0.0018929920705474462 4 0.004113617384074258 5 0.009137327109757863 6 0.013250944493832122 7 0.02238827160358999 8 0.03640369366437396 9 0.048162086717966755 10 0.05631651409878652 11 0.05409588878525971 12 0.06239593094073697 13 0.06323321589501757 14 0.06694639264878371 15 0.059083194817278945 16 0.06632752985648936 17 0.06144943490546324 18 0.07612012345220595 19 0.0726981762477548 20 0.0787047857023765 21 0.07280738732874792 22 0.07622933453319908 23 0.08194471443850579 24 0.07619293083953471 25 0.07684819732549343 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 2746974.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.33330082198775 #Duplication Level Percentage of deduplicated Percentage of total 1 80.11001091099273 44.327513325906814 2 11.125213103100993 12.311895266852142 3 3.3730777583173372 5.5993057889078806 4 1.5344152717531145 3.396170472710687 5 0.8655294697428296 2.394630125978777 6 0.5602218965263018 1.859935603653261 7 0.4076738809887902 1.5790559045813977 8 0.29267655862205916 1.2955808049422826 9 0.22481949978419036 1.1196004510986675 >10 1.3551324452299915 13.793832174362915 >50 0.08858363494729322 3.3768475014958694 >100 0.05636838982747355 6.053374841243481 >500 0.004757441810824089 1.748641201030831 >1k 0.0015197383562107745 1.1436165372351248 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 3886 0.1414647535797572 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.280738732874793E-5 2 0.0 0.0 0.0 0.0 7.280738732874793E-5 3 0.0 0.0 0.0 0.0 7.280738732874793E-5 4 0.0 0.0 0.0 0.0 7.280738732874793E-5 5 0.0 0.0 0.0 3.6403693664373964E-5 7.280738732874793E-5 6 0.0 0.0 0.0 3.6403693664373964E-5 1.4561477465749586E-4 7 0.0 0.0 0.0 3.6403693664373964E-5 1.820184683218698E-4 8 0.0 0.0 0.0 3.6403693664373964E-5 1.820184683218698E-4 9 0.0 0.0 0.0 3.6403693664373964E-5 2.1842216198624377E-4 10 0.0 0.0 0.0 3.6403693664373964E-5 2.1842216198624377E-4 11 0.0 0.0 0.0 3.6403693664373964E-5 2.1842216198624377E-4 12 0.0 0.0 0.0 3.6403693664373964E-5 4.732480176368615E-4 13 0.0 0.0 0.0 3.6403693664373964E-5 5.824590986299834E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 895 0.0 14.221541 1 AGTATCG 70 7.2611365E-6 13.57256 8 GTATCAA 2695 0.0 13.1466465 1 CGTCGTA 235 0.0 12.532961 10 CGCATCG 240 0.0 11.876207 13 CCGTCGT 235 0.0 11.724382 9 TAGTATC 90 7.46389E-6 11.611444 7 TATACCG 90 7.474495E-6 11.609964 5 CGTCTTA 135 4.7293724E-9 11.259994 15 AGAACCG 240 0.0 11.082239 5 AACCGCG 140 8.356437E-9 10.857455 7 ACCGTCG 275 0.0 10.709985 8 GTTCTAG 170 1.4006218E-10 10.616212 1 CGACCAT 215 0.0 10.605536 10 TCGGTTG 90 9.510449E-5 10.556628 17 GTCCTAA 495 0.0 10.554129 1 GTCGTAG 280 0.0 10.518352 11 TAAGACC 210 0.0 10.403166 4 GTACTAT 120 1.5274727E-6 10.290276 1 TATGCCG 75 0.0026508472 10.132333 5 >>END_MODULE