##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063875_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2187718 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.35659714826134 32.0 32.0 32.0 32.0 32.0 2 31.460205565799615 32.0 32.0 32.0 32.0 32.0 3 31.515264307374167 32.0 32.0 32.0 32.0 32.0 4 31.58456162997242 32.0 32.0 32.0 32.0 32.0 5 31.563185474544706 32.0 32.0 32.0 32.0 32.0 6 35.15251417230191 36.0 36.0 36.0 36.0 36.0 7 35.167337380777596 36.0 36.0 36.0 36.0 36.0 8 35.11196827013354 36.0 36.0 36.0 36.0 36.0 9 35.21103314046874 36.0 36.0 36.0 36.0 36.0 10 35.0861971241266 36.0 36.0 36.0 36.0 36.0 11 35.20149443392613 36.0 36.0 36.0 36.0 36.0 12 35.12854124708943 36.0 36.0 36.0 36.0 36.0 13 35.15467898513428 36.0 36.0 36.0 36.0 36.0 14 35.10909404228516 36.0 36.0 36.0 36.0 36.0 15 35.085366578324994 36.0 36.0 36.0 36.0 36.0 16 35.10129413388746 36.0 36.0 36.0 36.0 36.0 17 35.07285308252709 36.0 36.0 36.0 36.0 36.0 18 35.072188920144185 36.0 36.0 36.0 36.0 36.0 19 35.06020200044064 36.0 36.0 36.0 36.0 36.0 20 35.05479271094355 36.0 36.0 36.0 36.0 36.0 21 35.053648596391305 36.0 36.0 36.0 36.0 36.0 22 35.037986614362545 36.0 36.0 36.0 36.0 36.0 23 34.99073738022908 36.0 36.0 36.0 36.0 36.0 24 34.967762755528824 36.0 36.0 36.0 36.0 36.0 25 34.940515642326844 36.0 36.0 36.0 36.0 36.0 26 34.88987566039133 36.0 36.0 36.0 32.0 36.0 27 34.87084989930146 36.0 36.0 36.0 32.0 36.0 28 34.85733124653177 36.0 36.0 36.0 32.0 36.0 29 34.836413102602805 36.0 36.0 36.0 32.0 36.0 30 34.82829505448143 36.0 36.0 36.0 32.0 36.0 31 34.81053362453479 36.0 36.0 36.0 32.0 36.0 32 34.78196184334544 36.0 36.0 36.0 32.0 36.0 33 34.76921522792243 36.0 36.0 36.0 32.0 36.0 34 34.76218232880106 36.0 36.0 36.0 32.0 36.0 35 34.726920471468446 36.0 36.0 36.0 32.0 36.0 36 34.71162233889377 36.0 36.0 36.0 32.0 36.0 37 34.69198086773524 36.0 36.0 36.0 32.0 36.0 38 34.67099507340526 36.0 36.0 36.0 32.0 36.0 39 34.66071906891108 36.0 36.0 36.0 32.0 36.0 40 34.648692838839374 36.0 36.0 36.0 32.0 36.0 41 34.63008440758818 36.0 36.0 36.0 32.0 36.0 42 34.59453137927283 36.0 36.0 36.0 32.0 36.0 43 34.579629092963536 36.0 36.0 36.0 32.0 36.0 44 34.541842230122896 36.0 36.0 36.0 32.0 36.0 45 34.51571134853761 36.0 36.0 36.0 32.0 36.0 46 34.49515019760317 36.0 36.0 36.0 32.0 36.0 47 34.472539879454295 36.0 36.0 36.0 32.0 36.0 48 34.435247138799426 36.0 36.0 36.0 32.0 36.0 49 34.41866867667588 36.0 36.0 36.0 32.0 36.0 50 33.84988513144747 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 0.0 18 3.0 19 7.0 20 25.0 21 80.0 22 249.0 23 671.0 24 1751.0 25 4019.0 26 7937.0 27 14344.0 28 23406.0 29 35847.0 30 50842.0 31 71362.0 32 102370.0 33 161629.0 34 340133.0 35 1373042.