##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063878_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7423169 Sequences flagged as poor quality 0 Sequence length 25 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30945314595424 32.0 32.0 32.0 32.0 32.0 2 30.963347863964838 32.0 32.0 32.0 32.0 32.0 3 30.972674338951464 32.0 32.0 32.0 32.0 32.0 4 31.000253934673992 32.0 32.0 32.0 32.0 32.0 5 30.937968002614518 32.0 32.0 32.0 32.0 32.0 6 34.59347645190349 36.0 36.0 36.0 32.0 36.0 7 34.53856755787184 36.0 36.0 36.0 32.0 36.0 8 34.51619072662902 36.0 36.0 36.0 32.0 36.0 9 34.63127513330223 36.0 36.0 36.0 32.0 36.0 10 34.38544926028223 36.0 36.0 36.0 32.0 36.0 11 34.607306259631166 36.0 36.0 36.0 32.0 36.0 12 34.46373819591067 36.0 36.0 36.0 32.0 36.0 13 34.507714697051895 36.0 36.0 36.0 32.0 36.0 14 34.42399371481371 36.0 36.0 36.0 32.0 36.0 15 34.38259266359152 36.0 36.0 36.0 32.0 36.0 16 34.37593068405152 36.0 36.0 36.0 32.0 36.0 17 34.32633124747665 36.0 36.0 36.0 32.0 36.0 18 34.31009613279719 36.0 36.0 36.0 32.0 36.0 19 34.314446565880424 36.0 36.0 36.0 32.0 36.0 20 34.295512738562195 36.0 36.0 36.0 32.0 36.0 21 34.28616241931175 36.0 36.0 36.0 32.0 36.0 22 34.26208995107076 36.0 36.0 36.0 32.0 36.0 23 34.204267341885924 36.0 36.0 36.0 32.0 36.0 24 34.20297894335963 36.0 36.0 36.0 32.0 36.0 25 33.7956480581272 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 2 1.0 3 24.0 4 54.0 5 84.0 6 300.0 7 114.0 8 390.0 9 504.0 10 673.0 11 198.0 12 477.0 13 435.0 14 625.0 15 1097.0 16 1864.0 17 2421.0 18 3122.0 19 4051.0 20 6014.0 21 9109.0 22 14135.0 23 22150.0 24 33385.0 25 49789.0 26 71527.0 27 97606.0 28 133842.0 29 182213.0 30 241949.0 31 329476.0 32 468584.0 33 670851.0 34 1491929.0 35 3584176.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.875668689721905 17.362449875645105 12.13368201668532 25.628199417947666 2 15.850700443700788 20.033801283748236 38.854582404606354 25.26091586794462 3 18.589516991644956 24.410849434060886 28.336979628347343 28.66265394594682 4 12.470710527935957 16.498172072895066 36.02732036003772 35.003797039131264 5 14.145039354760309 37.25177103831306 33.77137189419927 14.83181771272736 6 32.699522590648364 35.9702899782839 18.058937702889544 13.2712497281782 7 30.507593030336146 30.77815911846119 20.5232866719118 18.19096117929086 8 27.996261697356505 33.58750377334081 19.208231812497303 19.20800271680538 9 27.937586174828255 15.139342085932899 18.480910464437677 38.442161274801165 10 15.367147427926586 28.57454225777845 32.35155163347895 23.706758680816012 11 35.474067121026934 22.351651337713754 22.697422158770173 19.47685938248914 12 24.61180203764164 24.81347679682087 29.04952294166651 21.52519822387098 13 29.419480143785314 21.148427627852378 25.121786958220245 24.310305270142063 14 23.442635680023855 20.120562226495867 26.296245469513803 30.14055662396648 15 24.533396596717495 27.954337136325403 22.88653568270537 24.62573058425173 16 24.3812820975646 27.29487181733905 24.315592334154243 24.008253750942107 17 23.472901045200917 26.890327099440075 25.445111517483777 24.191660337875234 18 23.42669183981294 27.006558068376265 26.438881509871077 23.127868581939723 19 24.951402947922322 25.808698221844683 26.192176450945055 23.047722379287944 20 25.704043250239305 25.523087916088066 25.68062502527874 23.09224380839389 21 25.982967513707283 25.062655121137727 25.20460149455551 23.74977587059948 22 25.4216669951759 25.487687914248575 25.515420205556005 23.575224885019523 23 24.751068256367507 25.642197586002847 25.506563104481828 24.100171053147818 24 24.247107745090055 26.02301400653275 25.73091688781346 23.998961360563733 25 24.494091117997925 25.772249090751963 25.68797419794259 24.045685593307514 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 163.0 1 163.0 2 583.5 3 1004.0 4 1004.0 5 1004.0 6 2473.5 7 3943.0 8 3943.0 9 3943.0 10 5475.0 11 7007.0 12 7007.0 13 7007.0 14 11024.0 15 15041.0 16 15041.0 17 15041.0 18 30527.5 19 46014.0 20 46014.0 21 46014.0 22 73633.0 23 101252.0 24 101252.0 25 101252.0 26 153009.5 27 204767.0 28 204767.0 