##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063867_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 316952 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.375179837956537 32.0 32.0 32.0 32.0 32.0 2 31.484562331204724 32.0 32.0 32.0 32.0 32.0 3 31.512411974052853 32.0 32.0 32.0 32.0 32.0 4 31.58026136449683 32.0 32.0 32.0 32.0 32.0 5 31.55699285696257 32.0 32.0 32.0 32.0 32.0 6 35.14202150483354 36.0 36.0 36.0 36.0 36.0 7 35.14215401701204 36.0 36.0 36.0 36.0 36.0 8 35.11549382871854 36.0 36.0 36.0 36.0 36.0 9 35.19452156793458 36.0 36.0 36.0 36.0 36.0 10 35.07380612837275 36.0 36.0 36.0 36.0 36.0 11 35.18039009061309 36.0 36.0 36.0 36.0 36.0 12 35.12743885509478 36.0 36.0 36.0 36.0 36.0 13 35.12921199424518 36.0 36.0 36.0 36.0 36.0 14 35.087035260859686 36.0 36.0 36.0 36.0 36.0 15 35.08067467629168 36.0 36.0 36.0 36.0 36.0 16 35.093275953456676 36.0 36.0 36.0 36.0 36.0 17 35.061864257048384 36.0 36.0 36.0 36.0 36.0 18 35.0514746712436 36.0 36.0 36.0 36.0 36.0 19 35.03259168580731 36.0 36.0 36.0 36.0 36.0 20 35.045221358439136 36.0 36.0 36.0 36.0 36.0 21 35.043836290668615 36.0 36.0 36.0 36.0 36.0 22 35.0154250485878 36.0 36.0 36.0 36.0 36.0 23 34.96783109114314 36.0 36.0 36.0 36.0 36.0 24 34.94330056286125 36.0 36.0 36.0 36.0 36.0 25 34.92084921376107 36.0 36.0 36.0 36.0 36.0 26 34.8724917337641 36.0 36.0 36.0 32.0 36.0 27 34.84799906610465 36.0 36.0 36.0 32.0 36.0 28 34.83919647138999 36.0 36.0 36.0 32.0 36.0 29 34.81029935132133 36.0 36.0 36.0 32.0 36.0 30 34.793315707110224 36.0 36.0 36.0 32.0 36.0 31 34.792937100885936 36.0 36.0 36.0 32.0 36.0 32 34.760783967288425 36.0 36.0 36.0 32.0 36.0 33 34.74647580706227 36.0 36.0 36.0 32.0 36.0 34 34.71620939448245 36.0 36.0 36.0 32.0 36.0 35 34.7132373356218 36.0 36.0 36.0 32.0 36.0 36 34.68484817890406 36.0 36.0 36.0 32.0 36.0 37 34.6672272142154 36.0 36.0 36.0 32.0 36.0 38 34.63835217950983 36.0 36.0 36.0 32.0 36.0 39 34.64036825765415 36.0 36.0 36.0 32.0 36.0 40 34.612483909235465 36.0 36.0 36.0 32.0 36.0 41 34.6134083394331 36.0 36.0 36.0 32.0 36.0 42 34.564571291552035 36.0 36.0 36.0 32.0 36.0 43 34.56493412251697 36.0 36.0 36.0 32.0 36.0 44 34.50606085464045 36.0 36.0 36.0 32.0 36.0 45 34.491427724071784 36.0 36.0 36.0 32.0 36.0 46 34.46032837779853 36.0 36.0 36.0 32.0 36.0 47 34.44911216840405 36.0 36.0 36.0 32.0 36.0 48 34.423120851106795 36.0 36.0 36.0 32.0 36.0 49 34.38570824604356 36.0 36.0 36.0 32.0 36.0 50 33.81456498144829 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 0.0 19 0.0 20 1.0 21 16.0 22 39.0 23 111.0 24 260.0 25 585.0 26 1187.0 27 2189.0 28 3539.0 29 5391.0 30 7577.0 31 10691.0 32 14910.0 33 23449.0 34 48653.0 35 198353.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.574151205351505 17.888110564180234 12.899154360721948 26.638583869746306 2 15.738710400030289 20.80605519465154 36.870052468678125 26.58518193664005 3 18.395646000946524 23.795551348793182 28.738917810380187 29.069884839880107 4 12.846109190035085 17.537355814129583 34.640260985890606 34.976274009944724 5 14.65300739544158 36.79642343320124 33.2757010525253 15.274868118831876 6 33.800386178348774 34.92579318003988 17.552500063101036 13.72132057851031 7 30.437731896312375 30.657954516772257 20.243443802216106 18.660869784699262 8 28.484123778994924 32.82200459375552 19.22877912112875 19.4650925061208 9 28.12007016923912 14.953241541199185 17.903883286848316 39.022805002713376 10 15.77114082525099 27.642563717478687 32.65982217791043 23.926473279359893 11 36.44873671723163 21.526603397359853 22.62613897372473 19.39852091168379 12 25.29831203659883 23.693327023189777 