##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063866_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5746460 Sequences flagged as poor quality 0 Sequence length 50 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.3514253992893 32.0 32.0 32.0 32.0 32.0 2 31.40482958203833 32.0 32.0 32.0 32.0 32.0 3 31.48659522558236 32.0 32.0 32.0 32.0 32.0 4 31.56889458901654 32.0 32.0 32.0 32.0 32.0 5 31.51519648618454 32.0 32.0 32.0 32.0 32.0 6 35.117063200648744 36.0 36.0 36.0 36.0 36.0 7 35.13263713660236 36.0 36.0 36.0 36.0 36.0 8 35.074951187339686 36.0 36.0 36.0 36.0 36.0 9 35.19284115786066 36.0 36.0 36.0 36.0 36.0 10 35.0406939228673 36.0 36.0 36.0 36.0 36.0 11 35.18765361631335 36.0 36.0 36.0 36.0 36.0 12 35.09037198553544 36.0 36.0 36.0 36.0 36.0 13 35.13810450259812 36.0 36.0 36.0 36.0 36.0 14 35.077768748064024 36.0 36.0 36.0 36.0 36.0 15 35.04721619919046 36.0 36.0 36.0 36.0 36.0 16 35.06451537120245 36.0 36.0 36.0 36.0 36.0 17 35.02927158633315 36.0 36.0 36.0 36.0 36.0 18 35.031206690727856 36.0 36.0 36.0 36.0 36.0 19 35.024550592886754 36.0 36.0 36.0 36.0 36.0 20 35.01392683495578 36.0 36.0 36.0 36.0 36.0 21 35.007476254946525 36.0 36.0 36.0 36.0 36.0 22 34.987032016232604 36.0 36.0 36.0 36.0 36.0 23 34.93545695958903 36.0 36.0 36.0 36.0 36.0 24 34.90816868124028 36.0 36.0 36.0 32.0 36.0 25 34.8790796420753 36.0 36.0 36.0 32.0 36.0 26 34.8160551017496 36.0 36.0 36.0 32.0 36.0 27 34.80705390797117 36.0 36.0 36.0 32.0 36.0 28 34.781061383878075 36.0 36.0 36.0 32.0 36.0 29 34.74695412480031 36.0 36.0 36.0 32.0 36.0 30 34.7248523438778 36.0 36.0 36.0 32.0 36.0 31 34.72269153531043 36.0 36.0 36.0 32.0 36.0 32 34.68368682632438 36.0 36.0 36.0 32.0 36.0 33 34.67480379224775 36.0 36.0 36.0 32.0 36.0 34 34.66629542361732 36.0 36.0 36.0 32.0 36.0 35 34.629876480476675 36.0 36.0 36.0 32.0 36.0 36 34.600514403650244 36.0 36.0 36.0 32.0 36.0 37 34.57781503743174 36.0 36.0 36.0 32.0 36.0 38 34.533368717436474 36.0 36.0 36.0 32.0 36.0 39 34.51128538265297 36.0 36.0 36.0 32.0 36.0 40 34.50834461564163 36.0 36.0 36.0 32.0 36.0 41 34.49853683833177 36.0 36.0 36.0 32.0 36.0 42 34.44347981191899 36.0 36.0 36.0 32.0 36.0 43 34.4418770860669 36.0 36.0 36.0 32.0 36.0 44 34.366485801693564 36.0 36.0 36.0 32.0 36.0 45 34.346029207546906 36.0 36.0 36.0 32.0 36.0 46 34.30161368912339 36.0 36.0 36.0 32.0 36.0 47 34.29476529898407 36.0 36.0 36.0 32.0 36.0 48 34.248893405679325 36.0 36.0 36.0 32.0 36.0 49 34.22768591445864 36.0 36.0 36.0 32.0 36.0 50 33.64853892657393 36.0 36.0 36.0 27.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 2.0 17 6.0 18 2.0 19 16.0 20 52.0 21 172.0 22 566.0 23 1598.0 24 4383.0 25 9845.0 26 20566.0 27 37714.0 28 62730.0 29 97680.0 30 142164.0 31 203928.0 32 297048.0 33 483537.0 34 1015350.0 35 3369100.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.7194685101413 18.278456815143716 12.508229693866701 26.493844980848287 2 15.487750846698425 20.188923990827014 38.380993582459254 25.942331580015303 3 18.252976887595413 24.279144750191335 28.707522816743168 28.76035554547008 4 12.001371279013515 16.629733783929584 36.3276347525259 35.041260184531 5 14.058794457805327 37.277193263330815 33.51009143020225 15.153920848661611 6 33.97925642130893 36.158235349701805 16.906463865622847 12.956044363366411 7 30.296645342226462 30.34392664141981 20.64268110895442 18.716746907399305 8 27.658406681401537 34.164413249968376 18.934895385140656 19.242284683489434 9 27.431956011362256 14.271526503669346 18.455994917159337 39.84052256780906 10 15.969202342122763 26.95708677990488 31.429600145203672 25.644110732768677 11 37.214023938215874 20.72961440608653 23.145414742293514 18.91094691340408 12 25.46243743749405 23.19956327842584 29.11590854393136 22.22209074014875 13 29.704581801222673 19.901190826304333 25.224617719175207 25.169609653297787 14 23.40566673731903 