##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063870_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5215525 Sequences flagged as poor quality 0 Sequence length 25 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.226736522210132 32.0 32.0 32.0 32.0 32.0 2 30.75187119225773 32.0 32.0 32.0 32.0 32.0 3 30.784512009816844 32.0 32.0 32.0 32.0 32.0 4 30.819151475642432 32.0 32.0 32.0 32.0 32.0 5 30.683619578086578 32.0 32.0 32.0 32.0 32.0 6 34.36091706971015 36.0 36.0 36.0 32.0 36.0 7 34.29524295253115 36.0 36.0 36.0 32.0 36.0 8 34.24584945906692 36.0 36.0 36.0 32.0 36.0 9 34.420343877174396 36.0 36.0 36.0 32.0 36.0 10 34.05547035053998 36.0 36.0 36.0 32.0 36.0 11 34.395929844071304 36.0 36.0 36.0 32.0 36.0 12 34.17772707445559 36.0 36.0 36.0 32.0 36.0 13 34.28623407998236 36.0 36.0 36.0 32.0 36.0 14 34.16808988548612 36.0 36.0 36.0 32.0 36.0 15 34.08975625656094 36.0 36.0 36.0 32.0 36.0 16 34.09126751381692 36.0 36.0 36.0 32.0 36.0 17 34.00490803897978 36.0 36.0 36.0 32.0 36.0 18 34.005540573576006 36.0 36.0 36.0 32.0 36.0 19 34.025527823181754 36.0 36.0 36.0 32.0 36.0 20 34.003748424175896 36.0 36.0 36.0 32.0 36.0 21 33.99081185499063 36.0 36.0 36.0 32.0 36.0 22 33.967039751511116 36.0 36.0 36.0 32.0 36.0 23 33.901037575316 36.0 36.0 36.0 32.0 36.0 24 33.888461276669176 36.0 36.0 36.0 32.0 36.0 25 33.467158914970206 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 3 17.0 4 45.0 5 79.0 6 207.0 7 84.0 8 329.0 9 338.0 10 428.0 11 163.0 12 315.0 13 275.0 14 429.0 15 766.0 16 1332.0 17 1922.0 18 2651.0 19 3671.0 20 5640.0 21 8489.0 22 13440.0 23 20866.0 24 31129.0 25 44663.0 26 63300.0 27 83554.0 28 112531.0 29 151518.0 30 198516.0 31 267282.0 32 375148.0 33 522959.0 34 1088245.0 35 2215194.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.5138357009671 17.714316075415184 12.328248967618842 25.443599255998876 2 16.534473280381835 19.7219940968854 37.857111492857534 25.88642112987523 3 18.48988981549762 23.95967430514891 28.637981038586624 28.91245484076685 4 12.606774798530248 15.97313979505298 35.680408735913325 35.73967667050346 5 14.94159090643251 36.44590910075825 33.05871666627996 15.553783326529278 6 33.896275012181654 35.37203376000924 17.212902716091808 13.518788511717302 7 30.619414377440414 30.56117047799504 20.41365250811234 18.405762636452206 8 28.35584176004766 32.632554720977154 19.176792118115486 19.8348114008597 9 27.370443748911367 14.825622661112291 18.698229869164244 39.1057037208121 10 16.244221109769466 26.495413146766644 30.803954949883988 26.456410793579906 11 36.5943313481695 21.320348811779304 22.87722908882745 19.20809075122375 12 25.19466775539147 23.501759521002015 28.462492138657392 22.841080584949122 13 29.066918540757246 19.671178451488526 25.60088700814715 25.661015999607073 14 23.88401940850827 19.947597257912168 25.052739468846635 31.115643864732927 15 25.20721613250782 27.42596929801674 22.1820831427633 25.184731426712137 16 25.831398865969472 25.97140192427939 23.670781570862324 24.52641763888881 17 23.84351967160496 26.050432259793688 25.209549256857727 24.896498811743623 18 24.654804756660837 25.1749266186073 26.213616078838392 23.956652545893473 19 25.491192337175043 24.881117418555142 25.419660357410457 24.208029886859357 20 25.80354297098144 24.4310873742106 24.91909546571941 24.84627418908855 21 26.942131475154728 24.082850511987306 24.51368161709893 24.46133639575904 22 25.85361875558865 24.19462108507021 24.981233665805743 24.9705264935354 23 24.471696795294452 24.162075923988507 25.436520333465612 25.929706947251425 24 24.707830970435214 25.029405906663253 25.168673815675906 25.09408930722562 25 24.868469149565914 24.47015886934989 25.360303098043467 25.301068883040728 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 354.0 1 354.0 2 949.0 3 1544.0 4 1544.0 5 1544.0 6 3884.0 7 6224.0 8 6224.0 9 6224.0 10 6619.0 11 7014.0 12 7014.0 13 7014.0 14 9471.0 15 11928.0 16 11928.0 17 11928.0 18 21734.0 19 31540.0 20 31540.0 21 31540.0 22 52720.5 23 73901.0 24 73901.0 25 73901.0 26 113720.5 