##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063094_2.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 896648 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.24726760110991 32.0 32.0 32.0 32.0 32.0 2 30.872859806746906 32.0 32.0 32.0 32.0 32.0 3 30.92197495561246 32.0 32.0 32.0 32.0 32.0 4 30.988249569507765 32.0 32.0 32.0 32.0 32.0 5 30.9031938954863 32.0 32.0 32.0 32.0 32.0 6 34.559507186766716 36.0 36.0 36.0 32.0 36.0 7 34.49308981897021 36.0 36.0 36.0 32.0 36.0 8 34.485057681498205 36.0 36.0 36.0 32.0 36.0 9 34.60074410470999 36.0 36.0 36.0 32.0 36.0 10 34.33895463994789 36.0 36.0 36.0 32.0 36.0 11 34.59457445954265 36.0 36.0 36.0 32.0 36.0 12 34.40812894246125 36.0 36.0 36.0 32.0 36.0 13 34.501692972047 36.0 36.0 36.0 32.0 36.0 14 34.39979456821406 36.0 36.0 36.0 32.0 36.0 15 34.34609121974287 36.0 36.0 36.0 32.0 36.0 16 34.35482374354262 36.0 36.0 36.0 32.0 36.0 17 34.29257523576699 36.0 36.0 36.0 32.0 36.0 18 34.31140090648727 36.0 36.0 36.0 32.0 36.0 19 34.291703098651865 36.0 36.0 36.0 32.0 36.0 20 34.2807143940543 36.0 36.0 36.0 32.0 36.0 21 34.26193779498755 36.0 36.0 36.0 32.0 36.0 22 34.234887045975675 36.0 36.0 36.0 32.0 36.0 23 34.187503903426986 36.0 36.0 36.0 32.0 36.0 24 34.16143235695613 36.0 36.0 36.0 32.0 36.0 25 34.14072077336926 36.0 36.0 36.0 32.0 36.0 26 34.08871374273963 36.0 36.0 36.0 32.0 36.0 27 34.085901044780115 36.0 36.0 36.0 32.0 36.0 28 34.05464686253691 36.0 36.0 36.0 32.0 36.0 29 34.032513316262346 36.0 36.0 36.0 32.0 36.0 30 34.00117771968487 36.0 36.0 36.0 32.0 36.0 31 34.02034800724476 36.0 36.0 36.0 32.0 36.0 32 33.97607310784165 36.0 36.0 36.0 32.0 36.0 33 33.93804926794015 36.0 36.0 36.0 32.0 36.0 34 33.94946958003587 36.0 36.0 36.0 32.0 36.0 35 33.90640362773352 36.0 36.0 36.0 32.0 36.0 36 33.870894710075746 36.0 36.0 36.0 32.0 36.0 37 33.86014132636218 36.0 36.0 36.0 32.0 36.0 38 33.26772378904542 36.0 36.0 36.0 21.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 1.0 10 11.0 11 16.0 12 2.0 13 3.0 14 118.0 15 231.0 16 337.0 17 383.0 18 424.0 19 581.0 20 800.0 21 1108.0 22 1669.0 23 2628.0 24 4036.0 25 5853.0 26 8656.0 27 12488.0 28 17460.0 29 23293.0 30 31340.0 31 42728.0 32 57057.0 33 85183.0 34 190826.0 35 409413.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.576198547918466 17.208461468027185 11.139287716265681 26.07605226778867 2 16.80204614768285 19.629671373237827 37.52766082334679 26.040621655732526 3 19.001154444611757 23.64380643254307 28.591744884471883 28.763294238373295 4 12.429750296389898 15.224681945477641 36.44095679008903 35.90461096804343 5 14.44945201155867 36.59527816533448 33.89174955918911 15.063520263917745 6 34.19037815327548 35.6570645973276 16.882786648480394 13.269770600916525 7 30.18486630204941 30.359405251559142 21.067576127978874 18.388152318412576 8 27.972336816324894 33.137491733053174 19.711970092890926 19.178201357731 9 27.613065550807004 13.954639947894826 18.625257626181067 39.8070368751171 10 15.752963271934012 26.581787197594586 31.858574863602502 25.8066746668689 11 37.78792694827827 20.812045169385193 22.343343092151123 19.056684790185418 12 24.838728385588606 23.634990809971626 28.928402541087454 22.597878263352307 13 29.822491015238956 19.11896916737868 25.24299567883746 25.815544138544904 14 23.419395999803694 20.01615069220439 24.93162724916235 31.632826058829565 15 25.20428140355966 27.39919793403872 22.213880537908494 25.182640124493133 16 25.74907338314701 25.37619584603493 24.143681103262427 24.731049667555638 17 24.036905201464876 25.77206542630505 