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.67453437841999 18.093710371537266 12.430594476083723 26.80116077395902 2 15.56900542667408 20.426957478863763 37.78852060965977 26.215516484802386 3 18.194459046217275 23.89973991068286 29.20720753664791 28.698593506451953 4 12.828892937755231 16.830322738122554 35.60870276699282 34.73208155712939 5 14.411683772771443 36.628669691431895 33.85495754023142 15.10468899556524 6 33.89416253411668 35.48404201099504 17.108551258780288 13.51324419610799 7 29.871838940703455 30.85651885345264 20.691351162582347 18.580291043261557 8 27.39896092640825 34.09401943029221 19.42695539370248 19.08006424959707 9 27.436132667245356 14.838970077693503 18.321396133563166 39.403501121497975 10 15.656120097234805 27.634257807536155 32.41312541882 24.296496676409042 11 36.498081331434854 21.394102979592862 23.003133406316636 19.104682282655645 12 24.84231264127183 23.50648964787461 29.366028024674147 22.285169686179415 13 29.622143357340192 20.266918619852376 24.976642220991103 25.134295801816332 14 23.35200122136623 19.86265115092741 25.65975260020277 31.125595027503593 15 24.948505164111506 27.519041432658103 22.43990897779208 25.092544425438312 16 25.202861452667186 26.123462997668785 24.231841660191066 24.441833889472964 17 23.842469641882545 26.295939421808477 25.51082909223218 24.350761844076796 18 24.069744321103624 26.063888869843055 26.34491396234867 23.52145284670465 19 25.487105742147754 25.281914762323115 25.4201866968229 23.81079279870623 20 25.65849738630567 25.27969911889521 25.215750913741687 23.846052581057435 21 25.982324961443844 24.683711520406195 25.019403780560385 24.31455973758958 22 25.43456280431281 25.164006662656398 25.22000113360235 24.181429399428445 23 24.75802245551613 25.127268189512016 25.22559049377361 24.889118861198252 24 24.539816447670947 25.325705279574933 25.624693172873602 24.509785099880517 25 24.933125502815766 25.01371315731734 25.415234403569077 24.637926936297813 26 24.595710834451374 25.59223442989022 25.5986798347965 24.2133749008619 27 24.7816769550335 25.504026359673503 25.225408487171237 24.488888198121764 28 24.82810070131074 25.416914653289556 25.194115243154886 24.560869402244816 29 24.60642950654214 25.250861192578018 25.241170490532365 24.901538810347475 30 24.784082192757666 25.471993081122196 25.25824656547381 24.485678160646323 31 24.90610526084818 25.14541342027358 25.190029420961107 24.758451897917126 32 24.79175113718072 25.50845726024354 25.114746574744462 24.585045027831274 33 24.63532136197889 25.462936509278844 25.25279860084814 24.648943527894126 34 24.87219243905828 25.296572051283928 25.437864315543884 24.393371194113904 35 24.949854912938623 25.10742110719621 25.630264777030348 24.31245920283482 36 24.522955986055532 25.37034852944 25.361434382277032 24.74526110222744 37 24.740531484770152 25.192432958729594 25.25556020286655 24.811475353633703 38 24.78572973032277 25.436734671487297 25.18631650789631 24.591219090293624 39 24.946951627014855 25.185200761007593 25.25587097611749 24.61197663586006 40 25.226692923139932 25.09056517698664 25.508044930384234 24.174696969489194 41 24.682672317799423 24.901857889126383 25.790027993585795 24.6254417994884 42 24.817363098889505 25.213811564245862 25.671740853527535 24.2970844833371 43 24.65456556717619 24.893128793973524 25.734979521685077 24.717326117165218 44 