##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063098_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 693916 Sequences flagged as poor quality 0 Sequence length 38 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.151074481637547 32.0 32.0 32.0 32.0 32.0 2 31.29624046714588 32.0 32.0 32.0 32.0 32.0 3 31.378377209921663 32.0 32.0 32.0 32.0 32.0 4 31.478752471480696 32.0 32.0 32.0 32.0 32.0 5 31.407000270926165 32.0 32.0 32.0 32.0 32.0 6 34.92951740556494 36.0 36.0 36.0 36.0 36.0 7 34.954751007326536 36.0 36.0 36.0 36.0 36.0 8 34.902370027496126 36.0 36.0 36.0 36.0 36.0 9 34.988892027277075 36.0 36.0 36.0 36.0 36.0 10 34.85522166948161 36.0 36.0 36.0 32.0 36.0 11 35.01557825442849 36.0 36.0 36.0 36.0 36.0 12 34.93638711313761 36.0 36.0 36.0 32.0 36.0 13 34.97558205892356 36.0 36.0 36.0 36.0 36.0 14 34.92073536278166 36.0 36.0 36.0 32.0 36.0 15 34.886790331971014 36.0 36.0 36.0 32.0 36.0 16 34.897120112520824 36.0 36.0 36.0 32.0 36.0 17 34.86631667233498 36.0 36.0 36.0 32.0 36.0 18 34.86988482755838 36.0 36.0 36.0 32.0 36.0 19 34.85137826480439 36.0 36.0 36.0 32.0 36.0 20 34.833798327175046 36.0 36.0 36.0 32.0 36.0 21 34.81954444053747 36.0 36.0 36.0 32.0 36.0 22 34.80761792493616 36.0 36.0 36.0 32.0 36.0 23 34.74339977749468 36.0 36.0 36.0 32.0 36.0 24 34.72608500164285 36.0 36.0 36.0 32.0 36.0 25 34.69847791375325 36.0 36.0 36.0 32.0 36.0 26 34.63817090252999 36.0 36.0 36.0 32.0 36.0 27 34.63300168896524 36.0 36.0 36.0 32.0 36.0 28 34.597598268378306 36.0 36.0 36.0 32.0 36.0 29 34.55472996731593 36.0 36.0 36.0 32.0 36.0 30 34.53599427019985 36.0 36.0 36.0 32.0 36.0 31 34.5232794747491 36.0 36.0 36.0 32.0 36.0 32 34.492687875765945 36.0 36.0 36.0 32.0 36.0 33 34.44155344450913 36.0 36.0 36.0 32.0 36.0 34 34.43078124729794 36.0 36.0 36.0 32.0 36.0 35 34.39230540872382 36.0 36.0 36.0 32.0 36.0 36 34.363427273618136 36.0 36.0 36.0 32.0 36.0 37 34.347642942373426 36.0 36.0 36.0 32.0 36.0 38 33.910004957372365 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 15.0 22 58.0 23 166.0 24 458.0 25 1156.0 26 2433.0 27 4676.0 28 8193.0 29 13206.0 30 19680.0 31 28277.0 32 40606.0 33 63408.0 34 155843.0 35 355739.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.08909812308948 18.740424845032017 12.144791476004285 26.02568555587423 2 15.286144144248007 21.368868854443477 37.607577862450206 25.737409138858308 3 18.14326229687743 25.278275756719832 29.22976268020913 27.348699266193606 4 11.741767015027756 16.58860726658558 36.792781835265366 34.8768438831213 5 13.410701007038316 37.77834781155068 33.76619072049066 15.044760460920342 6 32.99150472320097 36.89500875467456 16.969945886744053 13.143540635380413 7 28.831959003565284 31.23585919869033 21.294137313845805 18.63804448389858 8 27.33784023323279 33.73185434767884 19.972214976531166 18.9580904425572 9 27.374865252805915 13.971338479186961 18.662990782427237 39.99080548557989 10 15.400811350256879 27.568182964526844 32.244039169626966 24.78696651558931 11 37.2838609446563 21.282869421601944 22.5570053697891 18.87626426395266 12 24.10241038514859 24.46254146767467 29.654971653547847 21.780076493628894 13 29.704935042476382 19.742619773315177 25.64564824221987 24.90679694198857 14 23.269098853463532 20.346266695104305 25.742741196340766 30.641893255091396 15 24.71970670801653 27.771949342571723 23.18782100427141 24.320522945140333 16 24.820583471198244 26.27810858951228 24.805019627735923 