25.452920880932645 24.738108491297428 18 25.163536834685313 24.35669934986789 26.5852616645122 23.8945021509346 19 25.562584766935544 24.884114676279534 25.314641480476833 24.23865907630809 20 25.557695760943393 24.25509513256323 25.179150805662783 25.008058300830587 21 26.97506443852325 24.248849252334676 24.183267509934854 24.59281879920722 22 25.701669462488404 24.55318902134342 24.879318652294955 24.865822863873223 23 24.11210429219303 24.285768461159233 25.457583335378192 26.144543911269547 24 24.813777871970196 25.0897368685235 25.21589273962365 24.880592519882654 25 24.947852179053864 24.509364298542092 25.276244018338183 25.266539504065854 26 24.450653950193814 25.468752614406426 25.719958727237234 24.360634708162525 27 25.323318770278874 24.75403235251143 24.966622460713772 24.95602641649592 28 24.39894623195389 24.720608704962793 25.672546710209325 25.207898352873993 29 24.36922019878445 24.875271736402585 25.67478185799103 25.080726206821936 30 24.381503663800313 25.149172996062948 25.878810185030282 24.590513155106457 31 25.109525360362973 24.884674926053652 24.687707730125943 25.318091983457432 32 24.579794910917638 25.108132404476535 24.680621825457905 25.631450859147925 33 24.1537692791591 24.580398053011272 25.581665112585384 25.68416755524424 34 25.19003762270881 24.790833131630404 25.60285009029227 24.416279155368514 35 25.75877569686897 24.66029380598097 25.62860425427491 23.95232624287515 36 24.38796134351799 25.446954418903484 25.03837093089663 25.126713306681896 37 25.343563558003435 25.252548912006905 24.8863711144498 24.51751641553986 38 24.56594114399478 25.107211171153082 25.30127872673838 25.02556895811375 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 203.0 1 171.5 2 140.0 3 140.0 4 326.5 5 513.0 6 513.0 7 600.0 8 687.0 9 679.5 10 672.0 11 672.0 12 874.0 13 1076.0 14 1410.5 15 1745.0 16 1745.0 17 2593.0 18 3441.0 19 3441.0 20 4184.5 21 4928.0 22 5665.5 23 6403.0 24 6403.0 25 7857.0 26 9311.0 27 9311.0 28 11909.5 29 14508.0 30 17841.5 31 21175.0 32 21175.0 33 27202.5 34 33230.0 35 33230.0 36 36374.0 37 39518.0 38 45020.0 39 50522.0 40 50522.0 41 53226.5 42 55931.0 43 62904.5 44 69878.0 45 69878.0 46 72071.0 47 74264.0 48 74264.0 49 78859.0 50 83454.0 51 83615.0 52 83776.0 53 83776.0 54 79709.0 55 75642.0 56 75642.0 57 73348.5 58 71055.0 59 63637.5 60 56220.0 61 56220.0 62 53511.5 63 50803.0 64 41655.0 65 32507.0 66 32507.0 67 27140.5 68 21774.0 69 21774.0 70 17391.0 71 13008.0 72 10093.0 73 7178.0 74 7178.0 75 5360.0 76 3542.0 77 3542.0 78 3485.5 79 3429.0 80 2696.5 81 1964.0 82 1964.0 83 1999.0 84 2034.0 85 2034.0 86 1330.5 87 627.0 88 569.0 89 511.0 90 511.0 91 378.0 92 245.0 93 200.0 94 155.0 95 155.0 96 154.0 97 153.0 98 153.0 99 289.5 100 426.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.12334829275256287 2 0.05855140478760896 3 0.012602492839999643 4 0.002788162132743284 5 5.576324265486567E-4 6 1.1152648530973136E-4 7 0.0 8 5.576324265486567E-4 9 0.0 10 4.461059412389254E-4 11 0.002565109162123821 12 0.0026766356474335526 13 0.014498443090265076 14 0.010260436648495285 15 0.023755141370972777 16 0.011933333928141256 17 0.021078505723539226 18 0.006803115603893612 19 0.008029906942300657 20 0.006357009662654687 21 0.006357009662654687 22 0.008029906942300657 23 0.010037383677875822 24 0.015390654972742928 25 0.017621184678937554 26 0.019294081958583523 27 0.009702804221946628 28 0.006245483177344956 29 0.011041122045663404 30 0.004238006441769792 31 0.00579937723610603 32 0.006914642089203345 33 0.009368224766017433 34 0.012825545810619106 35 0.015390654972742928 36 0.015167602002123465 37 0.00992585719256609 38 0.005910903721415762 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 896648.