20.316905440336512 24.965604827749186 31.311822994595268 15 24.83682287977641 28.955798691659375 21.75465219683931 24.45272623172491 16 25.37026167124547 25.827260120189845 24.724588869326915 24.077889339237775 17 23.642190148369604 26.460864601859228 25.429220772440775 24.467724477330393 18 24.353657138054174 25.146773301833292 27.141797357567203 23.35777220254533 19 25.899771337484296 24.518120721278837 25.044949412333857 24.53715852890301 20 26.173273356312265 24.66758886354172 24.93993219782115 24.219205582324864 21 26.84565802250429 24.191432638528767 24.078580552200833 24.884328786766112 22 26.073258085729783 25.109933069993986 24.78030352995266 24.036505314323573 23 24.10105770201273 25.03301185781756 25.520846022393073 25.345084417776633 24 25.08047163154199 24.99255625444297 25.4203519225398 24.506620191475236 25 24.819607417291934 24.947305736017746 25.63137403947824 24.601712807212085 26 23.960534987495112 26.016258181778312 25.96518053034787 24.058026300378703 27 24.78725294514947 25.35312817658732 25.338788122745985 24.520830755517224 28 24.126999154055966 25.485069113854042 25.482702350039844 24.905229382050152 29 24.39117090129208 24.808742712941175 25.365969193833198 25.43411719193355 30 24.027883233044722 25.21465742260734 25.944559659701483 24.812899684646453 31 25.359457127412927 24.65027133535421 24.919187626369947 25.071083910862917 32 24.698995834860412 25.45367722273908 24.764882099088346 25.082444843312164 33 24.077547205306296 25.18616992117787 25.720015683329017 25.016267190186813 34 24.811112843630532 25.330195771600728 25.86464514135038 23.99404624341836 35 25.083932269460345 25.187337939195658 25.718497119885843 24.010232671458155 36 23.971616591829527 25.49158697835533 25.640959597691136 24.895836832124008 37 25.035971248061344 25.320591355484336 24.756380502365367 24.887056894088953 38 24.611333903817247 25.393895822119006 25.08914463786019 24.905625636203556 39 25.576762971336926 24.623525636384898 24.91122841359032 24.888482978687858 40 26.082598340431794 24.8238087929062 25.264839338748285 23.828753527913722 41 24.74337194283441 24.966839266067947 26.225676762635274 24.064112028462368 42 25.64175921667186 25.725429676875056 25.35451616007579 23.278294946377294 43 24.525492570975118 24.945356902954554 25.831010131595892 24.698140394474436 44 24.060003699721165 25.495881841417006 25.205925331413052 25.23818912744878 45 24.36976778747781 25.724482952206035 25.182680417250946 24.72306884306521 46 24.39630836312303 24.825829903066165 25.287823981439487 25.490037752371315 47 25.122652154452613 24.83593012029239 25.47010858404979 24.57130914120521 48 25.076465957160966 25.401367964488053 24.62283871425817 24.89932736409281 49 24.828036980815423 25.275688126159523 25.048121105957964 24.848153787067087 50 24.66836895842611 26.104858179188223 24.47845779536337 24.7483150670223 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 22.0 2 36.0 3 119.5 4 203.0 5 279.5 6 356.0 7 343.5 8 331.0 9 430.5 10 530.0 11 874.0 12 1218.0 13 2351.5 14 3485.0 15 4842.0 16 6199.0 17 6719.5 18 7240.0 19 7719.0 20 8198.0 21 9700.5 22 11203.0 23 13487.0 24 15771.0 25 21684.0 26 27597.0 27 40729.0 28 53861.0 29 68254.5 30 82648.0 31 98913.0 32 115178.0 33 140384.0 34 165590.0 35 198522.5 36 231455.0 37 251458.5 38 271462.0 39 279967.5 40 288473.0 41 299158.5 42 309844.0 43 310684.0 44 311524.0 45 338703.0 46 365882.0 47 386194.0 48 406506.0 49 419734.5 50 432963.0 51 416617.0 52 400271.0 53 394545.5 54 388820.0 55 386645.5 56 384471.0 57 372804.0 58 361137.0 59 330384.0 60 299631.0 61 263395.0 62 227159.0 63 197621.5 64 168084.0 65 144977.5 66 121871.0 67 106908.5 68 91946.0 69 82963.0 70 73980.0 71 56506.5 72 39033.0 73 33565.0 74 28097.0 75 21819.0 76 15541.0 77 13378.5 78 11216.0 79 9403.0 80 7590.0 81 6057.0 82 4524.0 83 3597.5 84 2671.0 85 1931.5 86 1192.0 87 882.5 88 573.0 89 432.5 90 292.0 91 251.0 92 210.0 93 171.0 94 132.0 95 124.0 96 116.0 97 93.0 98 70.0 99 71.0 100 72.