##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063878_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7423169 Sequences flagged as poor quality 0 Sequence length 50 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35678468319932 32.0 32.0 32.0 32.0 32.0 2 31.451666532177835 32.0 32.0 32.0 32.0 32.0 3 31.508669141171378 32.0 32.0 32.0 32.0 32.0 4 31.583872602119122 32.0 32.0 32.0 32.0 32.0 5 31.551113682040647 32.0 32.0 32.0 32.0 32.0 6 35.14017315246359 36.0 36.0 36.0 36.0 36.0 7 35.15916773550488 36.0 36.0 36.0 36.0 36.0 8 35.109425772200524 36.0 36.0 36.0 36.0 36.0 9 35.204076183635316 36.0 36.0 36.0 36.0 36.0 10 35.084546505677025 36.0 36.0 36.0 36.0 36.0 11 35.20642477626469 36.0 36.0 36.0 36.0 36.0 12 35.132520625624984 36.0 36.0 36.0 36.0 36.0 13 35.16005361052672 36.0 36.0 36.0 36.0 36.0 14 35.10818937302923 36.0 36.0 36.0 36.0 36.0 15 35.08982363192863 36.0 36.0 36.0 36.0 36.0 16 35.104433968834606 36.0 36.0 36.0 36.0 36.0 17 35.076305685617555 36.0 36.0 36.0 36.0 36.0 18 35.071206380994425 36.0 36.0 36.0 36.0 36.0 19 35.06001385661568 36.0 36.0 36.0 36.0 36.0 20 35.05588960725534 36.0 36.0 36.0 36.0 36.0 21 35.0511460806025 36.0 36.0 36.0 36.0 36.0 22 35.03286978916956 36.0 36.0 36.0 36.0 36.0 23 34.98591464103808 36.0 36.0 36.0 36.0 36.0 24 34.97228690334276 36.0 36.0 36.0 36.0 36.0 25 34.940143623296194 36.0 36.0 36.0 36.0 36.0 26 34.88660745835101 36.0 36.0 36.0 36.0 36.0 27 34.868440284735534 36.0 36.0 36.0 32.0 36.0 28 34.85476997762007 36.0 36.0 36.0 32.0 36.0 29 34.82981217321066 36.0 36.0 36.0 32.0 36.0 30 34.815112925490446 36.0 36.0 36.0 32.0 36.0 31 34.8013702773034 36.0 36.0 36.0 32.0 36.0 32 34.768187414297046 36.0 36.0 36.0 32.0 36.0 33 34.75494266666972 36.0 36.0 36.0 32.0 36.0 34 34.74521690129916 36.0 36.0 36.0 32.0 36.0 35 34.71758746163532 36.0 36.0 36.0 32.0 36.0 36 34.69083891259919 36.0 36.0 36.0 32.0 36.0 37 34.67724539209602 36.0 36.0 36.0 32.0 36.0 38 34.65665472522584 36.0 36.0 36.0 32.0 36.0 39 34.644979118756424 36.0 36.0 36.0 32.0 36.0 40 34.6348944770084 36.0 36.0 36.0 32.0 36.0 41 34.6172498564966 36.0 36.0 36.0 32.0 36.0 42 34.57947151681445 36.0 36.0 36.0 32.0 36.0 43 34.561273763267415 36.0 36.0 36.0 32.0 36.0 44 34.528099791342484 36.0 36.0 36.0 32.0 36.0 45 34.49956709863402 36.0 36.0 36.0 32.0 36.0 46 34.48491338402776 36.0 36.0 36.0 32.0 36.0 47 34.45257126706936 36.0 36.0 36.0 32.0 36.0 48 34.424661219487255 36.0 36.0 36.0 32.0 36.0 49 34.407157643858035 36.0 36.0 36.0 32.0 36.0 50 33.84319486731341 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 0.0 16 0.0 17 7.0 18 8.0 19 18.0 20 93.0 21 311.0 22 945.0 23 2644.0 24 6602.0 25 14011.0 26 27495.0 27 49157.0 28 80197.0 29 121495.0 30 172850.0 31 243175.0 32 346843.0 33 549705.0 34 1165335.0 35 4642277.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.94561165067379 18.269546857165643 12.64765970151184 26.13718179064872 2 15.23252436705996 20.716648597035 38.286055920301074 25.764771115603974 3 17.844139605016366 24.9504152082211 28.60638680946871 28.599058377293822 4 12.181118333692794 17.1557996322056 35.897875961061914 34.76520607303969 5 13.801356267114489 37.70485354704978 33.50353467636262 14.99025550947311 6 32.8616784725199 36.25334999112238 17.77332115162908 13.111650384728648 7 30.463326626849867 30.885222139074102 