##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063865_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3609716 Sequences flagged as poor quality 0 Sequence length 50 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.15080216837003 32.0 32.0 32.0 32.0 32.0 2 30.983552168647062 32.0 32.0 32.0 32.0 32.0 3 31.24036433891198 32.0 32.0 32.0 32.0 32.0 4 31.39716891855204 32.0 32.0 32.0 32.0 32.0 5 31.264618601574195 32.0 32.0 32.0 32.0 32.0 6 34.85188696285248 36.0 36.0 36.0 32.0 36.0 7 34.890513270296054 36.0 36.0 36.0 36.0 36.0 8 34.79559056723576 36.0 36.0 36.0 32.0 36.0 9 34.99376848483371 36.0 36.0 36.0 36.0 36.0 10 34.749325154665904 36.0 36.0 36.0 32.0 36.0 11 34.997534986131875 36.0 36.0 36.0 36.0 36.0 12 34.859278680095606 36.0 36.0 36.0 32.0 36.0 13 34.936561491264136 36.0 36.0 36.0 32.0 36.0 14 34.85840021763485 36.0 36.0 36.0 32.0 36.0 15 34.801595194746625 36.0 36.0 36.0 32.0 36.0 16 34.82798729872378 36.0 36.0 36.0 32.0 36.0 17 34.77584303031042 36.0 36.0 36.0 32.0 36.0 18 34.788489731602155 36.0 36.0 36.0 32.0 36.0 19 34.79106472642169 36.0 36.0 36.0 32.0 36.0 20 34.78511301166075 36.0 36.0 36.0 32.0 36.0 21 34.78477364978298 36.0 36.0 36.0 32.0 36.0 22 34.76255084887565 36.0 36.0 36.0 32.0 36.0 23 34.6978532383157 36.0 36.0 36.0 32.0 36.0 24 34.66881605090262 36.0 36.0 36.0 32.0 36.0 25 34.63471863160426 36.0 36.0 36.0 32.0 36.0 26 34.558012320082796 36.0 36.0 36.0 32.0 36.0 27 34.5524492785582 36.0 36.0 36.0 32.0 36.0 28 34.5263951513083 36.0 36.0 36.0 32.0 36.0 29 34.490451326364735 36.0 36.0 36.0 32.0 36.0 30 34.47174680778211 36.0 36.0 36.0 32.0 36.0 31 34.47480466607345 36.0 36.0 36.0 32.0 36.0 32 34.42286927835874 36.0 36.0 36.0 32.0 36.0 33 34.40216100103166 36.0 36.0 36.0 32.0 36.0 34 34.39875048341753 36.0 36.0 36.0 32.0 36.0 35 34.356887910295434 36.0 36.0 36.0 32.0 36.0 36 34.322792430207805 36.0 36.0 36.0 32.0 36.0 37 34.3201484548923 36.0 36.0 36.0 32.0 36.0 38 34.26877100580766 36.0 36.0 36.0 32.0 36.0 39 34.26967523206812 36.0 36.0 36.0 32.0 36.0 40 34.25335871298462 36.0 36.0 36.0 32.0 36.0 41 34.239208292286705 36.0 36.0 36.0 32.0 36.0 42 34.15690209423678 36.0 36.0 36.0 32.0 36.0 43 34.167523705466024 36.0 36.0 36.0 32.0 36.0 44 34.08013400500206 36.0 36.0 36.0 32.0 36.0 45 34.05890186374773 36.0 36.0 36.0 32.0 36.0 46 34.042068960549805 36.0 36.0 36.0 32.0 36.0 47 34.02686582545552 36.0 36.0 36.0 32.0 36.0 48 33.979382865577236 36.0 36.0 36.0 32.0 36.0 49 33.96078611170519 36.0 36.0 36.0 32.0 36.0 50 33.25953482213005 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 4.0 18 4.0 19 7.0 20 30.0 21 125.0 22 346.0 23 1109.0 24 2820.0 25 6432.0 26 13755.0 27 25523.0 28 43616.0 29 70536.0 30 106527.0 31 161289.0 32 245664.0 33 409616.0 34 808895.0 35 1713418.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.54938411839998 18.595939558825975 12.610556703772863 26.244119619001182 2 16.07880650535695 20.087946318006306 36.96091810348888 26.872329073147867 3 18.034740177260726 24.158803848839977 28.390610771887275 29.41584520201202 4 12.22187562678061 16.22684443873147 35.71591227675529 35.83536765773263 5 14.874743608638463 36.44760418825193 32.6967273879718 15.980924815137811 6 35.0870417870944 35.554254740625474 16.226099487963413 13.132603984316715 7 31.149735879498554 30.01923142984102 20.2199840652284 18.611048625432026 