28.510175106483672 22.498185833727717 13 29.998643323415923 20.68900240100205 24.57666957984042 24.735684695741615 14 24.252329224391154 19.80937116462797 25.377424270628584 30.560875340352293 15 25.01482949238963 26.97642426231163 22.671454173713304 25.33729207158543 16 25.736317199297048 26.21052598367561 23.576663753474534 24.476493063552812 17 23.918448219288724 26.096065019308917 25.02807996163457 24.95740679976779 18 24.275437766209183 26.18141662722827 25.639375295787982 23.90377031077457 19 25.863537696559728 25.44517781872334 25.24041495242182 23.45086953229511 20 25.96277015302098 24.79034548035968 24.916863858652786 24.33002050796656 21 26.645675054897904 24.60214795931245 24.642532623236328 24.109644362553322 22 26.26202074762109 24.963716903505894 24.313460713294127 24.46080163557889 23 25.402194043836708 24.94281414360039 24.9790975835229 24.675894229040004 24 25.28671805243115 25.38452558613531 24.63866426459777 24.69009209683577 25 24.958983808069462 24.929325946211996 24.90850234107803 25.20318790464051 26 24.954959787214577 25.297927992452806 25.120606804463954 24.626505415868667 27 25.107039524955905 25.369550607530154 24.74040746011062 24.783002407403316 28 25.59158715735272 24.63779090312484 24.762734110757737 25.0078878287647 29 24.99313765392952 25.494798814943824 24.615787497594237 24.89627603353242 30 25.082191694379414 25.309678111452566 24.40635826113295 25.201771933035065 31 24.854460834582316 25.049144119271123 25.184507375562042 24.911887670584523 32 25.183864708387894 25.09962296297465 24.87371625991891 24.84279606871855 33 24.816207790896527 25.126998050067208 24.947465402891453 25.109328756144812 34 25.144818708431664 24.906293776897158 25.135668942539468 24.813218572131706 35 25.19861427498691 25.04937749648205 25.124153641314294 24.62785458721675 36 24.894927490502454 24.80342290265174 25.279877825598568 25.02177178124724 37 25.083531843064254 25.05229613970878 24.907160548360125 24.95701146886684 38 25.17851226630906 24.945018537508876 24.908416817859113 24.968052378322948 39 25.07485573115671 24.92940370981533 24.794994683586637 25.200745875441328 40 25.388236481924366 24.794759990660868 25.106169505215398 24.710834022199364 41 25.542998132162147 24.208693018325004 25.367257307284568 24.88105154222828 42 24.86085870059064 24.65135796860013 25.449921752738653 25.037861578070576 43 24.88294462113181 24.220051491746176 25.682454944722092 25.214548942399915 44 24.491160982751058 24.446043029276186 25.602387780922363 25.46040820705039 45 24.54945290710148 24.757373449272436 25.36630614485657 25.326867498769513 46 24.841220511817358 24.300755011058563 25.118867704267878 25.7391567728562 47 24.46481250690183 24.640552777295746 26.045843916136867 24.848790799665558 48 24.57556262994993 24.561049253980922 25.644188812711192 25.219199303357954 49 24.35518423983518 24.685834718931318 25.705235194083624 25.253745847149872 50 24.01654550961684 25.113269221061135 25.5653995658539 25.30478570346812 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2.0 1 2.5 2 3.0 3 12.0 4 21.0 5 21.5 6 22.0 7 17.0 8 12.0 9 22.0 10 32.0 11 56.0 12 80.0 13 146.0 14 212.0 15 273.0 16 334.0 17 331.0 18 328.0 19 314.5 20 301.0 21 386.0 22 471.0 23 659.5 24 848.0 25 1029.5 26 1211.0 27 1628.5 28 2046.0 29 2580.0 30 3114.0 31 3881.0 32 4648.0 33 5768.0 34 6888.0 35 8150.0 36 9412.0 37 10756.5 38 12101.0 39 13038.0 40 13975.0 41 15112.0 42 16249.0 43 17363.5 44 18478.0 45 20252.0 46 22026.0 47 23176.0 48 24326.0 49 24858.0 50 25390.0 51 26431.5 52 27473.0 53 27521.5 54 27570.0 55 26422.0 56 25274.0 57 23367.0 58 21460.0 