24.251470729399504 25.115441401661116 25.668033405098527 24.965054463840854 45 24.41507910859359 25.023483685295307 25.805724671102702 24.755712535008403 46 24.43177662709993 24.91511617701911 25.521553268827113 25.13155392705385 47 24.37407464799484 24.934119736835488 25.897651440040846 24.794154175128824 48 24.301520970598105 25.38394519861662 25.467686802743728 24.84684702804155 49 24.275212105449125 25.200152305448302 25.653274727123215 24.87136086197936 50 24.158001097966295 25.491696458487322 25.43350698753612 24.91679545601027 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 19.0 1 24.5 2 30.0 3 93.5 4 157.0 5 198.5 6 240.0 7 243.0 8 246.0 9 312.5 10 379.0 11 594.5 12 810.0 13 1405.0 14 2000.0 15 2667.0 16 3334.0 17 3305.0 18 3276.0 19 3422.5 20 3569.0 21 4165.5 22 4762.0 23 6246.0 24 7730.0 25 10355.0 26 12980.0 27 16916.5 28 20853.0 29 25886.5 30 30920.0 31 35474.5 32 40029.0 33 48659.0 34 57289.0 35 66194.0 36 75099.0 37 82007.0 38 88915.0 39 97266.5 40 105618.0 41 113574.0 42 121530.0 43 127306.5 44 133083.0 45 140807.5 46 148532.0 47 153536.5 48 158541.0 49 163965.5 50 169390.0 51 166130.5 52 162871.0 53 163533.0 54 164195.0 55 157784.0 56 151373.0 57 144313.0 58 137253.0 59 125708.0 60 114163.0 61 98388.5 62 82614.0 63 72289.0 64 61964.0 65 52056.5 66 42149.0 67 35144.5 68 28140.0 69 23644.5 70 19149.0 71 15335.0 72 11521.0 73 9873.0 74 8225.0 75 6725.5 76 5226.0 77 4241.5 78 3257.0 79 2982.0 80 2707.0 81 2381.0 82 2055.0 83 1428.0 84 801.0 85 593.0 86 385.0 87 269.5 88 154.0 89 110.0 90 66.0 91 52.5 92 39.0 93 31.5 94 24.0 95 28.5 96 33.0 97 24.5 98 16.0 99 11.5 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009690462847588217 2 2.742583824789118E-4 3 3.6567784330521577E-4 4 0.0 5 0.0 6 2.2854865206575983E-4 7 9.141946082630394E-5 8 0.0 9 8.684848778498875E-4 10 0.0010970335299156472 11 1.371291912394559E-4 12 1.371291912394559E-4 13 4.5709730413151967E-4 14 1.8283892165260788E-4 15 0.005485167649578237 16 8.227751474367355E-4 17 0.0 18 5.942264953709756E-4 19 0.0 20 4.5709730413151967E-4 21 0.0 22 9.141946082630394E-5 23 6.856459561972796E-4 24 1.8283892165260788E-4 25 0.001736969755699775 26 0.005165199536686173 27 0.006125103875362364 28 0.004570973041315197 29 0.002468325442310206 30 0.0036567784330521574 31 0.0074049763269306195 32 0.00324539085933379 33 0.004890941154207261 34 0.002468325442310206 35 0.00301684220726803 36 0.008410590396019962 37 0.0033368103201600933 38 0.008090622283127898 39 0.004205295198009981 40 0.003062551937681182 41 0.0033825200505732456 42 0.0020112281381786867 43 0.001736969755699775 44 0.001279872451568255 45 0.001325582181981407 46 0.0010056140690893433 47 0.0016912600252866228 48 0.001645550294873471 49 4.1138757371836777E-4 50 0.0016912600252866228 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 2187718.