8 28.47985824923623 32.955141069269715 18.43230880213291 20.132691879361147 9 27.116621727305944 14.272016985443859 18.183528230626603 40.4278330566236 10 15.90674305749286 26.44088137379377 30.778575293176715 26.873800275536663 11 37.74516824735471 20.726954898101376 22.310182382819697 19.217694471724222 12 25.556263522554445 23.03999490263761 28.18968836831768 23.214053206490274 13 29.348679765265747 19.355076420499326 25.229333526147197 26.06691028808773 14 23.78380744370459 19.83240749667286 24.55508866645169 31.82869639317086 15 25.254360173174085 27.677517428087235 21.599053842490484 25.469068556248192 16 26.25574046252815 25.5878701813982 23.36706575064902 24.78932360542463 17 24.309419355982577 26.09202496816924 24.6663449423722 24.932210733475983 18 25.195992470298815 24.749307768917404 25.875438574620365 24.179261186163412 19 25.941410887009088 24.669648434848735 24.864760791364414 24.524179886777763 20 26.288315217767703 24.071258097983346 24.367654330906074 25.27277235334287 21 27.293449124529463 23.92636983075677 23.88736399207029 24.892817052643476 22 26.24936629258306 24.207540217912243 24.571641489205504 24.971452000299195 23 24.505172326384724 24.065300880324656 25.4119812471483 26.01754554614232 24 25.242824417605085 24.78190058085047 24.819742987450226 25.155532014094216 25 25.07427325243154 24.436564935489482 25.092557604018566 25.39660420806041 26 24.808057525255954 25.351948791329654 25.291414845915483 24.54857883749891 27 25.528783685320168 24.732858476635332 24.469692562148325 25.268665275896176 28 24.706517589551822 24.545806638212802 25.347643746401943 25.400032025833436 29 24.82859060741078 24.492157512966 25.265421720158255 25.41383015946497 30 24.568358657511066 24.67028147763987 25.632938219644647 25.12842164520442 31 25.63627387204484 24.45019354738614 24.401737438259328 25.51179514230969 32 25.16329285722399 24.679613000707278 24.249733836174954 25.90736030589378 33 24.428732469128516 24.58747753535679 25.134967936544083 25.848822058970605 34 25.464792821624666 24.440391077285444 25.19379469135108 24.90102140973881 35 25.84436477433693 24.42293579328719 25.154511280590935 24.578188151784943 36 24.65387982623343 24.95979985814974 24.831746752958907 25.554573562657918 37 25.86878191840966 24.638089491505138 24.47358345564626 25.019545134438943 38 25.040726358764314 24.50640761377892 24.945781303332137 25.507084724124635 39 25.781492844292085 24.28247606498953 24.270646387959108 25.66538470275928 40 25.946219388812363 24.678193985640625 24.887301406128277 24.48828521941873 41 24.88471028107808 24.92440994879768 25.42925785169667 24.761621918427572 42 26.21206639291989 25.135289675321403 24.640423396982875 24.01222053477583 43 25.236143862697467 24.27990527650219 25.031692700484033 25.452258160316305 44 24.874621676466717 24.806249870140665 24.49062588737213 25.82850256602049 45 24.998095392178836 25.11550234412205 24.634682368207372 25.251719895491743 46 25.009993935765657 24.667831494624608 24.64755273930801 25.674621830301724 47 25.47553113212147 24.444571880693076 25.02357570599682 25.056321281188637 48 26.09862688088784 25.195274353714264 23.90327080213815 24.802827963259748 49 25.18928155288165 25.086309063739886 24.315275887039984 25.409133496338477 50 25.255709466506982 25.311670369228374 24.169541588785435 25.26307857547921 