20.493253214767556 18.158198019308475 8 28.022177057312597 33.811956540921145 19.030408449654978 19.135457952111278 9 27.938837778770775 15.00101238313643 18.40427671590185 38.65587312219094 10 15.222200039175082 28.795301576729678 32.390544848867435 23.591953535227802 11 35.70843819086921 22.26689767318989 22.610080037267114 19.41458409867379 12 24.58788087063227 24.856499734546905 29.020496265941837 21.535123128878993 13 29.512718468810107 21.088442064020867 25.15556081238915 24.243278654779875 14 23.507025520563975 20.07006189150672 26.21227831684954 30.210634271079762 15 24.559348916173807 28.002904016436876 22.81459493241318 24.623152134976138 16 24.48579819743943 27.306773295871935 24.24030800041007 23.96712050627857 17 23.538868642220052 26.90985480729322 25.378621987455762 24.172654563030964 18 23.52693857833323 27.01197039637911 26.390023852420523 23.07106717286714 19 25.025531555466824 25.813820435401762 26.149580091623964 23.011067917507447 20 25.82337257285608 25.49372717269593 25.62421124895058 23.058689005497413 21 26.02943567632638 25.101099005020632 25.165747944038458 23.703717374614534 22 25.516717482871503 25.449832194038198 25.48473648071838 23.548713842371917 23 24.855805066096952 25.57616341719799 25.45432770707591 24.113703809629143 24 24.370609163519973 26.060583608262284 25.593085396591462 23.97572183162628 25 24.589743444665107 25.68575022787166 25.69779381433855 24.02671251312468 26 24.172491094956595 26.00218786543011 25.776557506911175 24.04876353270212 27 24.344112345772654 26.024950129514394 25.41256063977565 24.2183768849373 28 24.239899284171273 25.824220162969418 25.752697913810906 24.1831826390484 29 24.273767442574776 25.941893312421755 25.488464840567854 24.29587440443562 30 24.152367239362256 26.0563784435965 25.641877819312864 24.149376497728383 31 24.515761716489706 25.5282455547806 25.662227588389406 24.293765140340287 32 24.21221681284907 25.98759679145048 25.706359682270502 24.093826713429948 33 24.220436832625992 25.85485103214496 25.649700525795843 24.275011609433207 34 24.302475023440785 25.840298209878537 25.95866069600267 23.898566070678005 35 24.236325638784848 25.82357633294854 25.845292734260628 24.09480529400599 36 24.184661174153653 25.799704119411704 25.975761287604637 24.03987341883001 37 24.472866752904462 25.421419647290826 25.71053900059896 24.395174599205756 38 24.286185049892342 25.854668900929624 25.750042235976643 24.10910381320139 39 24.392690529247275 25.744298392682175 25.68293392994051 24.180077148130042 40 24.376121346119184 25.64469234667718 25.891843160943868 24.087343146259773 41 24.26332551924654 25.645760111352423 25.925879024141313 24.165035345259728 42 24.106014972059242 25.652998433118995 25.96828760019329 24.27269899462847 43 24.114457641425837 25.389723777656652 26.045476014127832 24.45034256678968 44 23.834133651978927 25.523431295748335 26.137461715715233 24.50497333655751 45 23.919647435042517 25.48708178781709 26.129375302940044 24.463895474200353 46 23.912093448702766 25.44131772262569 26.07443510873475 24.572153719936793 47 23.86339234353719 25.52316378396365 26.222233298890878 24.39121057360828 48 23.798904326463617 25.731704129885784 26.116561278208554 24.352830265442044 49 23.935301737702233 25.4050040306415 26.0977301237644 24.561964107891868 50 