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.52751603330554 #Duplication Level Percentage of deduplicated Percentage of total 1 58.02883919750235 20.03591675785871 2 14.865735757739598 10.265538594444749 3 7.72936960858631 8.006277992634251 4 4.844531639829179 6.690785754722318 5 3.2719541197741924 5.648622416537178 6 2.30687502803698 4.77903987104274 7 1.7004514571875038 4.109865546632952 8 1.3014199868864051 3.5947839570627713 9 0.9686045485455501 3.0099158171855245 >10 4.799297826922045 27.217266800264444 >50 0.12534772279356926 2.923075762736297 >100 0.0561078966123516 3.404608561670159 >500 0.0013320087126179054 0.2676213507436674 >1k 1.332008712617885E-4 0.04668081646413795 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 4.570973041315197E-5 7 0.0 0.0 0.0 0.0 4.570973041315197E-5 8 0.0 0.0 0.0 0.0 4.570973041315197E-5 9 0.0 0.0 0.0 4.570973041315197E-5 4.570973041315197E-5 10 0.0 0.0 0.0 4.570973041315197E-5 4.570973041315197E-5 11 0.0 0.0 0.0 4.570973041315197E-5 4.570973041315197E-5 12 0.0 0.0 0.0 4.570973041315197E-5 4.570973041315197E-5 13 0.0 0.0 0.0 4.570973041315197E-5 1.371291912394559E-4 14 0.0 0.0 0.0 4.570973041315197E-5 1.371291912394559E-4 15 0.0 0.0 0.0 4.570973041315197E-5 1.371291912394559E-4 16 0.0 0.0 0.0 1.371291912394559E-4 1.371291912394559E-4 17 0.0 0.0 0.0 1.371291912394559E-4 1.371291912394559E-4 18 0.0 0.0 0.0 1.8283892165260788E-4 1.8283892165260788E-4 19 0.0 0.0 0.0 2.2854865206575983E-4 1.8283892165260788E-4 20 0.0 0.0 0.0 3.6567784330521577E-4 1.8283892165260788E-4 21 0.0 0.0 0.0 4.113875737183677E-4 1.8283892165260788E-4 22 0.0 0.0 0.0 5.485167649578236E-4 1.8283892165260788E-4 23 0.0 0.0 0.0 7.313556866104315E-4 1.8283892165260788E-4 24 0.0 0.0 0.0 0.0010056140690893433 1.8283892165260788E-4 25 0.0 0.0 0.0 0.0011884529907419512 1.8283892165260788E-4 26 0.0 0.0 0.0 0.001599840564460319 2.2854865206575983E-4 27 0.0 0.0 0.0 0.00255974490313651 2.742583824789118E-4 28 0.0 0.0 0.0 0.005576587110404541 2.742583824789118E-4 29 0.0 0.0 0.0 0.010604657455851256 2.742583824789118E-4 30 0.0 0.0 0.0 0.021255024642115667 2.742583824789118E-4 31 0.0 0.0 0.0 0.055080225147848126 2.742583824789118E-4 32 0.0 0.0 0.0 0.09407062519026675 2.742583824789118E-4 33 0.0 0.0 0.0 0.13315244469351167 2.742583824789118E-4 34 0.0 0.0 0.0 0.1764395593947666 3.1996811289206376E-4 35 0.0 0.0 0.0 0.22800013530080201 3.1996811289206376E-4 36 0.0 0.0 0.0 0.3011357039618452 3.1996811289206376E-4 37 0.0 0.0 0.0 0.4197524543839745 3.1996811289206376E-4 38 0.0 0.0 0.0 0.579919349751659 3.1996811289206376E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 2190 0.0 29.832159 1 GGTATCA 780 0.0 23.407545 1 TATCAAC 3335 0.0 19.39117 2 ATCAACG 3350 0.0 19.173021 3 TCAACGC 3380 0.0 19.003283 4 CAACGCA 3460 0.0 18.5639 5 TAGACGC 85 1.433025E-4 18.115133 4 AACGCAG 3585 0.0 18.039337 6 CGCGGAT 90 2.2179789E-4 17.10952 42 ACGATAT 105 3.7773883E-5 16.761496 15 CGTGATT 330 0.0 16.667784 28 TAGGACG 665 0.0 16.53906 4 TCCCGAT 80 0.0019911928 16.497335 17 GTATAAT 230 1.8189894E-12 16.258987 1 GTATAAG 285 0.0 16.208647 1 GTAGGAC 950 0.0 15.744824 3 TAGGACC 875 0.0 15.58641 4 ACGCAGA 4160 0.0 15.493044 7 GTCTTAT 245 5.456968E-12 15.263538 1 GTATTAC 235 5.0931703E-11 14.976988 1 >>END_MODULE