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 6.0 1 16.0 2 26.0 3 85.5 4 145.0 5 172.0 6 199.0 7 204.0 8 209.0 9 283.5 10 358.0 11 604.0 12 850.0 13 1631.0 14 2412.0 15 3321.5 16 4231.0 17 4601.0 18 4971.0 19 5185.5 20 5400.0 21 6318.0 22 7236.0 23 8511.0 24 9786.0 25 13175.5 26 16565.0 27 21977.0 28 27389.0 29 33544.5 30 39700.0 31 46646.0 32 53592.0 33 63948.5 34 74305.0 35 88832.5 36 103360.0 37 121124.5 38 138889.0 39 150239.5 40 161590.0 41 175472.5 42 189355.0 43 191845.5 44 194336.0 45 213376.0 46 232416.0 47 250310.5 48 268205.0 49 275958.5 50 283712.0 51 273390.5 52 263069.0 53 261066.0 54 259063.0 55 261605.5 56 264148.0 57 258055.5 58 251963.0 59 229861.0 60 207759.0 61 183482.5 62 159206.0 63 138064.0 64 116922.0 65 99838.5 66 82755.0 67 71352.5 68 59950.0 69 54853.0 70 49756.0 71 38065.5 72 26375.0 73 22445.0 74 18515.0 75 14282.0 76 10049.0 77 8906.0 78 7763.0 79 6522.0 80 5281.0 81 4298.0 82 3315.0 83 2784.0 84 2253.0 85 1634.5 86 1016.0 87 723.5 88 431.0 89 352.5 90 274.0 91 235.5 92 197.0 93 159.0 94 121.0 95 128.0 96 135.0 97 101.0 98 67.0 99 78.5 100 90.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.007091970670268797 2 3.878421460303248E-4 3 1.3851505215368743E-4 4 0.0 5 0.0 6 3.601391355995873E-4 7 0.0 8 0.0 9 0.001025011385937287 10 9.141993442143371E-4 11 2.7703010430737487E-5 12 1.6621806258442493E-4 13 4.7095117732253735E-4 14 2.216240834458999E-4 15 0.004681808762794636 16 9.141993442143371E-4 17 0.0 18 3.0473311473811236E-4 19 2.7703010430737487E-5 20 5.817632190454872E-4 21 0.0 22 1.6621806258442493E-4 23 6.925752607684372E-4 24 2.493270938766374E-4 25 0.001994616751013099 26 0.0047372147836561105 27 0.005706820148731922 28 0.0036013913559958736 29 0.0022993498657512116 30 0.003379767272549973 31 0.007313594753714697 32 0.0026871920117815364 33 0.00429396661676431 34 0.0026871920117815364 35 0.0030196281369503863 36 0.0076460308788835465 37 0.003379767272549973 38 0.007202782711991747 39 0.004155451564610623 40 0.002437864917904899 41 0.0031581431891040735 42 0.0014959625632598244 43 0.0014405565423983493 44 0.001135823427660237 45 0.001357447511106137 46 7.479812816299122E-4 47 0.0018838047092901494 48 0.0014128535319676118 49 3.878421460303248E-4 50 0.0014682595528290867 >>END_MODULE >>Sequence Length Distribution pass #Length Count 50 3609716.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.922308830726244 #Duplication Level Percentage of deduplicated Percentage of total 1 70.23576831566423 30.146813386082773 2 15.178189773029038 13.029658978586461 3 5.861422378999255 7.547573446162084 4 2.8496645672662817 4.892567304807248 5 1.6335329271838366 3.505750239287244 6 0.9573797669279124 2.465577001462114 7 0.6326808290246932 1.9009285354274454 8 0.4484678656703452 1.5399420984767365 9 0.33649439322928243 1.299880463939559 >10 1.6718357539780997 12.60528206909658 >50 0.0952632770673543 2.8387381975763457 >100 0.07605969897015272 6.854900261488127 >500 0.01441167755569537 4.3428390695555725 >1k 0.00882877543390002 7.0295489480517865 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGGCCATGAT 4592 0.12721222389794654 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAA 4397 0.12181013686395274 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATACGAATGCC 4310 0.11939997495647857 