59 19812.5 60 18165.0 61 14950.5 62 11736.0 63 9893.0 64 8050.0 65 6841.5 66 5633.0 67 4798.0 68 3963.0 69 3068.0 70 2173.0 71 1658.0 72 1143.0 73 959.0 74 775.0 75 599.5 76 424.0 77 346.0 78 268.0 79 220.0 80 172.0 81 126.0 82 80.0 83 55.0 84 30.0 85 22.5 86 15.0 87 9.0 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 2.0 94 2.0 95 3.0 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.010096165980968727 2 3.155051869052727E-4 3 6.310103738105454E-4 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0012620207476210909 10 0.0018930311214316361 11 0.0 12 6.310103738105454E-4 13 3.155051869052727E-4 14 3.155051869052727E-4 15 0.0050480829904843635 16 9.465155607158181E-4 17 0.0 18 6.310103738105454E-4 19 0.0 20 6.310103738105454E-4 21 0.0 22 0.0 23 9.465155607158181E-4 24 9.465155607158181E-4 25 0.0012620207476210909 26 0.004101567429768546 27 0.004101567429768546 28 0.0025240414952421818 29 0.0015775259345263636 30 0.003155051869052727 31 0.008518640046442363 32 0.002208536308336909 33 0.005679093364294909 34 0.0012620207476210909 35 0.0018930311214316361 36 0.008834145233347636 37 0.002208536308336909 38 0.008518640046442363 39 0.0028395466821474545 40 0.0018930311214316361 41 0.0025240414952421818 42 0.0025240414952421818 43 0.0025240414952421818 44 0.0015775259345263636 45 0.0012620207476210909 46 9.465155607158181E-4 47 0.002208536308336909 48 9.465155607158181E-4 49 3.155051869052727E-4 50 0.0025240414952421818 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 316952.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.11332544845644 #Duplication Level Percentage of deduplicated Percentage of total 1 60.91819927672765 26.263861511514836 2 15.541958571304837 13.401310359821853 3 7.808262448808881 10.099204804273763 4 4.678830158783724 8.068797094147834 5 2.983165613873715 6.430709498879092 6 1.9953321410851155 5.16152423858208 7 1.420431306151413 4.286766202549737 8 0.9848229756452248 3.39671947664879 9 0.7541531365982007 2.926264465451921 >10 2.8671693205150146 18.460583831367046 >50 0.04180735198243143 1.1810816817553356 >100 0.005867698523850025 0.3231768350077518 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 3.155051869052727E-4 0.0 22 0.0 0.0 0.0 3.155051869052727E-4 0.0 23 0.0 0.0 0.0 3.155051869052727E-4 0.0 24 0.0 0.0 0.0 6.310103738105454E-4 0.0 25 0.0 0.0 0.0 0.0015775259345263636 0.0 26 0.0 0.0 0.0 0.0015775259345263636 0.0 27 0.0 0.0 0.0 0.0018930311214316363 0.0 28 0.0 0.0 0.0 0.005679093364294909 0.0 29 0.0 0.0 0.0 0.011358186728589818 0.0 30 0.0 0.0 0.0 0.022716373457179636 0.0 31 0.0 0.0 0.0 0.05931497513819127 0.0 32 0.0 0.0 0.0 0.10443221686564527 0.0 33 0.0 0.0 0.0 0.15522855195739418 0.0 34 0.0 0.0 0.0 0.2035008455539009 0.0 35 0.0 0.0 0.0 0.2587142532623236 0.0 36 0.0 0.0 0.0 0.33727504480173653 0.0 37 0.0 0.0 0.0 0.4694717181150458 0.0 38 0.0 0.0 0.0 0.6707640273606098 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 395 0.0 33.415207 1 AAGAGCG 35 3.210995E-4 31.431162 9 GGTATCA 110 0.0 29.997744 1 TAAGGGT 45 4.0622755E-5 29.331123 4 CTTTACG 30 0.005740815 29.331123 2 TACACCG 30 0.005740815 29.331123 5 ATTAGAG 50 0.002577405 21.998344 3 TTTGGAC 80 3.6039783E-6 21.998344 3 TATCAAC 590 0.0 21.998343 2 TTAGGGT 60 2.8677675E-4 21.998343 4 ATCAACG 630 0.0 20.601624 3 TCAACGC 635 0.0 20.439405 4 CAACGCA 655 0.0 20.151155 5 CCTTTAC 55 0.0044783927 19.998495 1 TATTAGA 55 0.0044783927 19.998495 2 AACGCAG 685 0.0 19.268621 6 CCTTAGG 80 8.967123E-5 19.24855 2 GCGGTGC 60 0.0073968256 18.334845 13 GAGCGGT 60 0.0073968256 18.334845 11 GTAATAT 85 1.4274423E-4 18.116282 3 >>END_MODULE