##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063870_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5215525 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.309313635731783 32.0 32.0 32.0 32.0 32.0 2 31.385406071296753 32.0 32.0 32.0 32.0 32.0 3 31.471478134991205 32.0 32.0 32.0 32.0 32.0 4 31.56281908340963 32.0 32.0 32.0 32.0 32.0 5 31.501950235115352 32.0 32.0 32.0 32.0 32.0 6 35.09380743069969 36.0 36.0 36.0 36.0 36.0 7 35.10637816902421 36.0 36.0 36.0 36.0 36.0 8 35.05602734144693 36.0 36.0 36.0 36.0 36.0 9 35.17601334477354 36.0 36.0 36.0 36.0 36.0 10 35.02521318563328 36.0 36.0 36.0 36.0 36.0 11 35.176598137292025 36.0 36.0 36.0 36.0 36.0 12 35.07678498329506 36.0 36.0 36.0 36.0 36.0 13 35.122118099328446 36.0 36.0 36.0 36.0 36.0 14 35.06431375556632 36.0 36.0 36.0 36.0 36.0 15 35.03493032820282 36.0 36.0 36.0 36.0 36.0 16 35.050625775928594 36.0 36.0 36.0 36.0 36.0 17 35.00997962812948 36.0 36.0 36.0 36.0 36.0 18 35.01156853816251 36.0 36.0 36.0 36.0 36.0 19 35.00781397845854 36.0 36.0 36.0 36.0 36.0 20 35.00046476625076 36.0 36.0 36.0 36.0 36.0 21 34.99699685074849 36.0 36.0 36.0 36.0 36.0 22 34.981370811183915 36.0 36.0 36.0 36.0 36.0 23 34.931249874173744 36.0 36.0 36.0 32.0 36.0 24 34.89846237914687 36.0 36.0 36.0 32.0 36.0 25 34.875260112836195 36.0 36.0 36.0 32.0 36.0 26 34.816327215381 36.0 36.0 36.0 32.0 36.0 27 34.813418399873456 36.0 36.0 36.0 32.0 36.0 28 34.788611309503835 36.0 36.0 36.0 32.0 36.0 29 34.7605855594595 36.0 36.0 36.0 32.0 36.0 30 34.74092751928138 36.0 36.0 36.0 32.0 36.0 31 34.73950676106432 36.0 36.0 36.0 32.0 36.0 32 34.69795178817089 36.0 36.0 36.0 32.0 36.0 33 34.67670828919428 36.0 36.0 36.0 32.0 36.0 34 34.66925918292022 36.0 36.0 36.0 32.0 36.0 35 34.63671001481155 36.0 36.0 36.0 32.0 36.0 36 34.61024920789374 36.0 36.0 36.0 32.0 36.0 37 34.60119489409024 36.0 36.0 36.0 32.0 36.0 38 34.55773426452754 36.0 36.0 36.0 32.0 36.0 39 34.56222949750984 36.0 36.0 36.0 32.0 36.0 40 34.54128453032053 36.0 36.0 36.0 32.0 36.0 41 34.5300106892403 36.0 36.0 36.0 32.0 36.0 42 34.45858547317864 36.0 36.0 36.0 32.0 36.0 43 34.45232301637898 36.0 36.0 36.0 32.0 36.0 44 34.391041170351976 36.0 36.0 36.0 32.0 36.0 45 34.36163799425753 36.0 36.0 36.0 32.0 36.0 46 34.34296758236228 36.0 36.0 36.0 32.0 36.0 47 34.30946031319954 36.0 36.0 36.0 32.0 36.0 48 34.265297932614644 36.0 36.0 36.0 32.0 36.0 49 34.24889919998466 36.0 36.0 36.0 32.0 36.0 50 33.637422311272594 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 16 1.0 17 4.0 18 8.0 19 15.0 20 67.0 21 191.0 22 559.0 23 1512.0 24 3998.0 25 9063.0 26 18623.0 27 34077.0 28 57127.0 29 88464.0 30 128330.0 31 184753.0 32 269841.0 33 439959.0 34 919472.0 35 3059461.