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATGGAA 4193 0.11615872273608228 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTTCATTAAT 3848 0.10660118413747786 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGATTAATGAAAAC 3774 0.10455116136560327 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGAC 3729 0.10330452589622009 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCG 3723 0.10313830783363566 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAA 3701 0.10252884160415945 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTGA 3615 0.10014638270711602 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.6621806258442493E-4 2 0.0 0.0 0.0 0.0 1.6621806258442493E-4 3 0.0 0.0 0.0 0.0 1.6621806258442493E-4 4 0.0 0.0 0.0 0.0 1.6621806258442493E-4 5 0.0 0.0 0.0 0.0 1.6621806258442493E-4 6 0.0 0.0 0.0 0.0 2.493270938766374E-4 7 0.0 0.0 0.0 0.0 2.493270938766374E-4 8 0.0 0.0 0.0 2.7703010430737487E-5 2.493270938766374E-4 9 0.0 0.0 0.0 2.7703010430737487E-5 2.493270938766374E-4 10 0.0 0.0 0.0 2.7703010430737487E-5 2.7703010430737485E-4 11 0.0 0.0 0.0 2.7703010430737487E-5 2.7703010430737485E-4 12 0.0 0.0 0.0 2.7703010430737487E-5 0.001025011385937287 13 0.0 0.0 0.0 2.7703010430737487E-5 0.0013020414902446618 14 0.0 0.0 0.0 2.7703010430737487E-5 0.0013020414902446618 15 0.0 0.0 0.0 2.7703010430737487E-5 0.0015236655736905619 16 0.0 0.0 0.0 2.7703010430737487E-5 0.0016067746049827742 17 0.0 0.0 0.0 5.540602086147497E-5 0.0016344776154135117 18 0.0 0.0 0.0 5.540602086147497E-5 0.0017452896571364617 19 0.0 0.0 0.0 5.540602086147497E-5 0.0017452896571364617 20 0.0 0.0 0.0 5.540602086147497E-5 0.002050022771874574 21 0.0 0.0 0.0 5.540602086147497E-5 0.002105428792736049 22 0.0 0.0 0.0 5.540602086147497E-5 0.002160834813597524 23 0.0 0.0 0.0 5.540602086147497E-5 0.002216240834458999 24 0.0 0.0 0.0 1.6621806258442493E-4 0.002216240834458999 25 0.0 0.0 0.0 2.216240834458999E-4 0.002216240834458999 26 0.0 0.0 0.0 2.7703010430737485E-4 0.002271646855320474 27 0.0 0.0 0.0 3.601391355995873E-4 0.002327052876181949 28 0.0 0.0 0.0 5.817632190454873E-4 0.002327052876181949 29 0.0 0.0 0.0 8.587933233528621E-4 0.002327052876181949 30 0.0 0.0 0.0 0.0015790715945520368 0.0023547558866126865 31 0.0 0.0 0.0 0.0039338274811647235 0.002382458897043424 32 0.0 0.0 0.0 0.007091970670268797 0.0024101619074741614 33 0.0 0.0 0.0 0.010277816869803608 0.0024655679283356363 34 0.0 0.0 0.0 0.013823802204938005 0.0026040829804893236 35 0.0 0.0 0.0 0.018450204946871166 0.0026040829804893236 36 0.0 0.0 0.0 0.02545906658584775 0.0026040829804893236 37 0.0 0.0 0.0 0.037011221935465285 0.0026317859909200615 38 0.0 0.0 0.0 0.053439107120892615 0.0026871920117815364 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATCAA 4835 0.0 26.162224 1 GGTATCA 1995 0.0 22.274693 1 CGCAATA 1245 0.0 19.439306 36 TAGGACG 1330 0.0 19.021177 4 TTAGGAC 1085 0.0 18.855778 3 CTAGCGG 1305 0.0 18.376186 29 CGTCGTA 1200 0.0 18.149944 10 ATACCGT 1225 0.0 18.137712 6 ATACGAA 1300 0.0 18.107384 40 TCTAGCG 1340 0.0 17.895962 28 TAGCGGC 1345 0.0 17.83067 30 TACCGTC 1210 0.0 17.817137 7 TACGAAT 1355 0.0 17.534756 41 AACGCAG 7325 0.0 17.388742 6 AATACGA 1380 0.0 17.376997 39 TCAACGC 7265 0.0 17.35043 4 CAATACG 1395 0.0 17.348577 38 GTATTAC 330 0.0 17.33256 1 ACCGTCG 1195 0.0 17.304905 8 TAGGACA 785 0.0 17.094303 4 >>END_MODULE