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008683606951062045 2 3.82844394636002E-4 3 3.82844394636002E-4 4 0.0 5 0.0 6 1.2181412556600063E-4 7 3.480403587600018E-5 8 1.740201793800009E-5 9 0.0011659352018460062 10 8.526988789620045E-4 11 0.0 12 1.2181412556600063E-4 13 5.220605381400027E-4 14 2.4362825113200125E-4 15 0.004350504484500023 16 8.875029148380047E-4 17 0.0 18 2.262262331940012E-4 19 0.0 20 6.438746637060034E-4 21 0.0 22 1.5661816144200082E-4 23 6.960807175200036E-4 24 4.3505044845000226E-4 25 0.0018098098655520095 26 0.0053424195069660275 27 0.005516439686346029 28 0.0037762378925460197 29 0.002488488565134013 30 0.0036718257849180187 31 0.0075524757850920395 32 0.0033759914799720175 33 0.004019866143678021 34 0.0029931470853360154 35 0.002784322870080014 36 0.007430661659526038 37 0.0035500116593520188 38 0.008022330269418041 39 0.004385308520376023 40 0.0025406946189480135 41 0.0035848156952280187 42 0.0018620159193660096 43 0.001392161435040007 44 0.0014095634529780073 45 0.0014965735426680077 46 0.001148533183908006 47 0.0022274582960640117 48 0.00194902600905601 49 3.654423766980019E-4 50 0.001548779596482008 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 5746460.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.53118583765564 #Duplication Level Percentage of deduplicated Percentage of total 1 63.68648126129555 21.991697197801706 2 15.625073622391303 10.791046419636906 3 7.083370591253396 7.3379155873066715 4 4.0076073993793 5.535497434893219 5 2.432522417336126 4.199894182364855 6 1.5536018100001279 3.218862769129955 7 1.0798287779111582 2.610143774202915 8 0.7919722794321132 2.187819356747363 9 0.5914833969392349 1.8382160789636903 >10 2.8222942545568412 17.098234498099426 >50 0.1849902308994307 4.383223823192063 >100 0.1144894932298815 7.487070576985433 >500 0.014816734362891725 3.532273299899598 >1k 0.011061793631549018 7.022241413344682 >5k 4.0593738097222706E-4 0.7658635874317082 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 1.740201793800009E-5 0.0 14 0.0 0.0 0.0 1.740201793800009E-5 0.0 15 0.0 0.0 0.0 5.2206053814000275E-5 0.0 16 0.0 0.0 0.0 6.960807175200037E-5 0.0 17 0.0 0.0 0.0 1.0441210762800055E-4 0.0 18 0.0 0.0 0.0 1.2181412556600063E-4 0.0 19 0.0 0.0 0.0 1.5661816144200082E-4 0.0 20 0.0 0.0 0.0 2.088242152560011E-4 0.0 21 0.0 0.0 0.0 3.306383408220017E-4 0.0 22 0.0 0.0 0.0 4.3505044845000226E-4 0.0 23 0.0 0.0 0.0 5.916686098920031E-4 0.0 24 0.0 0.0 0.0 0.0010093170404040053 0.0 25 0.0 0.0 0.0 0.0013747594171020072 0.0 26 0.0 0.0 0.0 0.0015835836323580081 0.0 27 0.0 0.0 0.0 0.0020186340808080105 0.0 28 0.0 0.0 0.0 0.002853930941832015 0.0 29 0.0 0.0 0.0 0.004159082287182022 0.0 30 0.0 0.0 0.0 0.007187033408394037 0.0 31 0.0 0.0 0.0 0.018219912781086096 0.0 32 0.0 0.0 0.0 0.031532456503656166 0.0 33 0.0 0.0 0.0 0.043244014575930224 0.0 34 0.0 0.0 0.0 0.058035729823230305 0.0 35 0.0 0.0 0.0 0.0758205921558664 0.0 36 0.0 0.0 0.0 0.10058366368164053 0.0 37 0.0 1.740201793800009E-5 0.0 0.14168723005119674 0.0 38 0.0 1.740201793800009E-5 0.0 0.19580750583837703 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 8155 0.0 27.677542 1 GGTATCA 3295 0.0 21.965677 1 TGTAGGA 5930 0.0 19.95746 2 GATATAC 2335 0.0 19.502378 1 GTAGGAC 5840 0.0 19.32334 3 TTAGGAC 3470 0.0 19.081598 3 TAGGACG 5535 0.0 18.957714 4 TCAACGC 12005 0.0 18.763897 4 AACGCAG 12195 0.0 18.435476 6 ATCAACG 12220 0.0 18.39744 3 CTGTAGG 6130 0.0 18.37442 1 GACGTGA 3060 0.0 18.187975 7 CAACGCA 12360 0.0 18.171572 5 AGGACGT 5710 0.0 17.991444 5 TATCAAC 12550 0.0 17.983793 2 GTCCTAC 4775 0.0 17.96782 1 GGACGTG 5640 0.0 17.902712 6 ATACCGT 1755 0.0 16.921618 6 CGTCGTA 1840 0.0 16.857975 10 TCCTACA 5260 0.0 16.853767 2 >>END_MODULE