##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR4063094_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 896648 Sequences flagged as poor quality 0 Sequence length 38 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.246099918808717 32.0 32.0 32.0 32.0 32.0 2 31.30756216486291 32.0 32.0 32.0 32.0 32.0 3 31.38786569534533 32.0 32.0 32.0 32.0 32.0 4 31.48691459747861 32.0 32.0 32.0 32.0 32.0 5 31.410700743212498 32.0 32.0 32.0 32.0 32.0 6 34.94034336774297 36.0 36.0 36.0 36.0 36.0 7 34.970391948679975 36.0 36.0 36.0 36.0 36.0 8 34.91013084287257 36.0 36.0 36.0 36.0 36.0 9 35.00827303468028 36.0 36.0 36.0 36.0 36.0 10 34.858279949322366 36.0 36.0 36.0 32.0 36.0 11 35.03772829471543 36.0 36.0 36.0 36.0 36.0 12 34.93652804668053 36.0 36.0 36.0 32.0 36.0 13 34.99150948867337 36.0 36.0 36.0 36.0 36.0 14 34.94499402218039 36.0 36.0 36.0 32.0 36.0 15 34.91385694274676 36.0 36.0 36.0 32.0 36.0 16 34.911171384980506 36.0 36.0 36.0 32.0 36.0 17 34.8864682684844 36.0 36.0 36.0 32.0 36.0 18 34.88539203790116 36.0 36.0 36.0 32.0 36.0 19 34.879733184036546 36.0 36.0 36.0 32.0 36.0 20 34.86481428609666 36.0 36.0 36.0 32.0 36.0 21 34.853919263746754 36.0 36.0 36.0 32.0 36.0 22 34.83656128157315 36.0 36.0 36.0 32.0 36.0 23 34.77783924126302 36.0 36.0 36.0 32.0 36.0 24 34.75458262328138 36.0 36.0 36.0 32.0 36.0 25 34.73517255377807 36.0 36.0 36.0 32.0 36.0 26 34.66604174659398 36.0 36.0 36.0 32.0 36.0 27 34.64685584532615 36.0 36.0 36.0 32.0 36.0 28 34.62615429912296 36.0 36.0 36.0 32.0 36.0 29 34.583228870192094 36.0 36.0 36.0 32.0 36.0 30 34.55791124276193 36.0 36.0 36.0 32.0 36.0 31 34.55730899974126 36.0 36.0 36.0 32.0 36.0 32 34.52871026311328 36.0 36.0 36.0 32.0 36.0 33 34.49257791240264 36.0 36.0 36.0 32.0 36.0 34 34.4972988285258 36.0 36.0 36.0 32.0 36.0 35 34.44740745532249 36.0 36.0 36.0 32.0 36.0 36 34.43261904337042 36.0 36.0 36.0 32.0 36.0 37 34.41807822021574 36.0 36.0 36.0 32.0 36.0 38 33.972625824180724 36.0 36.0 36.0 32.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 19 1.0 20 2.0 21 14.0 22 55.0 23 190.0 24 550.0 25 1366.0 26 2870.0 27 5641.0 28 9892.0 29 16303.0 30 24496.0 31 35847.0 32 51123.0 33 82163.0 34 203278.0 35 462857.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.95341462843351 18.346608013437894 11.856644608501966 26.84333274962663 2 15.792931005255129 20.704334365325078 36.79258750368037 26.710147125739418 3 18.035282518892586 24.495342653973466 28.93119708068272 28.538177746451225 4 11.961019175906657 16.067098944287935 36.454632039846274 35.517249839959135 5 13.902110973313942 37.13932334650833 33.69192815909922 15.266637521078504 6 34.10305281788709 36.168414102762846 16.538169424533848 13.19036365481622 7 29.856062954891694 30.627608343129143 21.11322021497989 18.40310848699927 8 27.82980621776105 33.49047818207166 19.441014917050047 19.238700683117248 9 27.39093969088147 13.789099880216012 18.457552525389968 40.36240790351255 10 15.576537662398495 26.857803102035717 31.878787067676218 25.686872167889568 11 37.90026756069189 20.79701634696566 22.21467535263027 19.088040739712188 12 24.60999188087187 23.778004300461273 28.89015533408874 22.721848484578118 13 29.800913849039812 19.19830211889406 25.144231787983458 25.856552244082675 14 23.412085902160047 19.92732934217218 24.924273516474692 31.736311239193082 15 25.19450219038017 27.45703999785869 22.099530696549817 25.248927115211323 