23.584392980262884 25.779010571097942 26.225092852418204 24.41150359622097 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 3.0 1 30.0 2 57.0 3 170.0 4 283.0 5 389.5 6 496.0 7 538.0 8 580.0 9 758.5 10 937.0 11 1385.5 12 1834.0 13 3569.0 14 5304.0 15 6983.5 16 8663.0 17 8642.5 18 8622.0 19 8801.5 20 8981.0 21 10783.0 22 12585.0 23 17003.5 24 21422.0 25 29019.0 26 36616.0 27 47681.5 28 58747.0 29 74927.0 30 91107.0 31 114823.0 32 138539.0 33 166007.5 34 193476.0 35 225498.5 36 257521.0 37 288796.0 38 320071.0 39 355042.5 40 390014.0 41 427306.0 42 464598.0 43 488254.5 44 511911.0 45 542224.0 46 572537.0 47 593519.5 48 614502.0 49 618923.5 50 623345.0 51 618546.0 52 613747.0 53 590044.0 54 566341.0 55 530995.5 56 495650.0 57 455565.0 58 415480.0 59 369997.0 60 324514.0 61 276808.0 62 229102.0 63 194671.5 64 160241.0 65 134620.0 66 108999.0 67 89689.5 68 70380.0 69 55258.5 70 40137.0 71 30640.5 72 21144.0 73 17446.5 74 13749.0 75 11110.0 76 8471.0 77 7009.5 78 5548.0 79 4379.0 80 3210.0 81 2502.0 82 1794.0 83 1340.5 84 887.0 85 671.5 86 456.0 87 336.5 88 217.0 89 160.5 90 104.0 91 85.5 92 67.0 93 62.5 94 58.0 95 61.0 96 64.0 97 52.5 98 41.0 99 29.0 100 17.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009389520836720813 2 4.445540711790342E-4 3 3.5025472274711783E-4 4 0.0 5 0.0 6 2.0207003235410642E-4 7 5.388534196109505E-5 8 2.6942670980547525E-5 9 0.0012124201941246388 10 0.0011181208456927222 11 2.6942670980547525E-5 12 1.6165602588328516E-4 13 3.637260582373916E-4 14 2.424840388249277E-4 15 0.004661082079634722 16 8.352228003969732E-4 17 0.0 18 3.0984071627629655E-4 19 2.6942670980547525E-5 20 5.523247551012244E-4 21 0.0 22 1.6165602588328516E-4 23 7.813374584358783E-4 24 5.253820841206768E-4 25 0.0017647449492258628 26 0.005509776215521969 27 0.005954330286701003 28 0.004095285989043224 29 0.0022631843623659924 30 0.003516018562961452 31 0.007166750480825643 32 0.0033813052080587146 33 0.004391655369829247 34 0.0028155091174672164 35 0.0028020377819769427 36 0.007813374584358782 37 0.0038123879437474747 38 0.0079076739327907 39 0.004122228660023771 40 0.0023035983688368135 41 0.003367833872568441 42 0.0019129296396188744 43 0.0012258915296149123 44 0.0011315921811829962 45 0.0011181208456927222 46 7.948087939261521E-4 47 0.0021419423429535284 48 0.002088057000992433 49 4.445540711790342E-4 50 0.0013336622135371025 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 7423169.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.910434429454426 #Duplication Level Percentage of deduplicated Percentage of total 1 61.22687890307499 23.21137577975171 2 15.141056113973772 11.480080300029854 3 7.387319944071316 8.401695250473496 4 4.321001434979034 6.552441662814047 5 2.769485683557997 5.249620270491911 6 1.9699645667661965 4.48093275220431 7 1.404971432960119 3.7284154169143857 8 1.0313804489191036 3.1280064704455155 9 0.7698550474279845 2.626698536613282 >10 3.8006638449292 23.96650424395253 >50 0.12146986911819753 3.1238199982946315 >100 0.054342015251209755 3.6062179440146447 >500 0.0014317548181996638 0.3489618099465583 >1k 1.7894015256444653E-4 0.09522956405322418 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.6942670980547525E-5 2 2.6942670980547525E-5 0.0 0.0 0.0 2.6942670980547525E-5 3 2.6942670980547525E-5 0.0 0.0 0.0 