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.53336703081939 18.670120275480784 12.92167558831899 25.874837105380834 2 15.77236174535802 20.426965529499263 37.389778128782595 26.41089459636012 3 17.68142696166677 24.543797422337757 28.979574541352786 28.795201074642684 4 12.25109648597217 16.615240076502367 35.76861389792974 35.36504953959573 5 14.47025946572972 36.88317091759698 32.9012132048068 15.745356411866496 6 33.930954773541764 35.69454103137393 16.971363677063923 13.40314051802039 7 30.49076765647472 30.695291728173764 20.462952612806042 18.350988002545478 8 28.27283093181643 32.891965005235335 19.020777015075957 19.814427047872286 9 27.36174413862486 14.668992573421658 18.607573602850145 39.36168968510334 10 16.155860570509113 26.67906820500962 30.847791249207646 26.317279975273618 11 36.87062136265965 21.20146769613237 22.76967152466647 19.158239416541512 12 25.139247913630054 23.50307294500757 28.426764129660754 22.930915011701618 13 29.118747793835258 19.64772690014896 25.650738309028533 25.58278699698725 14 23.912599985351395 19.87065896093846 25.024225800179998 31.19251525353014 15 25.223588487122345 27.504964744894465 22.124134249539765 25.147312518443428 16 25.899732604428266 26.006625642748322 23.599528635254877 24.494113117568535 17 23.9017402661746 26.174244428747716 25.081679232997487 24.842336072080197 18 24.702009064883576 25.129445609452265 26.183781416624374 23.984763909039785 19 25.58979201518543 24.844459570225432 25.341782466769885 24.223965947819252 20 25.91018790376128 24.37763745643026 24.902075337518685 24.810099302289775 21 27.02916772520504 24.037503415284174 24.46488129191213 24.46844756759866 22 25.86811690431986 24.112450683183035 25.0590881472254 24.9603442652717 23 24.494423041267368 24.05269930247991 25.486949707572286 25.965927948680438 24 24.814935963855376 24.975572774342286 25.142882013815765 25.066609247986577 25 24.956695804564532 24.37181593847487 25.427318552832652 25.244169704127945 26 24.583254477796103 25.241460928016064 25.847800088701696 24.32748450548614 27 25.067116120811896 24.85193803131798 25.065582147619992 25.01536370025013 28 24.48612108446614 24.79722584671787 25.69027387765002 25.026379191165965 29 24.55274189518749 24.540892347627377 25.529792696191983 25.376573060993152 30 24.464424453782737 24.896113836839284 25.7249789274837 24.91448278189428 31 25.3033822225793 24.612410718754177 24.76933900479011 25.31486805387641 32 24.828468216959134 24.874735396981222 24.705811295864525 25.59098509019512 33 24.48905085696032 24.62049119378505 25.23117584550363 25.659282103751007 34 25.149389451805664 24.648775404355757 25.548918154808987 24.652916989029595 35 25.615563494461767 24.585322959920113 25.297236023272685 24.50187752234543 36 24.60961438898583 25.100439109508926 24.955686372265156 25.334260129240093 37 25.493800470345512 24.790678990626645 24.963861243280608 24.751659295747235 38 24.808192038828697 24.68957521909405 25.318746749830108 25.183485992247146 39 25.307499796751397 24.57536381499929 24.797767640061295 25.31936874818802 40 25.584678567477354 24.9102511472303 25.139610924366686 24.365459360925662 41 24.58252002745746 25.008455824548353 25.800043717188142 24.608980430806046 42 25.825723219647557 25.236893309619074 24.91461870435178 24.02276476638159 43 24.887157106873307 24.378858377543438 25.409970439677444 25.324014075905815 44 24.608897077391127 24.933855091504213 24.946298905001935 25.510948926102728 45 24.684360284079577 25.10135290598684 25.085151013145584 25.129135796788 46 24.72928645439074 24.753234412352775 25.049985849805463 25.46749328345102 47 24.97055844804769 24.925480565507886 