27 153540.0 28 153540.0 29 153540.0 30 197264.0 31 240988.0 32 240988.0 33 240988.0 34 291253.0 35 341518.0 36 341518.0 37 341518.0 38 387705.5 39 433893.0 40 433893.0 41 433893.0 42 491282.5 43 548672.0 44 548672.0 45 548672.0 46 610601.5 47 672531.0 48 672531.0 49 672531.0 50 687411.0 51 702291.0 52 702291.0 53 702291.0 54 652072.0 55 601853.0 56 601853.0 57 601853.0 58 550630.0 59 499407.0 60 499407.0 61 499407.0 62 438363.5 63 377320.0 64 377320.0 65 377320.0 66 309883.0 67 242446.0 68 242446.0 69 242446.0 70 184550.5 71 126655.0 72 126655.0 73 126655.0 74 97121.0 75 67587.0 76 67587.0 77 67587.0 78 54647.0 79 41707.0 80 41707.0 81 41707.0 82 28681.0 83 15655.0 84 15655.0 85 15655.0 86 11941.5 87 8228.0 88 8228.0 89 8228.0 90 6135.0 91 4042.0 92 4042.0 93 4042.0 94 2906.0 95 1770.0 96 1770.0 97 1770.0 98 2343.5 99 2917.0 100 2917.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.040111014710887204 2 0.005982139861279545 3 0.0017447907928732009 4 0.004333216694388389 5 0.009548415547811582 6 0.0137282440406287 7 0.023871038869528953 8 0.03543267456296346 9 0.049410174431145475 10 0.057884872567958164 11 0.05477876148613994 12 0.06348354192530953 13 0.06513246509220069 14 0.06871791430392914 15 0.05930371343249242 16 0.06703064408664516 17 0.06262073329147114 18 0.07772947114624128 19 0.07420154251010205 20 0.07930170021234678 21 0.07611889502974292 22 0.07794037992340176 23 0.08269541417211115 24 0.07644484495808188 25 0.07688583603759928 >>END_MODULE >>Sequence Length Distribution pass #Length Count 25 5215525.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.47820204717623 #Duplication Level Percentage of deduplicated Percentage of total 1 70.54171299386233 27.14318285331751 2 14.882891274939114 11.453337950465269 3 5.672466607219232 6.547989486553256 4 2.6480928844395923 4.075754121886253 5 1.4580006286738634 2.805062138751144 6 0.9578982300277822 2.2114920981384896 7 0.6506592071346207 1.7525337505186998 8 0.4624270441707352 1.4234688990144029 9 0.343154376291278 1.1883567081877682 >10 2.0666519181386147 14.926917350548036 >50 0.17730836646322382 4.704727539157565 >100 0.11125948322463813 8.405582128132966 >500 0.015465189536635008 4.239132055289702 >1k 0.01181159928037103 8.509865530808254 >5k 1.5014744847927094E-4 0.3694264607863134 >10k+ 5.004914949309032E-5 0.2431709284443924 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTT 12627 0.24210410265505392 No Hit TATCAACGCAGAGTACTTTTTTTTT 8095 0.15520968646492922 No Hit GTTCAAAGCAGGCCCGAGCCGCCTG 5766 0.11055454628249313 No Hit CTATTGGAGCTGGAATTACCGCGGC 5322 0.10204150109528762 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.9173525196408797E-5 1.9173525196408797E-5 2 0.0 0.0 0.0 1.9173525196408797E-5 1.9173525196408797E-5 3 0.0 0.0 0.0 3.8347050392817595E-5 1.9173525196408797E-5 4 0.0 0.0 0.0 5.75205755892264E-5 1.9173525196408797E-5 5 0.0 0.0 0.0 7.669410078563519E-5 1.9173525196408797E-5 6 0.0 0.0 0.0 7.669410078563519E-5 1.9173525196408797E-5 7 0.0 0.0 0.0 9.586762598204399E-5 1.9173525196408797E-5 8 0.0 0.0 0.0 9.586762598204399E-5 1.9173525196408797E-5 9 0.0 0.0 0.0 1.150411511784528E-4 1.9173525196408797E-5 10 0.0 0.0 0.0 1.9173525196408797E-4 1.9173525196408797E-5 11 0.0 0.0 0.0 1.9173525196408797E-4 1.9173525196408797E-5 12 0.0 0.0 0.0 1.9173525196408797E-4 3.8347050392817595E-5 13 0.0 0.0 0.0 1.9173525196408797E-4 3.8347050392817595E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATT 260 0.0 12.419183 2 AACCGCG 455 0.0 12.110276 7 GTATCAA 8760 0.0 11.918529 1 CCGTCGT 710 0.0 11.9092865 9 CGTCGTA 725 0.0 11.793592 10 GCGTAAC 385 0.0 11.597882 11 TCGCGTA 415 0.0 11.217655 9 CGGTCCA 775 0.0 11.155301 10 GGTATCA 3410 0.0 11.032397 1 CGCGTAA 405 0.0 11.025147 10 ACCGTCG 765 0.0 10.804576 8 GGATACG 80 3.7734467E-4 10.687634 1 ACGCGCG 250 0.0 10.640747 13 AGGCCCG 1125 0.0 10.555993 10 GTCCTAA 615 0.0 10.504198 1 TCCAACG 375 0.0 10.387894 18 CGCATCG 745 0.0 10.329584 13 CGAGCCG 1095 0.0 10.325124 15 AAGACGG 920 0.0 10.324434 5 TTGCGCG 630 0.0 10.255179 18 >>END_MODULE