##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063876_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3501900 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.220479168451412 32.0 32.0 32.0 32.0 32.0 2 30.769545104086355 32.0 32.0 32.0 32.0 32.0 3 30.798277792055742 32.0 32.0 32.0 32.0 32.0 4 30.833055769725007 32.0 32.0 32.0 32.0 32.0 5 30.71090722179388 32.0 32.0 32.0 32.0 32.0 6 34.38221765327394 36.0 36.0 36.0 32.0 36.0 7 34.317783774522404 36.0 36.0 36.0 32.0 36.0 8 34.280104800251294 36.0 36.0 36.0 32.0 36.0 9 34.43588109312088 36.0 36.0 36.0 32.0 36.0 10 34.092434963876755 36.0 36.0 36.0 32.0 36.0 11 34.413254518975414 36.0 36.0 36.0 32.0 36.0 12 34.21119877780633 36.0 36.0 36.0 32.0 36.0 13 34.30060481452926 36.0 36.0 36.0 32.0 36.0 14 34.18788971701076 36.0 36.0 36.0 32.0 36.0 15 34.12291413232816 36.0 36.0 36.0 32.0 36.0 16 34.128267797481364 36.0 36.0 36.0 32.0 36.0 17 34.0426768325766 36.0 36.0 36.0 32.0 36.0 18 34.038018504240554 36.0 36.0 36.0 32.0 36.0 19 34.05904623204546 36.0 36.0 36.0 32.0 36.0 20 34.04319940603672 36.0 36.0 36.0 32.0 36.0 21 34.033277934835375 36.0 36.0 36.0 32.0 36.0 22 34.006290870670206 36.0 36.0 36.0 32.0 36.0 23 33.95036009023673 36.0 36.0 36.0 32.0 36.0 24 33.93545789428596 36.0 36.0 36.0 32.0 36.0 25 33.52041491761615 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 7.0 4 24.0 5 46.0 6 146.0 7 54.0 8 187.0 9 217.0 10 322.0 11 113.0 12 226.0 13 179.0 14 313.0 15 579.0 16 968.0 17 1300.0 18 1858.0 19 2471.0 20 3909.0 21 5997.0 22 9156.0 23 14053.0 24 21158.0 25 30265.0 26 42723.0 27 55479.0 28 74842.0 29 99048.0 30 129663.0 31 174148.0 32 242652.0 33 339178.0 34 713722.0 35 1536897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.167925349751634 17.320376267967514 11.67758515679546 25.83411322548539 2 16.877526274396022 19.788514029479412 37.19201370306634 26.141945993058226 3 18.56979310608728 24.20888086644661 28.445335784613988 28.775990242852124 4 12.967457491013878 15.66256562003022 35.47229716010874 35.89767972884717 5 15.078237471452196 36.26656857769757 33.08780628647101 15.567387664379225 6 33.93701846583647 34.88722779405838 17.322192390043064 13.853561350062074 7 30.551110933389698 30.189739825369667 20.940273227633522 18.318876013607113 8 28.463938667583065 32.16826765002381 19.414961917192212 19.952831765200916 9 27.59932151925062 14.522882154682067 18.52077025907005 39.35702606699726 10 16.4059479804576 26.34944028032985 30.83148350642037 26.413128232792182 11 36.67724012688152 21.120910593784266 22.81144516591342 19.39040411342079 12 25.389398441520445 23.165003330292112 28.40311993080536 23.042478297382086 13 29.283356907119284 19.505293386481508 25.35004929064335 25.86130041575586 14 24.181870812126967 19.379409687961758 25.057500430771025 31.381219069140247 15 25.333984038484562 26.83610144942858 22.124994249659906 25.70492026242695 16 25.966089567524257 25.49900387818853 23.33639656506567 25.19850998922154 17 24.349159133802807 25.780724726509536 24.867180144385248 25.002935995302405 18 25.003693732029674 24.824422698976413 25.762644923611905 24.409238645382008 19 25.867185783128466 24.669081830857156 25.097484367493987 24.366248018520388 20 26.202883490917074 23.999911977164363 24.60129656493742 25.195907966981146 21 27.05845437741979 23.85750652420672 24.229040521525025 24.85499857684847 22 26.366340139468274 23.7256965769086 24.551897933982197 25.35606534964093 23 24.76425481371736 23.830533827987395 25.231929822455545 26.1732815358397 24 25.04555969770708 24.61261039849911 24.85797691222846 25.48385299156535 25 25.21347284503096 24.13138364468928 24.92603218432325 25.72911132595651 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 235.0 1 235.0 2 652.5 3 1070.0 4 1070.0 5 1070.0 6 2530.5 7 3991.0 8 3991.0 9 3991.0 10 4369.5 11 4748.0 12 4748.0 13 4748.0 14 5992.5 15 7237.0 16 7237.0 17 7237.0 18 