25.3836030017153 24.720357984729123 48 25.59941082326558 25.24026381036363 24.43037588777725 24.729949478593547 49 24.82118208778025 25.340192629624653 24.805766502585275 25.03285878000982 50 24.844400140275233 25.420111472408667 24.586858189525337 25.148630197790762 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 45.0 1 73.0 2 101.0 3 288.5 4 476.0 5 542.0 6 608.0 7 602.0 8 596.0 9 807.0 10 1018.0 11 1556.5 12 2095.0 13 4115.5 14 6136.0 15 8333.5 16 10531.0 17 11265.0 18 11999.0 19 12022.0 20 12045.0 21 13684.5 22 15324.0 23 17557.0 24 19790.0 25 24326.5 26 28863.0 27 38633.0 28 48403.0 29 58093.5 30 67784.0 31 76561.5 32 85339.0 33 99343.5 34 113348.0 35 132628.0 36 151908.0 37 177521.5 38 203135.0 39 221123.5 40 239112.0 41 258193.5 42 277275.0 43 281770.0 44 286265.0 45 313067.0 46 339869.0 47 362483.0 48 385097.0 49 394281.5 50 403466.0 51 391240.0 52 379014.0 53 374812.5 54 370611.0 55 370158.5 56 369706.0 57 360795.0 58 351884.0 59 319728.5 60 287573.0 61 253863.0 62 220153.0 63 191549.5 64 162946.0 65 138896.5 66 114847.0 67 98452.5 68 82058.0 69 74338.5 70 66619.0 71 51099.0 72 35579.0 73 30533.5 74 25488.0 75 19226.5 76 12965.0 77 11279.0 78 9593.0 79 8139.5 80 6686.0 81 5317.0 82 3948.0 83 3304.0 84 2660.0 85 1903.5 86 1147.0 87 802.5 88 458.0 89 363.0 90 268.0 91 232.0 92 196.0 93 177.0 94 158.0 95 151.0 96 144.0 97 131.0 98 118.0 99 98.0 100 78.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009529242022615174 2 4.2181755432099357E-4 3 4.601646047138112E-4 4 0.0 5 0.0 6 3.0677640314254076E-4 7 3.8347050392817595E-5 8 3.8347050392817595E-5 9 0.0013037997133557983 10 8.244615834455784E-4 11 7.669410078563519E-5 12 1.342146763748616E-4 13 4.985116551066288E-4 14 2.1090877716049678E-4 15 0.004831728349495017 16 5.943792810886728E-4 17 1.9173525196408797E-5 18 2.684293527497232E-4 19 0.0 20 6.902469070707168E-4 21 0.0 22 2.300823023569056E-4 23 9.203292094276224E-4 24 6.327263314814904E-4 25 0.0018214848936588361 26 0.0055986693573513695 27 0.005943792810886727 28 0.004601646047138112 29 0.0026075994267115966 30 0.0038538785644781685 31 0.007746104179349154 32 0.003163631657407452 33 0.004429084320370432 34 0.002492558275533144 35 0.0027034670526936404 36 0.008148748208473739 37 0.004026440291245848 38 0.007918665906116833 39 0.004544125471548885 40 0.0026459464771044143 41 0.003547102161335628 42 0.0018598319440516536 43 0.0016872702172839743 44 0.0015722290661055215 45 0.001629749641694748 46 9.39502734624031E-4 47 0.0020515671960157416 48 0.0021474348219977855 49 4.601646047138112E-4 50 0.001227105612570163 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5215525.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.87331414133622 #Duplication Level Percentage of deduplicated Percentage of total 1 72.04952563543576 30.16952420666859 2 14.400724124390814 12.060120902466712 3 5.34755922661782 6.7176008215670695 4 2.480013980915063 4.15385617991049 5 1.4293966811540428 2.9926788131273323 6 0.8727110453731028 2.192598225451312 7 0.5721834038256798 1.6771450790396214 8 0.41587838033778923 1.3931364851579484 9 0.318376512794554 1.199833176192256 >10 1.8489725454555035 14.473537519091312 >50 0.14948135154092068 4.333438467452614 >100 0.09271024382335288 7.538525307537883 >500 0.013351214964617199 3.895392096796662 >1k 0.008977537411203907 6.898098853799805 >5k 1.381159601723046E-4 0.30451386574012246 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 5352 0.10261670685117988 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 5315 0.10190728641891275 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.342146763748616E-4 2 0.0 0.0 0.0 0.0 1.342146763748616E-4 3 0.0 0.0 0.0 0.0 1.342146763748616E-4 4 0.0 0.0 0.0 1.9173525196408797E-5 1.342146763748616E-4 5 0.0 0.0 0.0 3.8347050392817595E-5 1.342146763748616E-4 6 0.0 0.0 0.0 3.8347050392817595E-5 1.342146763748616E-4 7 0.0 0.0 0.0 3.8347050392817595E-5 1.342146763748616E-4 8 0.0 0.0 0.0 3.8347050392817595E-5 1.342146763748616E-4 9 0.0 0.0 0.0 5.75205755892264E-5 1.342146763748616E-4 10 0.0 0.0 0.0 1.342146763748616E-4 1.342146763748616E-4 11 0.0 0.0 0.0 1.5338820157127038E-4 1.342146763748616E-4 12 0.0 0.0 0.0 1.5338820157127038E-4 2.492558275533144E-4 13 0.0 0.0 0.0 1.5338820157127038E-4 2.492558275533144E-4 14 0.0 0.0 0.0 1.725617267676792E-4 2.492558275533144E-4 15 0.0 0.0 0.0 1.725617267676792E-4 2.684293527497232E-4 16 0.0 0.0 0.0 1.725617267676792E-4 2.684293527497232E-4 17 0.0 0.0 0.0 1.725617267676792E-4 2.684293527497232E-4 18 0.0 0.0 0.0 1.9173525196408797E-4 2.684293527497232E-4 19 0.0 0.0 0.0 2.492558275533144E-4 2.87602877946132E-4 20 0.0 0.0 0.0 2.492558275533144E-4 3.2594992833894957E-4 21 0.0 0.0 0.0 3.451234535353584E-4 3.451234535353584E-4 22 0.0 0.0 0.0 4.7933812991021995E-4 3.451234535353584E-4 23 0.0 0.0 0.0 8.436351086419871E-4 3.451234535353584E-4 24 0.0 0.0 0.0 0.0015338820157127038 3.451234535353584E-4 25 0.0 0.0 0.0 0.001802311368462427 3.451234535353584E-4 26 0.0 0.0 0.0 0.002281649498372647 3.8347050392817595E-4 27 0.0 0.0 0.0 0.003144458132211043 3.8347050392817595E-4 28 0.0 0.0 0.0 0.004275696118799162 4.0264402912458476E-4 29 0.0 0.0 0.0 0.006902469070707167 4.0264402912458476E-4 30 0.0 0.0 0.0 0.013766591091021518 4.0264402912458476E-4 31 0.0 0.0 0.0 0.032959289812626726 4.0264402912458476E-4 32 0.0 0.0 0.0 0.054567852708979445 4.0264402912458476E-4 33 0.0 0.0 0.0 0.0771159183399562 4.0264402912458476E-4 34 0.0 0.0 0.0 0.10282761562834039 4.0264402912458476E-4 35 0.0 0.0 0.0 0.1325274061575776 4.0264402912458476E-4 36 0.0 0.0 0.0 0.17622387008019327 4.0264402912458476E-4 37 0.0 0.0 0.0 0.23765584480948707 4.0264402912458476E-4 38 0.0 0.0 0.0 0.3243010051720584 4.0264402912458476E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 9355 0.0 23.001453 1 GGTATCA 4690 0.0 18.108177 1 GATATAC 1325 0.0 17.767574 1 TAGGACG 835 0.0 17.388058 4 AACGCAG 13090 0.0 16.301588 6 GTATTAG 1500 0.0 15.548012 1 ACCGTCG 1450 0.0 15.474976 8 CGTCGTA 1430 0.0 15.230627 10 ATACCGT 1615 0.0 15.119877 6 TATCAAC 14330 0.0 15.059704 2 TCAACGC 14115 0.0 15.024145 4 CGACCCG 1475 0.0 14.914256 5 CAACGCA 14355 0.0 14.788283 5 AATAGCG 970 0.0 14.741281 5 TACCGTC 1600 0.0 14.711657 7 ATAGCGT 990 0.0 14.665826 6 CGCAATA 1460 0.0 14.617842 36 ATCAACG 14515 0.0 14.594958 3 TTAGGAC 1000 0.0 14.519029 3 CCGTCGT 1485 0.0 14.518521 9 >>END_MODULE