16 25.741762653795025 25.536553920825117 23.95455072670658 24.76713269867328 17 24.051913348381973 25.905148954773782 25.32721870789875 24.715718988945497 18 25.154910288095216 24.42775760387577 26.494231850179776 23.923100257849235 19 25.628228691749715 24.891261676823014 25.258629919433268 24.221879711994003 20 25.739755177059447 24.19410961715188 25.19439066389486 24.871744541893808 21 26.948955386010326 24.24030861643434 24.187556530050287 24.62317946750505 22 25.629009377146883 24.632966336845673 24.95405108805239 24.78397319795505 23 24.16173625013244 24.165416636461476 25.572885590172252 26.099961523233834 24 24.715830515430802 25.171527734406368 25.31472774154406 24.797914008618765 25 24.938995012535578 24.45965417867435 25.279596898671496 25.321753910118577 26 24.433556981111877 25.4722031388014 25.756595676341217 24.337644203745505 27 25.386885377539457 24.64478814428851 24.921819933797877 25.046506544374157 28 24.355599967880373 24.58545605410373 25.75971841792989 25.299225560086008 29 24.374559470383026 24.718284098107617 25.711650502761398 25.19550592874796 30 24.428984395214176 24.984497818541946 25.956228085045634 24.63028970119824 31 25.12435203112035 24.711815561959654 24.706685343635407 25.45714706328459 32 24.627501539065495 24.99230467251363 24.724641107770275 25.6555526806506 33 24.31110090024179 24.494785021546917 25.558636164916443 25.635477913294853 34 25.251157644917516 24.636535184375585 25.643953926178387 24.468353244528508 35 25.78313897984493 24.57341119369028 25.517036785895915 24.126413040568874 36 24.527127702286737 25.26119502859539 25.046283491403535 25.16539377771433 37 25.441087249399985 25.026766356474333 24.932861055843542 24.599285338282133 38 24.63742739625806 24.74650029889098 25.453355162784057 25.1627171420669 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 102.0 1 99.0 2 96.0 3 96.0 4 308.0 5 520.0 6 520.0 7 609.5 8 699.0 9 692.0 10 685.0 11 685.0 12 848.5 13 1012.0 14 1390.5 15 1769.0 16 1769.0 17 2717.5 18 3666.0 19 3666.0 20 4410.5 21 5155.0 22 5758.0 23 6361.0 24 6361.0 25 7785.0 26 9209.0 27 9209.0 28 11799.5 29 14390.0 30 17683.5 31 20977.0 32 20977.0 33 27127.5 34 33278.0 35 33278.0 36 36631.0 37 39984.0 38 45134.0 39 50284.0 40 50284.0 41 53355.5 42 56427.0 43 63120.0 44 69813.0 45 69813.0 46 72182.0 47 74551.0 48 74551.0 49 78883.0 50 83215.0 51 83560.0 52 83905.0 53 83905.0 54 80208.5 55 76512.0 56 76512.0 57 74100.0 58 71688.0 59 63957.5 60 56227.0 61 56227.0 62 53351.0 63 50475.0 64 41526.5 65 32578.0 66 32578.0 67 27166.0 68 21754.0 69 21754.0 70 17365.5 71 12977.0 72 10016.5 73 7056.0 74 7056.0 75 5235.0 76 3414.0 77 3414.0 78 3396.0 79 3378.0 80 2638.0 81 1898.0 82 1898.0 83 1820.0 84 1742.0 85 1742.0 86 1099.0 87 456.0 88 372.5 89 289.0 90 289.0 91 175.0 92 61.0 93 43.5 94 26.0 95 26.0 96 17.5 97 9.0 98 9.0 99 9.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.008810592339468777 2 0.0 3 0.0 4 2.230529706194627E-4 5 0.0 6 1.1152648530973136E-4 7 6.691589118583882E-4 8 0.002565109162123821 9 0.0037919005005308663 10 0.0012267913384070449 11 0.0032342680739822095 12 0.0 13 1.1152648530973136E-4 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 1.1152648530973136E-4 22 0.0 23 3.345794559291941E-4 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 38 896648.