29 204767.0 30 277037.0 31 349307.0 32 349307.0 33 349307.0 34 432391.5 35 515476.0 36 515476.0 37 515476.0 38 612348.0 39 709220.0 40 709220.0 41 709220.0 42 801878.0 43 894536.0 44 894536.0 45 894536.0 46 972441.0 47 1050346.0 48 1050346.0 49 1050346.0 50 1063638.0 51 1076930.0 52 1076930.0 53 1076930.0 54 990934.0 55 904938.0 56 904938.0 57 904938.0 58 786204.0 59 667470.0 60 667470.0 61 667470.0 62 551908.5 63 436347.0 64 436347.0 65 436347.0 66 340645.5 67 244944.0 68 244944.0 69 244944.0 70 178392.5 71 111841.0 72 111841.0 73 111841.0 74 79799.5 75 47758.0 76 47758.0 77 47758.0 78 33868.0 79 19978.0 80 19978.0 81 19978.0 82 13691.5 83 7405.0 84 7405.0 85 7405.0 86 5038.0 87 2671.0 88 2671.0 89 2671.0 90 1915.0 91 1159.0 92 1159.0 93 1159.0 94 895.0 95 631.0 96 631.0 97 631.0 98 1826.0 99 3021.0 100 3021.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.038716618199046794 2 0.005038279473362387 3 0.0014683755684398402 4 0.003771973937276654 5 0.009254807481818075 6 0.013835061548511156 7 0.022793499649543206 8 0.036224421133346146 9 0.0492916165589117 10 0.05806145596307992 11 0.05513817616169052 12 0.06451422566292106 13 0.06583441654096789 14 0.06858256898098374 15 0.05993397159622797 16 0.06689865204469951 17 0.06319403478487422 18 0.07733893704966167 19 0.0746042559451361 20 0.07906326799241672 21 0.07515658070023733 22 0.07844358655986412 23 0.08319896798793076 24 0.07777001978535043 25 0.07781043379182126 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 7423169.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.233840691182266 #Duplication Level Percentage of deduplicated Percentage of total 1 58.641714676349046 20.075311180878984 2 15.49770096873096 10.610916520862336 3 7.906368678682741 8.119960973753345 4 4.665100145894078 6.388171808117961 5 3.045683995185218 5.213273034342715 6 2.1046146318822743 4.322942521451339 7 1.5237923661370318 3.6515685576142376 8 1.1696739808071106 3.2033946175657286 9 0.8977710189208744 2.7660735035007837 >10 4.307547012751663 24.82158228669075 >50 0.16130080464865415 3.7547024050834708 >100 0.07288930987736504 4.575721725938814 >500 0.0038292718050180804 0.9010633725765377 >1k 0.0018947184280626067 1.2959995224077119 >5k 1.1841989968094704E-4 0.299317969215349 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 9940 0.1339050747733212 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3471335490273763E-5 2 2.6942670980547525E-5 0.0 0.0 0.0 1.3471335490273763E-5 3 2.6942670980547525E-5 0.0 0.0 0.0 1.3471335490273763E-5 4 2.6942670980547525E-5 0.0 0.0 0.0 1.3471335490273763E-5 5 4.041400647082129E-5 0.0 0.0 0.0 1.3471335490273763E-5 6 6.735667745136882E-5 1.3471335490273763E-5 0.0 0.0 5.388534196109505E-5 7 6.735667745136882E-5 1.3471335490273763E-5 0.0 1.3471335490273763E-5 5.388534196109505E-5 8 1.7512736137355892E-4 1.3471335490273763E-5 0.0 1.3471335490273763E-5 8.082801294164258E-5 9 1.885986968638327E-4 1.3471335490273763E-5 0.0 6.735667745136882E-5 9.429934843191635E-5 10 1.885986968638327E-4 1.3471335490273763E-5 0.0 8.082801294164258E-5 9.429934843191635E-5 11 2.155413678443802E-4 1.3471335490273763E-5 0.0 8.082801294164258E-5 9.429934843191635E-5 12 2.155413678443802E-4 1.3471335490273763E-5 0.0 1.3471335490273763E-4 9.429934843191635E-5 13 2.155413678443802E-4 1.3471335490273763E-5 0.0 1.7512736137355892E-4 1.077706839221901E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3340 0.0 15.494981 1 GTATCAA 12280 0.0 13.702706 1 CGCGTAA 120 7.403287E-10 12.668087 10 TCGCGTA 125 1.4115358E-9 12.1611185 9 GCGGTAA 130 3.2627213E-8 10.963951 15 ACCGCGC 110 6.048338E-6 10.3644495 8 TAGGACC 1195 0.0 9.934267 4 ACCGTAC 135 6.4469714E-7 9.852625 8 GCACCGT 340 0.0 9.7783985 6 GTATTAG 645 0.0 9.569619 1 GTAGGAC 1345 0.0 9.531179 3 TATCAAC 17845 0.0 9.3856535 2 GACCGCG 285 0.0 9.333373 7 GCGATTC 210 6.675691E-10 9.048635 13 CCTATAC 715 0.0 9.031045 3 GTCGCGT 200 2.6593625E-9 9.025708 8 ATCAACG 18590 0.0 8.9697485 3 TGCGATT 255 3.6379788E-12 8.94242 12 TCAACGC 18735 0.0 8.871112 4 GCGTAAC 150 2.7013866E-6 8.867721 11 >>END_MODULE