2.6942670980547525E-5 4 2.6942670980547525E-5 0.0 0.0 0.0 5.388534196109505E-5 5 2.6942670980547525E-5 0.0 0.0 0.0 5.388534196109505E-5 6 4.041400647082129E-5 0.0 0.0 0.0 5.388534196109505E-5 7 4.041400647082129E-5 0.0 0.0 1.3471335490273763E-5 6.735667745136882E-5 8 1.7512736137355892E-4 0.0 0.0 1.3471335490273763E-5 6.735667745136882E-5 9 1.7512736137355892E-4 0.0 0.0 6.735667745136882E-5 8.082801294164258E-5 10 1.7512736137355892E-4 0.0 0.0 8.082801294164258E-5 8.082801294164258E-5 11 1.885986968638327E-4 0.0 0.0 9.429934843191635E-5 8.082801294164258E-5 12 1.885986968638327E-4 0.0 0.0 1.7512736137355892E-4 8.082801294164258E-5 13 1.885986968638327E-4 0.0 0.0 2.2901270333465398E-4 9.429934843191635E-5 14 2.155413678443802E-4 0.0 0.0 2.6942670980547527E-4 1.3471335490273763E-4 15 2.2901270333465398E-4 0.0 0.0 3.906687292179391E-4 1.885986968638327E-4 16 2.2901270333465398E-4 0.0 0.0 4.8496807764985547E-4 2.155413678443802E-4 17 4.310827356887604E-4 0.0 0.0 4.984394131401292E-4 2.155413678443802E-4 18 4.310827356887604E-4 0.0 0.0 6.331527680428668E-4 2.155413678443802E-4 19 4.5802540666930796E-4 0.0 0.0 6.600954390234144E-4 2.155413678443802E-4 20 4.5802540666930796E-4 0.0 0.0 9.160508133386159E-4 2.155413678443802E-4 21 4.714967421595817E-4 0.0 0.0 9.968788262802585E-4 2.4248403882492773E-4 22 4.8496807764985547E-4 0.0 0.0 0.0013336622135371025 2.4248403882492773E-4 23 4.8496807764985547E-4 0.0 0.0 0.0016030889233425779 2.8289804529574905E-4 24 4.8496807764985547E-4 0.0 0.0 0.0020745856655021593 2.9636938078602277E-4 25 5.11910748630403E-4 0.0 0.0 0.0024248403882492775 2.9636938078602277E-4 26 5.11910748630403E-4 0.0 0.0 0.002909808465899133 3.0984071627629655E-4 27 6.331527680428668E-4 0.0 0.0 0.00365073191786419 3.2331205176657033E-4 28 6.331527680428668E-4 0.0 0.0 0.00565796090591498 3.2331205176657033E-4 29 7.543947874553308E-4 0.0 0.0 0.008998852107502875 3.2331205176657033E-4 30 7.543947874553308E-4 0.0 0.0 0.01771480616971 3.2331205176657033E-4 31 7.543947874553308E-4 0.0 0.0 0.0454388146086934 3.5025472274711783E-4 32 7.678661229456045E-4 0.0 0.0 0.0773254657141714 3.637260582373916E-4 33 7.678661229456045E-4 0.0 0.0 0.1108017344075017 3.637260582373916E-4 34 8.082801294164258E-4 0.0 0.0 0.14877742915458345 3.637260582373916E-4 35 8.756368068677946E-4 1.3471335490273763E-5 0.0 0.19301729490464248 3.637260582373916E-4 36 9.160508133386159E-4 1.3471335490273763E-5 0.0 0.2582589726840383 3.637260582373916E-4 37 9.160508133386159E-4 1.3471335490273763E-5 0.0 0.36368564423092076 3.637260582373916E-4 38 9.160508133386159E-4 1.3471335490273763E-5 0.0 0.5170702701231779 3.637260582373916E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3980 0.0 30.455189 1 GTATCAA 12350 0.0 29.818188 1 TATCAAC 18885 0.0 19.42891 2 ATCAACG 19320 0.0 18.877981 3 TCAACGC 19540 0.0 18.62053 4 CAACGCA 20160 0.0 18.069698 5 AACGCAG 20790 0.0 17.553991 6 GTAGGAC 1940 0.0 14.740756 3 ACGCAGA 25300 0.0 14.424899 7 CGCAGAG 26030 0.0 14.003362 8 TAGGACC 1890 0.0 13.966916 4 AGAGTAC 26405 0.0 13.872165 11 TAGGACG 895 0.0 13.764045 4 GTATAGG 1195 0.0 13.622493 1 ACGACGT 195 2.4118162E-7 13.538167 41 CGACGTT 195 2.4125984E-7 13.537803 42 CAGAGTA 27235 0.0 13.497961 10 ACGTCGA 115 0.0014251602 13.391193 15 GTATTAG 1145 0.0 13.256728 1 AGTACAT 24875 0.0 12.983034 13 >>END_MODULE