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.10411089592247 #Duplication Level Percentage of deduplicated Percentage of total 1 83.81007594239797 50.3733009863757 2 10.42211347197844 12.528237277793593 3 2.6366996040578328 4.754294562045805 4 1.04043232285266 2.5013703884975387 5 0.5269340257048626 1.583545055789996 6 0.3355600593896732 1.2101123413079549 7 0.21564994605741022 0.9073013790773999 8 0.14121525542174698 0.6790093897651758 9 0.1160987322809162 0.6280209971899381 >10 0.5865843260779486 6.667233028540124 >50 0.07573920293793467 3.201220580674603 >100 0.0833835513264049 10.451456614412033 >500 0.00802123645473323 3.4104186612156506 >1k 0.0014923230613457172 1.104478737314596 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 1833 0.20442804757273758 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1278 0.14253084822583667 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1185 0.13215888509203164 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1171 0.1305975142976954 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1156 0.12892461701804944 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1088 0.12134081601698772 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1084 0.12089471007574878 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1056 0.11777196848707633 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 997 0.11119190585380218 No Hit GTCCTATTCCATTATTCCTAGCTGCGGTATCCAGGCGG 995 0.1109688528831827 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 942 0.10505794916176693 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 1.1152648530973136E-4 0.0 9 0.0 0.0 0.0 2.230529706194627E-4 0.0 10 0.0 0.0 0.0 2.230529706194627E-4 0.0 11 0.0 0.0 0.0 2.230529706194627E-4 0.0 12 0.0 0.0 0.0 2.230529706194627E-4 1.1152648530973136E-4 13 0.0 0.0 0.0 2.230529706194627E-4 1.1152648530973136E-4 14 0.0 0.0 0.0 2.230529706194627E-4 1.1152648530973136E-4 15 0.0 0.0 0.0 2.230529706194627E-4 1.1152648530973136E-4 16 0.0 0.0 0.0 2.230529706194627E-4 1.1152648530973136E-4 17 0.0 0.0 0.0 3.345794559291941E-4 1.1152648530973136E-4 18 0.0 0.0 0.0 4.461059412389254E-4 1.1152648530973136E-4 19 0.0 0.0 0.0 5.576324265486568E-4 1.1152648530973136E-4 20 0.0 0.0 0.0 7.806853971681195E-4 2.230529706194627E-4 21 0.0 0.0 0.0 8.922118824778508E-4 3.345794559291941E-4 22 0.0 0.0 0.0 0.0013383178237167763 3.345794559291941E-4 23 0.0 0.0 0.0 0.0018959502502654331 3.345794559291941E-4 24 0.0 0.0 0.0 0.0022305297061946273 3.345794559291941E-4 25 0.0 0.0 0.0 0.0026766356474335526 3.345794559291941E-4 26 0.0 0.0 0.0 0.003457321044601672 3.345794559291941E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTACCGT 40 0.0044889227 19.995226 6 GCTCTAA 65 9.340794E-6 19.713993 1 GTCCTAC 280 0.0 19.449966 1 GGTCTAT 60 1.12826296E-4 18.687222 1 GTATTAC 70 1.7696957E-5 18.305851 1 CTAGCGG 195 0.0 18.049992 29 CGCGGTC 135 2.3646862E-11 17.777498 10 AACCGCG 135 2.3646862E-11 17.775517 7 CGTAAAC 55 0.0013649815 17.453299 32 TCCTACA 355 0.0 17.130316 2 TAGCGGC 200 0.0 16.7988 30 TCTAGCG 210 0.0 16.760706 28 TAGGACG 250 0.0 16.636026 4 CGGTCCT 135 4.4201443E-10 16.592333 12 GAACCGC 155 1.0913936E-11 16.512186 6 CGACCCG 165 1.8189894E-12 16.480913 5 GTCGTAA 60 0.002442508 15.998857 30 CTACAGT 485 0.0 15.501453 4 ATAGTAT 125 5.1470124E-8 15.356333 6 AGGACGT 265 0.0 15.090735 5 >>END_MODULE