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.306684344616656 #Duplication Level Percentage of deduplicated Percentage of total 1 82.62161994718585 48.17392714301449 2 11.266097185289013 13.137775447568414 3 2.7434813961486384 4.798899113117006 4 1.1330630014357974 2.6426058706912388 5 0.5820551578726668 1.6968853180618804 6 0.35224042983136866 1.2322782933353824 7 0.22110796312687664 0.9024450548483955 8 0.16716495119322436 0.7797467234165266 9 0.11472831999077576 0.6020485145181302 >10 0.6199994900623661 6.854881057053736 >50 0.07776929613396309 3.200480464412875 >100 0.08950837613915594 10.838777372092276 >500 0.00904708315076191 3.598484856273377 >1k 0.0021174024395400216 1.5407647715963109 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTT 2030 0.22639876517875465 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTT 1547 0.1725314727741544 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGC 1239 0.13818131529875716 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCG 1215 0.1355046796513236 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAAT 1209 0.1348355207394652 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 1131 0.12613645488530617 No Hit GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAAC 1128 0.12580187542937696 No Hit GAACTACGACGGTATCTGATCGTCTTCGAACCTCCGAC 1106 0.12334829275256287 No Hit CTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGA 1062 0.11844112739893471 No Hit GAATAACGCCGCCGCATCGCCAGTCGGCATCGTTTATG 1059 0.11810654794300551 No Hit GTATCTGATCGTCTTCGAACCTCCGACTTTCGTTCTTG 1002 0.11174953828035081 No Hit ATCAGATACCGTCGTAGTTCCGACCATAAACGATGCCG 967 0.10784611129451022 No Hit ATATTAAAGTTGCTGCAGTTAAAAAGCTCGTAGTTGGA 935 0.10427726376459881 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 1.1152648530973136E-4 0.0 0.0 10 0.0 0.0 1.1152648530973136E-4 0.0 0.0 11 0.0 0.0 1.1152648530973136E-4 0.0 0.0 12 0.0 0.0 1.1152648530973136E-4 0.0 0.0 13 0.0 0.0 1.1152648530973136E-4 0.0 0.0 14 0.0 0.0 1.1152648530973136E-4 0.0 0.0 15 0.0 0.0 1.1152648530973136E-4 0.0 0.0 16 0.0 0.0 1.1152648530973136E-4 0.0 0.0 17 0.0 0.0 1.1152648530973136E-4 1.1152648530973136E-4 0.0 18 0.0 0.0 1.1152648530973136E-4 2.230529706194627E-4 0.0 19 0.0 0.0 1.1152648530973136E-4 3.345794559291941E-4 0.0 20 0.0 0.0 1.1152648530973136E-4 5.576324265486568E-4 1.1152648530973136E-4 21 0.0 0.0 1.1152648530973136E-4 6.691589118583882E-4 1.1152648530973136E-4 22 0.0 0.0 1.1152648530973136E-4 8.922118824778508E-4 1.1152648530973136E-4 23 0.0 0.0 1.1152648530973136E-4 0.001561370794336239 1.1152648530973136E-4 24 0.0 0.0 1.1152648530973136E-4 0.0020074767355751644 1.1152648530973136E-4 25 0.0 0.0 1.1152648530973136E-4 0.0024535826768140897 1.1152648530973136E-4 26 0.0 0.0 1.1152648530973136E-4 0.003122741588672478 1.1152648530973136E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCTAGCG 225 0.0 22.043255 28 CTAGCGG 230 0.0 20.868439 29 GTATTAG 205 0.0 17.953253 1 TAGCGGC 280 0.0 17.141932 30 ATTACAC 95 7.68312E-7 16.843075 3 ACCGTCG 210 0.0 16.763803 8 AGCGGCG 300 0.0 16.53244 31 ATTAGCT 155 1.0913936E-11 16.517078 3 AGGGGCG 205 0.0 16.389359 32 TACCGTC 225 0.0 16.357409 7 TAGGACG 275 0.0 16.292755 4 TATACTG 130 4.78758E-9 16.001814 5 ATACCGT 245 0.0 15.675245 6 CATCGTT 235 0.0 15.658728 28 AGCCTAT 75 6.237092E-4 14.935025 6 AGGACGT 290 0.0 14.898239 5 CGTTTAT 215 0.0 14.882916 31 CGAAAAC 270 0.0 14.81484 23 AAATTCG 65 0.004160581 14.769257 21 TCTAGAT 240 0.0 14.666693 2 >>END_MODULE