24.09628831155356 17 23.239268153494084 26.06669971581575 26.154750719107213 24.53928141158296 18 24.069051585494496 25.251183140322457 27.500014410966166 23.179750863216874 19 25.038621389332427 25.212417641328344 26.227237878936354 23.521723090402872 20 24.990921091313645 24.69405518823604 26.35290150392843 23.962122216521884 21 26.502419608193524 24.575811988229088 25.1551344979349 23.766633905642486 22 24.836074787365582 24.999207394576274 26.134218361353135 24.03049945670501 23 23.884591218533654 24.540578398538152 26.314136004934312 25.260694377993882 24 24.08288611301656 25.59589345108054 26.2923754460194 24.028844989883503 25 24.31767579602689 24.839929962603488 26.42557085522002 24.4168233861496 26 23.508753220850938 25.932677730445757 27.081664063085448 23.476904985617857 27 24.559492156820358 25.13708451323289 26.21617921503354 24.087244114913208 28 23.567405853158018 25.4416961130742 26.809152692833138 24.181745340934636 29 23.670732480588427 25.12768116025571 26.78004254117213 24.421543817983732 30 23.713388940448123 25.6620397857954 26.84028037975778 23.784290893998698 31 24.133468604269105 25.41244185175151 25.873016330506864 24.581073213472525 32 23.83501749491293 25.74187653837064 25.8104727373342 24.61263322938223 33 23.595795456510587 25.018590146357774 26.53592077427239 24.849693622859252 34 24.308561843220218 25.465474207252754 26.660863850956023 23.56510009857101 35 24.84277635909822 25.209391338432894 26.72600141803907 23.221830884429814 36 23.754171974705873 26.10229480225272 25.974613641997014 24.168919581044392 37 24.601969114417308 25.774445321912165 25.9577528115795 23.66583275209103 38 23.762962664068848 25.465041878267687 26.359818767689465 24.412176689974004 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 316.0 1 240.5 2 165.0 3 165.0 4 487.0 5 809.0 6 809.0 7 950.0 8 1091.0 9 1062.0 10 1033.0 11 1033.0 12 1321.0 13 1609.0 14 2002.0 15 2395.0 16 2395.0 17 3686.5 18 4978.0 19 4978.0 20 5529.0 21 6080.0 22 6451.0 23 6822.0 24 6822.0 25 8228.0 26 9634.0 27 9634.0 28 12380.5 29 15127.0 30 18136.0 31 21145.0 32 21145.0 33 25123.5 34 29102.0 35 29102.0 36 31098.0 37 33094.0 38 37178.5 39 41263.0 40 41263.0 41 43236.0 42 45209.0 43 49739.5 44 54270.0 45 54270.0 46 55908.0 47 57546.0 48 57546.0 49 59759.5 50 61973.0 51 61028.0 52 60083.0 53 60083.0 54 57055.5 55 54028.0 56 54028.0 57 52339.5 58 50651.0 59 44901.5 60 39152.0 61 39152.0 62 36987.0 63 34822.0 64 28893.0 65 22964.0 66 22964.0 67 19400.5 68 15837.0 69 15837.0 70 12604.5 71 9372.0 72 7237.0 73 5102.0 74 5102.0 75 3844.5 76 2587.0 77 2587.0 78 2547.0 79 2507.0 80 1919.0 81 1331.0 82 1331.0 83 1282.5 84 1234.0 85 1234.0 86 773.5 87 313.0 88 263.5 89 214.0 90 214.0 91 122.0 92 30.0 93 21.5 94 13.0 95 13.0 96 10.0 97 7.0 98 7.0 99 7.5 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.009078908686353969 2 0.0 3 0.0 4 0.0 5 0.0 6 1.4410966168815822E-4 7 2.8821932337631643E-4 8 0.0024498642486986896 9 0.0034586318805157968 10 0.0015852062785697404 11 0.004899728497397379 12 2.8821932337631643E-4 13 1.4410966168815822E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 2.8821932337631643E-4 22 2.8821932337631643E-4 23 0.0 24 0.0 25 1.4410966168815822E-4 26 0.0 27 1.4410966168815822E-4 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 693916.