13103.0 19 18969.0 20 18969.0 21 18969.0 22 31430.5 23 43892.0 24 43892.0 25 43892.0 26 65811.5 27 87731.0 28 87731.0 29 87731.0 30 112147.0 31 136563.0 32 136563.0 33 136563.0 34 174113.0 35 211663.0 36 211663.0 37 211663.0 38 248480.0 39 285297.0 40 285297.0 41 285297.0 42 327504.0 43 369711.0 44 369711.0 45 369711.0 46 414023.5 47 458336.0 48 458336.0 49 458336.0 50 471293.5 51 484251.0 52 484251.0 53 484251.0 54 454985.5 55 425720.0 56 425720.0 57 425720.0 58 390601.0 59 355482.0 60 355482.0 61 355482.0 62 310665.5 63 265849.0 64 265849.0 65 265849.0 66 215674.0 67 165499.0 68 165499.0 69 165499.0 70 125569.5 71 85640.0 72 85640.0 73 85640.0 74 64569.0 75 43498.0 76 43498.0 77 43498.0 78 34826.0 79 26154.0 80 26154.0 81 26154.0 82 17948.0 83 9742.0 84 9742.0 85 9742.0 86 7493.5 87 5245.0 88 5245.0 89 5245.0 90 3891.5 91 2538.0 92 2538.0 93 2538.0 94 1761.0 95 984.0 96 984.0 97 984.0 98 1419.5 99 1855.0 100 1855.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.04043519232416688 2 0.005768297210085953 3 0.0016276878266084124 4 0.0031697078728690135 5 0.009052228790085382 6 0.013164282246780318 7 0.022559182158256946 8 0.03538079328364602 9 0.04931608555355664 10 0.05776863988120734 11 0.05545560981181644 12 0.06302293040920642 13 0.0642508352608584 14 0.0674205431337274 15 0.060167337730946055 16 0.06647819754990149 17 0.06382249635911934 18 0.07792912418972558 19 0.07484508409720438 20 0.08018504240555127 21 0.07493075187755219 22 0.07861446643250806 23 0.08249807247494217 24 0.07553042633998687 25 0.07832890716468202 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 3501900.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.44914577469265 #Duplication Level Percentage of deduplicated Percentage of total 1 72.71268338183944 31.593039799266144 2 14.021808384925738 12.184711930828923 3 4.996549595160527 6.512874351918339 4 2.463343410662237 4.281206677719685 5 1.3491081663547309 2.9308798692887503 6 0.8536475913663448 2.2254155182494952 7 0.5995947899017812 1.8236317002532094 8 0.44126491551761093 1.5338066911665693 9 0.327189402242234 1.2794490030561636 >10 2.002590851942008 16.00597384735186 >50 0.13585869155228433 4.042436276198625 >100 0.07744341392299942 6.8050109146318105 >500 0.011906058848686396 3.5706328488087227 >1k 0.006945200992061657 5.0094965503262285 >5k 6.614477135296816E-5 0.20143402093556537 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 7009 0.20014849081926955 No Hit TATCAACGCAGAGTACTTTTTTTTT 4718 0.1347268625603244 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.4277963391301864E-4 2 0.0 0.0 0.0 0.0 1.4277963391301864E-4 3 0.0 0.0 0.0 0.0 1.4277963391301864E-4 4 0.0 0.0 0.0 0.0 1.4277963391301864E-4 5 2.8555926782603728E-5 0.0 0.0 0.0 1.713355606956224E-4 6 1.998914874782261E-4 0.0 0.0 0.0 2.2844741426082983E-4 7 1.998914874782261E-4 0.0 0.0 0.0 2.2844741426082983E-4 8 1.998914874782261E-4 0.0 0.0 0.0 2.5700334104343357E-4 9 1.998914874782261E-4 0.0 0.0 0.0 2.5700334104343357E-4 10 1.998914874782261E-4 0.0 0.0 0.0 2.5700334104343357E-4 11 1.998914874782261E-4 0.0 0.0 0.0 2.5700334104343357E-4 12 1.998914874782261E-4 0.0 0.0 0.0 3.712270481738485E-4 13 1.998914874782261E-4 0.0 0.0 0.0 3.712270481738485E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 5025 0.0 12.023148 1 GGTATCA 1930 0.0 11.861972 1 CGGCCGA 60 0.0058701946 11.08535 17 GCGTTAT 235 0.0 10.509998 1 ACGGTAT 495 0.0 10.364338 9 GTATTAG 535 0.0 10.298438 1 CGAGCCG 600 0.0 10.292805 15 GTATAGG 260 0.0 10.230147 1 GCATCGC 475 0.0 10.200982 14 TAAATCC 515 0.0 10.142984 4 GTCCTAT 695 0.0 10.114491 1 TTACCGC 675 0.0 9.853082 16 CGGTTCT 675 0.0 9.852659 12 TATAAGC 185 6.548362E-10 9.753098 2 GTCCTAC 390 0.0 9.742996 1 GCGTAAC 215 1.0913936E-11 9.721588 11 CGTTATT 215 1.0913936E-11 9.717284 2 GGTTCTA 685 0.0 9.708687 13 CGAACGA 245 0.0 9.695087 16 ACCGTCG 500 0.0 9.690655 8 >>END_MODULE