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.14884487558273 #Duplication Level Percentage of deduplicated Percentage of total 1 82.1930939504725 49.43819657871168 2 12.078844489370828 14.530570869349066 3 2.903245340597057 5.238805608819922 4 0.9959288699749917 2.3961588442896073 5 0.4533420127349883 1.3633999199790632 6 0.24135826656262951 0.871045256094909 7 0.17004663510110113 0.7159676073417667 8 0.12183533738414304 0.5862603846946484 9 0.07682397612399566 0.4158786080346918 >10 0.5849389811425092 7.0035880106695325 >50 0.08653498248161946 3.657982215755328 >100 0.08653479420840639 10.118660602422217 >500 0.006508187865181454 2.529121456169989 >1k 9.64175980026882E-4 1.1343640376676216 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 3043 0.43852570051706546 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 2410 0.3473042846684613 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTT 1363 0.19642146888095968 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1008 0.1452625389816635 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 894 0.12883403754921346 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 852 0.1227814317583108 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 839 0.12090800615636474 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 754 0.1086586849128713 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 740 0.10664114964923709 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 730 0.1052000530323555 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTAC 723 0.10419128540053839 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGA 720 0.10375895641547392 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 715 0.10303840810703313 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 1.4410966168815822E-4 7 0.0 0.0 0.0 0.0 1.4410966168815822E-4 8 0.0 0.0 0.0 0.0 1.4410966168815822E-4 9 0.0 0.0 0.0 0.0 1.4410966168815822E-4 10 0.0 0.0 0.0 0.0 1.4410966168815822E-4 11 0.0 0.0 0.0 0.0 1.4410966168815822E-4 12 0.0 0.0 0.0 0.0 8.646579701289493E-4 13 0.0 0.0 0.0 0.0 8.646579701289493E-4 14 0.0 0.0 0.0 0.0 8.646579701289493E-4 15 0.0 0.0 0.0 0.0 8.646579701289493E-4 16 0.0 0.0 0.0 2.8821932337631643E-4 8.646579701289493E-4 17 0.0 0.0 0.0 2.8821932337631643E-4 8.646579701289493E-4 18 0.0 0.0 0.0 2.8821932337631643E-4 8.646579701289493E-4 19 0.0 0.0 0.0 5.764386467526329E-4 8.646579701289493E-4 20 0.0 0.0 0.0 8.646579701289493E-4 0.0010087676318171076 21 0.0 0.0 0.0 0.0010087676318171076 0.0010087676318171076 22 0.0 0.0 0.0 0.0015852062785697404 0.0010087676318171076 23 0.0 0.0 0.0 0.0036027415422039554 0.0010087676318171076 24 0.0 0.0 0.0 0.005332057482461854 0.0011528772935052657 25 0.0 0.0 0.0 0.006773154099343436 0.0011528772935052657 26 0.0 0.0 0.0 0.008214250716225018 0.0011528772935052657 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGACGC 20 0.0037525406 31.999928 28 GCCGCGC 35 0.002065747 22.857092 8 AACTTAT 60 4.716205E-6 21.333284 7 AACGGAC 40 0.004481778 19.999954 15 ACTTATC 75 1.5068399E-6 19.199957 8 TCGAACT 50 7.1921165E-4 19.199957 19 TCGTTTA 195 0.0 18.871752 30 ATCGTTT 195 0.0 18.871752 29 CGTTTAT 195 0.0 18.871752 31 CATCGTT 200 0.0 18.399958 28 ATAACAC 80 2.7930037E-6 17.99996 3 ATTAGCT 90 4.3606633E-7 17.777739 3 ACCGCTG 45 0.0088469535 17.777739 8 TAGATAA 155 0.0 17.548347 4 ACTTATT 55 0.001363928 17.454506 8 GGCATCG 220 0.0 17.454506 26 TCTAGCG 185 0.0 17.297258 28 CTAGCGG 185 0.0 17.297258 29 CGCGTAA 65 2.0989291E-4 17.23073 10 ATATAAC 75 3.2307704E-5 17.06663 3 >>END_MODULE